RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 SMG1Q96Q15 3661 aaKnown RBP12.63□□□□□ -0.39
LINC00544-201ENST00000400540 ATP8B3O60423 1300 aa12.62□□□□□ -0.39
LINC00544-201ENST00000400540 IGHV1OR15-9A0A0B4J2B8 117 aa12.62□□□□□ -0.39
LINC00544-201ENST00000400540 FAM92AA1XBS5 289 aa12.62□□□□□ -0.39
LINC00544-201ENST00000400540 SRRM3A6NNA2 597 aaPredicted RBP12.62□□□□□ -0.39
LINC00544-201ENST00000400540 LRRIQ3A6PVS8 624 aaPredicted RBP12.62□□□□□ -0.39
LINC00544-201ENST00000400540 NEDD8-MDP1E9PL57 170 aa12.62□□□□□ -0.39
LINC00544-201ENST00000400540 AP5Z1O43299 807 aa12.62□□□□□ -0.39
LINC00544-201ENST00000400540 STX6O43752 255 aa12.62□□□□□ -0.39
LINC00544-201ENST00000400540 GREM1O60565 184 aa12.62□□□□□ -0.39
LINC00544-201ENST00000400540 VNN1O95497 513 aa12.62□□□□□ -0.39
LINC00544-201ENST00000400540 TBX18O95935 607 aa12.62□□□□□ -0.39
LINC00544-201ENST00000400540 NDUFV2P19404 249 aa12.62□□□□□ -0.39
LINC00544-201ENST00000400540 ATICP31939 592 aa12.62□□□□□ -0.39
LINC00544-201ENST00000400540 TUBP50607 506 aa12.62□□□□□ -0.39
LINC00544-201ENST00000400540 SEMA3BQ13214 749 aa12.62□□□□□ -0.39
LINC00544-201ENST00000400540 BIRC3Q13489 604 aa12.62□□□□□ -0.39
LINC00544-201ENST00000400540 BMT2Q1RMZ1 405 aa12.62□□□□□ -0.39
LINC00544-201ENST00000400540 ZNF667Q5HYK9 610 aa12.62□□□□□ -0.39
LINC00544-201ENST00000400540 SPDYCQ5MJ68 293 aa12.62□□□□□ -0.39
LINC00544-201ENST00000400540 TOGARAM2Q6ZUX3 1019 aa12.62□□□□□ -0.39
LINC00544-201ENST00000400540 GPRIN1Q7Z2K8 1008 aa12.62□□□□□ -0.39
LINC00544-201ENST00000400540 SLC41A1Q8IVJ1 513 aa12.62□□□□□ -0.39
LINC00544-201ENST00000400540 C12orf56Q8IXR9 622 aa12.62□□□□□ -0.39
LINC00544-201ENST00000400540 GRAMD1CQ8IYS0 662 aa12.62□□□□□ -0.39
LINC00544-201ENST00000400540 ZCCHC14Q8WYQ9 949 aaKnown RBP12.62□□□□□ -0.39
LINC00544-201ENST00000400540 NACA2Q9H009 215 aa12.62□□□□□ -0.39
LINC00544-201ENST00000400540 CUEDC2Q9H467 287 aa12.62□□□□□ -0.39
LINC00544-201ENST00000400540 ZSCAN16Q9H4T2 348 aaPredicted RBP12.62□□□□□ -0.39
LINC00544-201ENST00000400540 SLC32A1Q9H598 525 aa12.62□□□□□ -0.39
LINC00544-201ENST00000400540 VRTNQ9H8Y1 702 aa12.62□□□□□ -0.39
LINC00544-201ENST00000400540 CAPN10Q9HC96 672 aa12.62□□□□□ -0.39
LINC00544-201ENST00000400540 CD248Q9HCU0 757 aa12.62□□□□□ -0.39
LINC00544-201ENST00000400540 DNAJC17Q9NVM6 304 aaKnown RBP12.62□□□□□ -0.39
LINC00544-201ENST00000400540 CYP8B1Q9UNU6 501 aa12.62□□□□□ -0.39
LINC00544-201ENST00000400540 RAD54BQ9Y620 910 aa12.62□□□□□ -0.39
LINC00544-201ENST00000400540 ADAMTS20P59510 1910 aa12.62□□□□□ -0.39
LINC00544-201ENST00000400540 MUC22E2RYF6 1773 aaPredicted RBP12.61□□□□□ -0.39
LINC00544-201ENST00000400540 ANKRD11Q6UB99 2663 aaPredicted RBP12.61□□□□□ -0.39
LINC00544-201ENST00000400540 PRRT4C9JH25 899 aa12.61□□□□□ -0.39
LINC00544-201ENST00000400540 POLR2DO15514 142 aaKnown RBP12.61□□□□□ -0.39
LINC00544-201ENST00000400540 TLR5O60602 858 aa12.61□□□□□ -0.39
LINC00544-201ENST00000400540 EXOC3O60645 756 aa12.61□□□□□ -0.39
LINC00544-201ENST00000400540 PPP6R2O75170 966 aa12.61□□□□□ -0.39
LINC00544-201ENST00000400540 NTSR1P30989 418 aa12.61□□□□□ -0.39
LINC00544-201ENST00000400540 MAP3K7CLP57077 242 aa12.61□□□□□ -0.39
LINC00544-201ENST00000400540 DLG4P78352 724 aa12.61□□□□□ -0.39
LINC00544-201ENST00000400540 SIM1P81133 766 aaPredicted RBP12.61□□□□□ -0.39
LINC00544-201ENST00000400540 AMPD3Q01432 767 aa12.61□□□□□ -0.39
LINC00544-201ENST00000400540 ZNF33AQ06730 810 aa12.61□□□□□ -0.39
LINC00544-201ENST00000400540 CUL4BQ13620 913 aa12.61□□□□□ -0.39
LINC00544-201ENST00000400540 NCOA4Q13772 614 aa12.61□□□□□ -0.39
LINC00544-201ENST00000400540 BYSLQ13895 437 aaKnown RBP12.61□□□□□ -0.39
LINC00544-201ENST00000400540 DUOXA1Q1HG43 343 aa12.61□□□□□ -0.39
LINC00544-201ENST00000400540 GRAMD4Q6IC98 578 aa12.61□□□□□ -0.39
LINC00544-201ENST00000400540 TPGS1Q6ZTW0 290 aa12.61□□□□□ -0.39
LINC00544-201ENST00000400540 TRMT11Q7Z4G4 463 aaKnown RBP12.61□□□□□ -0.39
LINC00544-201ENST00000400540 MINDY1Q8N5J2 469 aa12.61□□□□□ -0.39
LINC00544-201ENST00000400540 IQUBQ8NA54 791 aa12.61□□□□□ -0.39
LINC00544-201ENST00000400540 SLC2A14Q8TDB8 520 aa12.61□□□□□ -0.39
LINC00544-201ENST00000400540 IPO4Q8TEX9 1081 aaKnown RBP12.61□□□□□ -0.39
LINC00544-201ENST00000400540 JAKMIP2Q96AA8 810 aa12.61□□□□□ -0.39
LINC00544-201ENST00000400540 P2RY11Q96G91 374 aa12.61□□□□□ -0.39
LINC00544-201ENST00000400540 DUSP9Q99956 384 aaKnown RBP12.61□□□□□ -0.39
LINC00544-201ENST00000400540 KLF16Q9BXK1 252 aaPredicted RBP12.61□□□□□ -0.39
LINC00544-201ENST00000400540 FAM49BQ9NUQ9 324 aa12.61□□□□□ -0.39
LINC00544-201ENST00000400540 OSER1Q9NX31 292 aa12.61□□□□□ -0.39
LINC00544-201ENST00000400540 SLC6A14Q9UN76 642 aa12.61□□□□□ -0.39
LINC00544-201ENST00000400540 NEUROG3Q9Y4Z2 214 aa12.61□□□□□ -0.39
LINC00544-201ENST00000400540 TMEM8BA6NDV4 472 aa12.6□□□□□ -0.39
LINC00544-201ENST00000400540 MDM4O15151 490 aa12.6□□□□□ -0.39
LINC00544-201ENST00000400540 CYP26A1O43174 497 aa12.6□□□□□ -0.39
LINC00544-201ENST00000400540 CACNG3O60359 315 aa12.6□□□□□ -0.39
LINC00544-201ENST00000400540 CUTAO60888 179 aa12.6□□□□□ -0.39
LINC00544-201ENST00000400540 C4BPAP04003 597 aaKnown RBP12.6□□□□□ -0.39
LINC00544-201ENST00000400540 SERPINF2P08697 491 aa12.6□□□□□ -0.39
LINC00544-201ENST00000400540 TYRP14679 529 aa12.6□□□□□ -0.39
LINC00544-201ENST00000400540 HOXD12P35452 270 aa12.6□□□□□ -0.39
LINC00544-201ENST00000400540 AFMP43652 599 aa12.6□□□□□ -0.39
LINC00544-201ENST00000400540 NDST1P52848 882 aa12.6□□□□□ -0.39
LINC00544-201ENST00000400540 ATXN3P54252 364 aaPredicted RBP12.6□□□□□ -0.39
LINC00544-201ENST00000400540 SNRPFP62306 86 aaKnown RBP12.6□□□□□ -0.39
LINC00544-201ENST00000400540 GFPT1Q06210 699 aaPredicted RBP12.6□□□□□ -0.39
LINC00544-201ENST00000400540 KNOP1Q1ED39 458 aaKnown RBP12.6□□□□□ -0.39
LINC00544-201ENST00000400540 FOXD4L6Q3SYB3 417 aaPredicted RBP12.6□□□□□ -0.39
LINC00544-201ENST00000400540 FOXD4L5Q5VV16 416 aaPredicted RBP12.6□□□□□ -0.39
LINC00544-201ENST00000400540 SPOPLQ6IQ16 392 aa12.6□□□□□ -0.39
LINC00544-201ENST00000400540 FOXD4L3Q6VB84 417 aaPredicted RBP12.6□□□□□ -0.39
LINC00544-201ENST00000400540 SLC36A4Q6YBV0 504 aa12.6□□□□□ -0.39
LINC00544-201ENST00000400540 CHPFQ8IZ52 775 aa12.6□□□□□ -0.39
LINC00544-201ENST00000400540 HDDC3Q8N4P3 179 aa12.6□□□□□ -0.39
LINC00544-201ENST00000400540 C12orf29Q8N999 325 aa12.6□□□□□ -0.39
LINC00544-201ENST00000400540 KCNV2Q8TDN2 545 aa12.6□□□□□ -0.39
LINC00544-201ENST00000400540 PARD3BQ8TEW8 1205 aa12.6□□□□□ -0.39
LINC00544-201ENST00000400540 FOXD4L4Q8WXT5 416 aaPredicted RBP12.6□□□□□ -0.39
LINC00544-201ENST00000400540 BHMTQ93088 406 aa12.6□□□□□ -0.39
LINC00544-201ENST00000400540 INTS4Q96HW7 963 aaKnown RBP12.6□□□□□ -0.39
LINC00544-201ENST00000400540 TNIP3Q96KP6 325 aa12.6□□□□□ -0.39
LINC00544-201ENST00000400540 HSPA12BQ96MM6 686 aa12.6□□□□□ -0.39
LINC00544-201ENST00000400540 CAMK1GQ96NX5 476 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms