RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 FGFR1OPO95684 399 aaKnown RBP14□□□□□ -0.17
SDF4-203ENST00000403997 EIF2DP41214 584 aaKnown RBP14□□□□□ -0.17
SDF4-203ENST00000403997 PLA2G4AP47712 749 aa14□□□□□ -0.17
SDF4-203ENST00000403997 DMC1Q14565 340 aa14□□□□□ -0.17
SDF4-203ENST00000403997 ANO4Q32M45 955 aa14□□□□□ -0.17
SDF4-203ENST00000403997 LAIR1Q6GTX8 287 aa14□□□□□ -0.17
SDF4-203ENST00000403997 KLHDC10Q6PID8 442 aa14□□□□□ -0.17
SDF4-203ENST00000403997 HTR3DQ70Z44 454 aa14□□□□□ -0.17
SDF4-203ENST00000403997 C12orf40Q86WS4 652 aa14□□□□□ -0.17
SDF4-203ENST00000403997 TTC30AQ86WT1 665 aa14□□□□□ -0.17
SDF4-203ENST00000403997 TMEM25Q86YD3 366 aa14□□□□□ -0.17
SDF4-203ENST00000403997 CREBRFQ8IUR6 639 aa14□□□□□ -0.17
SDF4-203ENST00000403997 PPM1KQ8N3J5 372 aa14□□□□□ -0.17
SDF4-203ENST00000403997 CAMKK1Q8N5S9 505 aa14□□□□□ -0.17
SDF4-203ENST00000403997 NAT16Q8N8M0 369 aa14□□□□□ -0.17
SDF4-203ENST00000403997 TRIML1Q8N9V2 468 aa14□□□□□ -0.17
SDF4-203ENST00000403997 UBA3Q8TBC4 463 aa14□□□□□ -0.17
SDF4-203ENST00000403997 USP33Q8TEY7 942 aa14□□□□□ -0.17
SDF4-203ENST00000403997 HHIPQ96QV1 700 aa14□□□□□ -0.17
SDF4-203ENST00000403997 ARHGEF4Q9NR80 690 aa14□□□□□ -0.17
SDF4-203ENST00000403997 SPHK2Q9NRA0 654 aa14□□□□□ -0.17
SDF4-203ENST00000403997 HESX1Q9UBX0 185 aa14□□□□□ -0.17
SDF4-203ENST00000403997 LSM7Q9UK45 103 aaKnown RBP14□□□□□ -0.17
SDF4-203ENST00000403997 TSPAN16Q9UKR8 245 aa14□□□□□ -0.17
SDF4-203ENST00000403997 KIAA1257Q9ULG3 409 aa14□□□□□ -0.17
SDF4-203ENST00000403997 PCDHB4Q9Y5E5 795 aa14□□□□□ -0.17
SDF4-203ENST00000403997 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14□□□□□ -0.17
SDF4-203ENST00000403997 SDK1Q7Z5N4 2213 aa13.99□□□□□ -0.17
SDF4-203ENST00000403997 CCDC163A0A0D9SF12 145 aa13.99□□□□□ -0.17
SDF4-203ENST00000403997 ANTXRLA6NF34 631 aa13.99□□□□□ -0.17
SDF4-203ENST00000403997 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.99□□□□□ -0.17
SDF4-203ENST00000403997 AXIN1O15169 862 aa13.99□□□□□ -0.17
SDF4-203ENST00000403997 HOXC11O43248 304 aaPredicted RBP13.99□□□□□ -0.17
SDF4-203ENST00000403997 KAT7O95251 611 aa13.99□□□□□ -0.17
SDF4-203ENST00000403997 CCDC192P0DO97 292 aa13.99□□□□□ -0.17
SDF4-203ENST00000403997 VDRP11473 427 aa13.99□□□□□ -0.17
SDF4-203ENST00000403997 ID4P47928 161 aa13.99□□□□□ -0.17
SDF4-203ENST00000403997 TKTL1P51854 596 aa13.99□□□□□ -0.17
SDF4-203ENST00000403997 BCAT1P54687 386 aa13.99□□□□□ -0.17
SDF4-203ENST00000403997 KDSRQ06136 332 aa13.99□□□□□ -0.17
SDF4-203ENST00000403997 PDE4CQ08493 712 aa13.99□□□□□ -0.17
SDF4-203ENST00000403997 MESP2Q0VG99 397 aa13.99□□□□□ -0.17
SDF4-203ENST00000403997 BST2Q10589 180 aaKnown RBP13.99□□□□□ -0.17
SDF4-203ENST00000403997 KCNH2Q12809 1159 aa13.99□□□□□ -0.17
SDF4-203ENST00000403997 TMEM270Q6UE05 265 aa13.99□□□□□ -0.17
SDF4-203ENST00000403997 MIB1Q86YT6 1006 aa13.99□□□□□ -0.17
SDF4-203ENST00000403997 SFTPA1Q8IWL2 248 aa13.99□□□□□ -0.17
SDF4-203ENST00000403997 TRIM59Q8IWR1 403 aa13.99□□□□□ -0.17
SDF4-203ENST00000403997 ARHGAP18Q8N392 663 aa13.99□□□□□ -0.17
SDF4-203ENST00000403997 ZNF276Q8N554 614 aa13.99□□□□□ -0.17
SDF4-203ENST00000403997 CCDC33Q8N5R6 958 aa13.99□□□□□ -0.17
SDF4-203ENST00000403997 GPR161Q8N6U8 529 aaKnown RBP13.99□□□□□ -0.17
SDF4-203ENST00000403997 EHBP1Q8NDI1 1231 aa13.99□□□□□ -0.17
SDF4-203ENST00000403997 LMO3Q8TAP4 145 aa13.99□□□□□ -0.17
SDF4-203ENST00000403997 CDK5RAP1Q96SZ6 601 aaKnown RBP13.99□□□□□ -0.17
SDF4-203ENST00000403997 LRRC4Q9HBW1 653 aa13.99□□□□□ -0.17
SDF4-203ENST00000403997 CLIC5Q9NZA1 410 aa13.99□□□□□ -0.17
SDF4-203ENST00000403997 SPTBN4Q9H254 2564 aa13.98□□□□□ -0.17
SDF4-203ENST00000403997 TBC1D3BA6NDS4 549 aa13.98□□□□□ -0.17
SDF4-203ENST00000403997 TULP2O00295 520 aa13.98□□□□□ -0.17
SDF4-203ENST00000403997 XPO1O14980 1071 aaKnown RBP13.98□□□□□ -0.17
SDF4-203ENST00000403997 GREM1O60565 184 aa13.98□□□□□ -0.17
SDF4-203ENST00000403997 RPP40O75818 363 aaKnown RBP13.98□□□□□ -0.17
SDF4-203ENST00000403997 APBB3O95704 486 aa13.98□□□□□ -0.17
SDF4-203ENST00000403997 ZBED1O96006 694 aa13.98□□□□□ -0.17
SDF4-203ENST00000403997 AFPP02771 609 aaKnown RBP13.98□□□□□ -0.17
SDF4-203ENST00000403997 RETP07949 1114 aa13.98□□□□□ -0.17
SDF4-203ENST00000403997 PAEPP09466 180 aa13.98□□□□□ -0.17
SDF4-203ENST00000403997 TIE1P35590 1138 aa13.98□□□□□ -0.17
SDF4-203ENST00000403997 ANP32AP39687 249 aaKnown RBP13.98□□□□□ -0.17
SDF4-203ENST00000403997 GRIA2P42262 883 aa13.98□□□□□ -0.17
SDF4-203ENST00000403997 TNFRSF4P43489 277 aa13.98□□□□□ -0.17
SDF4-203ENST00000403997 MARSP56192 900 aaKnown RBP13.98□□□□□ -0.17
SDF4-203ENST00000403997 YWHAGP61981 247 aaKnown RBP eCLIP13.98□□□□□ -0.17
SDF4-203ENST00000403997 MRPS21P82921 87 aaKnown RBP13.98□□□□□ -0.17
SDF4-203ENST00000403997 PREPLQ4J6C6 727 aaPredicted RBP13.98□□□□□ -0.17
SDF4-203ENST00000403997 RAB41Q5JT25 222 aa13.98□□□□□ -0.17
SDF4-203ENST00000403997 TPGS1Q6ZTW0 290 aa13.98□□□□□ -0.17
SDF4-203ENST00000403997 RSRC2Q7L4I2 434 aaKnown RBP13.98□□□□□ -0.17
SDF4-203ENST00000403997 RRAGAQ7L523 313 aa13.98□□□□□ -0.17
SDF4-203ENST00000403997 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.98□□□□□ -0.17
SDF4-203ENST00000403997 UBR7Q8N806 425 aa13.98□□□□□ -0.17
SDF4-203ENST00000403997 GAB3Q8WWW8 586 aa13.98□□□□□ -0.17
SDF4-203ENST00000403997 NDRG1Q92597 394 aaKnown RBP13.98□□□□□ -0.17
SDF4-203ENST00000403997 KAT5Q92993 513 aa13.98□□□□□ -0.17
SDF4-203ENST00000403997 ULBP1Q9BZM6 244 aa13.98□□□□□ -0.17
SDF4-203ENST00000403997 DEC1Q9P2X7 70 aa13.98□□□□□ -0.17
SDF4-203ENST00000403997 RWDD2AQ9UIY3 292 aa13.98□□□□□ -0.17
SDF4-203ENST00000403997 RASAL2Q9UJF2 1139 aa13.98□□□□□ -0.17
SDF4-203ENST00000403997 USP18Q9UMW8 372 aa13.98□□□□□ -0.17
SDF4-203ENST00000403997 WDR87Q6ZQQ6 2873 aa13.97□□□□□ -0.17
SDF4-203ENST00000403997 A0A0A0MRY4 1105 aa13.97□□□□□ -0.17
SDF4-203ENST00000403997 NEDD8-MDP1E9PL57 170 aa13.97□□□□□ -0.17
SDF4-203ENST00000403997 RNF225M0QZC1 329 aaPredicted RBP13.97□□□□□ -0.17
SDF4-203ENST00000403997 O00370 1275 aa13.97□□□□□ -0.17
SDF4-203ENST00000403997 TULP3O75386 442 aa13.97□□□□□ -0.17
SDF4-203ENST00000403997 STC2O76061 302 aa13.97□□□□□ -0.17
SDF4-203ENST00000403997 KLF8O95600 359 aaPredicted RBP13.97□□□□□ -0.17
SDF4-203ENST00000403997 HMBSP08397 361 aa13.97□□□□□ -0.17
SDF4-203ENST00000403997 DGKEP52429 567 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms