RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 CDK4P11802 303 aa9.89□□□□□ -0.83
NUP43-204ENST00000403890 FDPSP14324 419 aaKnown RBP9.89□□□□□ -0.83
NUP43-204ENST00000403890 ACAT1P24752 427 aaKnown RBP9.89□□□□□ -0.83
NUP43-204ENST00000403890 MAGEA11P43364 429 aa9.89□□□□□ -0.83
NUP43-204ENST00000403890 RPIAP49247 311 aa9.89□□□□□ -0.83
NUP43-204ENST00000403890 CSNK1EP49674 416 aaKnown RBP9.89□□□□□ -0.83
NUP43-204ENST00000403890 AFF3P51826 1226 aaKnown RBP9.89□□□□□ -0.83
NUP43-204ENST00000403890 MYL7Q01449 175 aa9.89□□□□□ -0.83
NUP43-204ENST00000403890 RAD51AP2Q09MP3 1159 aa9.89□□□□□ -0.83
NUP43-204ENST00000403890 CCDC173Q0VFZ6 552 aa9.89□□□□□ -0.83
NUP43-204ENST00000403890 KCNH2Q12809 1159 aa9.89□□□□□ -0.83
NUP43-204ENST00000403890 TARDBPQ13148 414 aaKnown RBP eCLIP9.89□□□□□ -0.83
NUP43-204ENST00000403890 ORC2Q13416 577 aaPredicted RBP9.89□□□□□ -0.83
NUP43-204ENST00000403890 KIF19Q2TAC6 998 aa9.89□□□□□ -0.83
NUP43-204ENST00000403890 SPACA3Q8IXA5 215 aa9.89□□□□□ -0.83
NUP43-204ENST00000403890 TMEM86AQ8N2M4 240 aa9.89□□□□□ -0.83
NUP43-204ENST00000403890 C1orf216Q8TAB5 229 aa9.89□□□□□ -0.83
NUP43-204ENST00000403890 SNX29Q8TEQ0 813 aa9.89□□□□□ -0.83
NUP43-204ENST00000403890 CEP295NLQ96MC4 621 aa9.89□□□□□ -0.83
NUP43-204ENST00000403890 ZNF560Q96MR9 790 aa9.89□□□□□ -0.83
NUP43-204ENST00000403890 MSTO1Q9BUK6 570 aa9.89□□□□□ -0.83
NUP43-204ENST00000403890 SEMA4CQ9C0C4 833 aa9.89□□□□□ -0.83
NUP43-204ENST00000403890 ITM2CQ9NQX7 267 aa9.89□□□□□ -0.83
NUP43-204ENST00000403890 PDRG1Q9NUG6 133 aa9.89□□□□□ -0.83
NUP43-204ENST00000403890 USP36Q9P275 1121 aaKnown RBP9.89□□□□□ -0.83
NUP43-204ENST00000403890 SNX11Q9Y5W9 270 aa9.89□□□□□ -0.83
NUP43-204ENST00000403890 RAD54BQ9Y620 910 aa9.89□□□□□ -0.83
NUP43-204ENST00000403890 NOTCH2Q04721 2471 aa9.89□□□□□ -0.83
NUP43-204ENST00000403890 SPTAN1Q13813 2472 aaKnown RBP9.89□□□□□ -0.83
NUP43-204ENST00000403890 COL12A1Q99715 3063 aa9.88□□□□□ -0.83
NUP43-204ENST00000403890 GFRA2O00451 464 aa9.88□□□□□ -0.83
NUP43-204ENST00000403890 TRIM24O15164 1050 aa9.88□□□□□ -0.83
NUP43-204ENST00000403890 PFKFB2O60825 505 aa9.88□□□□□ -0.83
NUP43-204ENST00000403890 HUS1O60921 280 aa9.88□□□□□ -0.83
NUP43-204ENST00000403890 CD2BP2O95400 341 aaKnown RBP9.88□□□□□ -0.83
NUP43-204ENST00000403890 OAS1P00973 400 aaKnown RBP9.88□□□□□ -0.83
NUP43-204ENST00000403890 C1SP09871 688 aa9.88□□□□□ -0.83
NUP43-204ENST00000403890 MBL2P11226 248 aaPredicted RBP9.88□□□□□ -0.83
NUP43-204ENST00000403890 PCSK1P29120 753 aa9.88□□□□□ -0.83
NUP43-204ENST00000403890 OXTRP30559 389 aa9.88□□□□□ -0.83
NUP43-204ENST00000403890 ACTN2P35609 894 aa9.88□□□□□ -0.83
NUP43-204ENST00000403890 PNPLA4P41247 253 aa9.88□□□□□ -0.83
NUP43-204ENST00000403890 TRIM29Q14134 588 aa9.88□□□□□ -0.83
NUP43-204ENST00000403890 LY6DQ14210 128 aa9.88□□□□□ -0.83
NUP43-204ENST00000403890 TEAD4Q15561 434 aa9.88□□□□□ -0.83
NUP43-204ENST00000403890 ANO4Q32M45 955 aa9.88□□□□□ -0.83
NUP43-204ENST00000403890 INAVAQ3KP66 663 aa9.88□□□□□ -0.83
NUP43-204ENST00000403890 GRAMD4Q6IC98 578 aa9.88□□□□□ -0.83
NUP43-204ENST00000403890 VSTM1Q6UX27 236 aa9.88□□□□□ -0.83
NUP43-204ENST00000403890 C4orf50Q6ZRC1 276 aa9.88□□□□□ -0.83
NUP43-204ENST00000403890 DENND5BQ6ZUT9 1274 aa9.88□□□□□ -0.83
NUP43-204ENST00000403890 TMEM25Q86YD3 366 aa9.88□□□□□ -0.83
NUP43-204ENST00000403890 SCFD1Q8WVM8 642 aa9.88□□□□□ -0.83
NUP43-204ENST00000403890 IGSF8Q969P0 613 aa9.88□□□□□ -0.83
NUP43-204ENST00000403890 TTLL2Q9BWV7 592 aa9.88□□□□□ -0.83
NUP43-204ENST00000403890 TM6SF1Q9BZW5 370 aa9.88□□□□□ -0.83
NUP43-204ENST00000403890 SPHK2Q9NRA0 654 aa9.88□□□□□ -0.83
NUP43-204ENST00000403890 LARSQ9P2J5 1176 aaKnown RBP9.88□□□□□ -0.83
NUP43-204ENST00000403890 MAGEC2Q9UBF1 373 aaPredicted RBP9.88□□□□□ -0.83
NUP43-204ENST00000403890 L1RE1Q9UN81 338 aa9.88□□□□□ -0.83
NUP43-204ENST00000403890 AHCTF1Q8WYP5 2266 aa9.87□□□□□ -0.83
NUP43-204ENST00000403890 DOPEY2Q9Y3R5 2298 aa9.87□□□□□ -0.83
NUP43-204ENST00000403890 WASH3PC4AMC7 463 aa9.87□□□□□ -0.83
NUP43-204ENST00000403890 KCNK3O14649 394 aa9.87□□□□□ -0.83
NUP43-204ENST00000403890 PIGRP01833 764 aa9.87□□□□□ -0.83
NUP43-204ENST00000403890 GRIK1P39086 918 aa9.87□□□□□ -0.83
NUP43-204ENST00000403890 LHX1P48742 406 aa9.87□□□□□ -0.83
NUP43-204ENST00000403890 ACOT2P49753 483 aa9.87□□□□□ -0.83
NUP43-204ENST00000403890 CCT8P50990 548 aa9.87□□□□□ -0.83
NUP43-204ENST00000403890 TPMTP51580 245 aa9.87□□□□□ -0.83
NUP43-204ENST00000403890 CLDN6P56747 220 aa9.87□□□□□ -0.83
NUP43-204ENST00000403890 USP46P62068 366 aa9.87□□□□□ -0.83
NUP43-204ENST00000403890 CCDC142Q17RM4 750 aa9.87□□□□□ -0.83
NUP43-204ENST00000403890 FUT11Q495W5 492 aa9.87□□□□□ -0.83
NUP43-204ENST00000403890 KRT79Q5XKE5 535 aa9.87□□□□□ -0.83
NUP43-204ENST00000403890 FAM171BQ6P995 826 aa9.87□□□□□ -0.83
NUP43-204ENST00000403890 KRI1Q8N9T8 703 aaKnown RBP9.87□□□□□ -0.83
NUP43-204ENST00000403890 KCNN1Q92952 543 aa9.87□□□□□ -0.83
NUP43-204ENST00000403890 LGMNQ99538 433 aa9.87□□□□□ -0.83
NUP43-204ENST00000403890 NUP58Q9BVL2 599 aa9.87□□□□□ -0.83
NUP43-204ENST00000403890 RAB34Q9BZG1 259 aa9.87□□□□□ -0.83
NUP43-204ENST00000403890 DNAJC17Q9NVM6 304 aaKnown RBP9.87□□□□□ -0.83
NUP43-204ENST00000403890 IL17BQ9UHF5 180 aa9.87□□□□□ -0.83
NUP43-204ENST00000403890 ANKRD6Q9Y2G4 727 aa9.87□□□□□ -0.83
NUP43-204ENST00000403890 MYO9AB2RTY4 2548 aa9.87□□□□□ -0.83
NUP43-204ENST00000403890 KCNJ18B7U540 433 aa9.86□□□□□ -0.83
NUP43-204ENST00000403890 PRRT4C9JH25 899 aa9.86□□□□□ -0.83
NUP43-204ENST00000403890 H0Y8X5 98 aa9.86□□□□□ -0.83
NUP43-204ENST00000403890 ENC1O14682 589 aa9.86□□□□□ -0.83
NUP43-204ENST00000403890 GABRDO14764 452 aa9.86□□□□□ -0.83
NUP43-204ENST00000403890 TRIM66O15016 1216 aa9.86□□□□□ -0.83
NUP43-204ENST00000403890 DFNA5O60443 496 aa9.86□□□□□ -0.83
NUP43-204ENST00000403890 BRINP1O60477 761 aa9.86□□□□□ -0.83
NUP43-204ENST00000403890 REC8O95072 547 aa9.86□□□□□ -0.83
NUP43-204ENST00000403890 SCP2P22307 547 aa9.86□□□□□ -0.83
NUP43-204ENST00000403890 BDNFP23560 247 aa9.86□□□□□ -0.83
NUP43-204ENST00000403890 ANXA13P27216 316 aa9.86□□□□□ -0.83
NUP43-204ENST00000403890 UCNP55089 124 aa9.86□□□□□ -0.83
NUP43-204ENST00000403890 NCKAP1LP55160 1127 aa9.86□□□□□ -0.83
NUP43-204ENST00000403890 TMPRSS3P57727 454 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms