RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 CCDC197Q8NCU1 140 aa16.38■□□□□ 0.21
CDC42-203ENST00000400259 TRPV1Q8NER1 839 aa16.38■□□□□ 0.21
CDC42-203ENST00000400259 DYDC1Q8WWB3 177 aa16.38■□□□□ 0.21
CDC42-203ENST00000400259 SGSM3Q96HU1 749 aa16.38■□□□□ 0.21
CDC42-203ENST00000400259 MTG1Q9BT17 334 aaPredicted RBP16.38■□□□□ 0.21
CDC42-203ENST00000400259 DHRS4Q9BTZ2 278 aa16.38■□□□□ 0.21
CDC42-203ENST00000400259 DUSP16Q9BY84 665 aa16.38■□□□□ 0.21
CDC42-203ENST00000400259 ADAM33Q9BZ11 813 aa16.38■□□□□ 0.21
CDC42-203ENST00000400259 TRPV2Q9Y5S1 764 aa16.38■□□□□ 0.21
CDC42-203ENST00000400259 ZNF638Q14966 1978 aaKnown RBP16.38■□□□□ 0.21
CDC42-203ENST00000400259 MYADML2A6NDP7 307 aa16.37■□□□□ 0.21
CDC42-203ENST00000400259 GABRDO14764 452 aa16.37■□□□□ 0.21
CDC42-203ENST00000400259 PRPF4O43172 522 aaKnown RBP eCLIP16.37■□□□□ 0.211e-7■■■■□ 24.7
CDC42-203ENST00000400259 BANF1O75531 89 aa16.37■□□□□ 0.21
CDC42-203ENST00000400259 FSBPO95073 299 aa16.37■□□□□ 0.21
CDC42-203ENST00000400259 SLC10A3P09131 477 aa16.37■□□□□ 0.21
CDC42-203ENST00000400259 MAGEA6P43360 314 aa16.37■□□□□ 0.21
CDC42-203ENST00000400259 GEMIN4P57678 1058 aaKnown RBP16.37■□□□□ 0.21
CDC42-203ENST00000400259 BASP1P80723 227 aaKnown RBP16.37■□□□□ 0.21
CDC42-203ENST00000400259 ANKMY2Q8IV38 441 aa16.37■□□□□ 0.21
CDC42-203ENST00000400259 FUKQ8N0W3 1084 aa16.37■□□□□ 0.21
CDC42-203ENST00000400259 FRMD8Q9BZ67 464 aaPredicted RBP16.37■□□□□ 0.21
CDC42-203ENST00000400259 UPF3AQ9H1J1 476 aaKnown RBP16.37■□□□□ 0.21
CDC42-203ENST00000400259 ACSS3Q9H6R3 686 aa16.37■□□□□ 0.21
CDC42-203ENST00000400259 NRDE2Q9H7Z3 1164 aa16.37■□□□□ 0.21
CDC42-203ENST00000400259 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.37■□□□□ 0.214e-9■■□□□ 13.2
CDC42-203ENST00000400259 PSMC3IPQ9P2W1 217 aaPredicted RBP16.37■□□□□ 0.21
CDC42-203ENST00000400259 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.37■□□□□ 0.21
CDC42-203ENST00000400259 POC1B-GALNT4F8VUJ3 575 aa16.36■□□□□ 0.21
CDC42-203ENST00000400259 M0QZ92 97 aa16.36■□□□□ 0.21
CDC42-203ENST00000400259 VIMP08670 466 aaKnown RBP16.36■□□□□ 0.21
CDC42-203ENST00000400259 LCP1P13796 627 aa16.36■□□□□ 0.21
CDC42-203ENST00000400259 ZFXP17010 805 aaPredicted RBP16.36■□□□□ 0.21
CDC42-203ENST00000400259 PSEN1P49768 467 aa16.36■□□□□ 0.21
CDC42-203ENST00000400259 NKX3-2P78367 333 aa16.36■□□□□ 0.21
CDC42-203ENST00000400259 XRCC4Q13426 336 aa16.36■□□□□ 0.21
CDC42-203ENST00000400259 LRRC14Q15048 493 aa16.36■□□□□ 0.21
CDC42-203ENST00000400259 C4orf22Q6V702 233 aa16.36■□□□□ 0.21
CDC42-203ENST00000400259 SAPCD2Q86UD0 394 aa16.36■□□□□ 0.21
CDC42-203ENST00000400259 KCTD13Q8WZ19 329 aa16.36■□□□□ 0.21
CDC42-203ENST00000400259 SLC38A7Q9NVC3 462 aa16.36■□□□□ 0.21
CDC42-203ENST00000400259 MTMR10Q9NXD2 777 aa16.36■□□□□ 0.21
CDC42-203ENST00000400259 NKIRAS1Q9NYS0 192 aa16.36■□□□□ 0.21
CDC42-203ENST00000400259 CDY2AQ9Y6F7 541 aa16.36■□□□□ 0.21
CDC42-203ENST00000400259 FAM47DPA6NHR8 397 aa16.36■□□□□ 0.21
CDC42-203ENST00000400259 C6orf222P0C671 652 aaPredicted RBP16.36■□□□□ 0.21
CDC42-203ENST00000400259 CYBAP13498 195 aa16.36■□□□□ 0.21
CDC42-203ENST00000400259 CYP2F1P24903 491 aa16.36■□□□□ 0.21
CDC42-203ENST00000400259 MATKP42679 507 aa16.36■□□□□ 0.21
CDC42-203ENST00000400259 KLHL38Q2WGJ6 581 aa16.36■□□□□ 0.21
CDC42-203ENST00000400259 PIGZQ86VD9 579 aa16.36■□□□□ 0.21
CDC42-203ENST00000400259 PSTKQ8IV42 348 aaKnown RBP16.36■□□□□ 0.21
CDC42-203ENST00000400259 ANKS4BQ8N8V4 417 aa16.36■□□□□ 0.21
CDC42-203ENST00000400259 ANKRD42Q8N9B4 389 aa16.36■□□□□ 0.21
CDC42-203ENST00000400259 FBXO36Q8NEA4 188 aa16.36■□□□□ 0.21
CDC42-203ENST00000400259 MGARPQ8TDB4 240 aa16.36■□□□□ 0.21
CDC42-203ENST00000400259 MAGEB18Q96M61 343 aa16.36■□□□□ 0.21
CDC42-203ENST00000400259 PRDM16Q9HAZ2 1276 aa16.36■□□□□ 0.21
CDC42-203ENST00000400259 SSU72Q9NP77 194 aaKnown RBP16.36■□□□□ 0.21
CDC42-203ENST00000400259 CHST12Q9NRB3 414 aa16.36■□□□□ 0.21
CDC42-203ENST00000400259 SAMD15Q9P1V8 674 aa16.36■□□□□ 0.21
CDC42-203ENST00000400259 AP4E1Q9UPM8 1137 aa16.36■□□□□ 0.21
CDC42-203ENST00000400259 CASP8AP2Q9UKL3 1982 aa16.36■□□□□ 0.21
CDC42-203ENST00000400259 CYB561D2O14569 222 aa16.35■□□□□ 0.21
CDC42-203ENST00000400259 KCNN4O15554 427 aa16.35■□□□□ 0.21
CDC42-203ENST00000400259 DAB1O75553 588 aa16.35■□□□□ 0.21
CDC42-203ENST00000400259 OAS1P00973 400 aaKnown RBP16.35■□□□□ 0.21
CDC42-203ENST00000400259 CTGFP29279 349 aa16.35■□□□□ 0.21
CDC42-203ENST00000400259 NR2C2P49116 596 aa16.35■□□□□ 0.21
CDC42-203ENST00000400259 NRLP54845 237 aa16.35■□□□□ 0.21
CDC42-203ENST00000400259 ADCY1Q08828 1119 aa16.35■□□□□ 0.21
CDC42-203ENST00000400259 FBXW10Q5XX13 1052 aa16.35■□□□□ 0.21
CDC42-203ENST00000400259 CCDC121Q6ZUS5 278 aa16.35■□□□□ 0.21
CDC42-203ENST00000400259 BNIPLQ7Z465 357 aa16.35■□□□□ 0.21
CDC42-203ENST00000400259 RPAINQ86UA6 219 aa16.35■□□□□ 0.21
CDC42-203ENST00000400259 CDKL3Q8IVW4 592 aaPredicted RBP16.35■□□□□ 0.21
CDC42-203ENST00000400259 GSTCDQ8NEC7 633 aa16.35■□□□□ 0.21
CDC42-203ENST00000400259 ZFP42Q96MM3 310 aa16.35■□□□□ 0.21
CDC42-203ENST00000400259 RCOR3Q9P2K3 495 aaPredicted RBP16.35■□□□□ 0.21
CDC42-203ENST00000400259 SMG5Q9UPR3 1016 aaKnown RBP16.35■□□□□ 0.21
CDC42-203ENST00000400259 TDRD15B5MCY1 1934 aaKnown RBP16.35■□□□□ 0.21
CDC42-203ENST00000400259 GOLGA6L7A0A1B0GV03 622 aa16.35■□□□□ 0.21
CDC42-203ENST00000400259 ZBED1O96006 694 aa16.35■□□□□ 0.21
CDC42-203ENST00000400259 RPLP2P05387 115 aaKnown RBP16.35■□□□□ 0.21
CDC42-203ENST00000400259 NPR3P17342 541 aa16.35■□□□□ 0.21
CDC42-203ENST00000400259 PTPN1P18031 435 aaKnown RBP16.35■□□□□ 0.21
CDC42-203ENST00000400259 SSTR1P30872 391 aa16.35■□□□□ 0.21
CDC42-203ENST00000400259 SLC8A3P57103 927 aa16.35■□□□□ 0.21
CDC42-203ENST00000400259 CRHR2Q13324 411 aa16.35■□□□□ 0.21
CDC42-203ENST00000400259 PKN2Q16513 984 aaKnown RBP16.35■□□□□ 0.21
CDC42-203ENST00000400259 SLC25A52Q3SY17 297 aa16.35■□□□□ 0.21
CDC42-203ENST00000400259 BBS9Q3SYG4 887 aa16.35■□□□□ 0.21
CDC42-203ENST00000400259 TTC31Q49AM3 519 aaPredicted RBP16.35■□□□□ 0.21
CDC42-203ENST00000400259 LACTB2Q53H82 288 aaPredicted RBP16.35■□□□□ 0.21
CDC42-203ENST00000400259 PPP6R3Q5H9R7 873 aaPredicted RBP16.35■□□□□ 0.21
CDC42-203ENST00000400259 RNF187Q5TA31 235 aaPredicted RBP16.35■□□□□ 0.21
CDC42-203ENST00000400259 ADGRD1Q6QNK2 874 aa16.35■□□□□ 0.21
CDC42-203ENST00000400259 C3orf62Q6ZUJ4 267 aa16.35■□□□□ 0.21
CDC42-203ENST00000400259 PAQR9Q6ZVX9 377 aa16.35■□□□□ 0.21
CDC42-203ENST00000400259 RSPH3Q86UC2 560 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms