RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 ITPAQ9BY32 194 aa5.75□□□□□ -1.49
HMGB3P7-201ENST00000400214 RNF208Q9H0X6 261 aa5.75□□□□□ -1.49
HMGB3P7-201ENST00000400214 SOX17Q9H6I2 414 aaPredicted RBP5.75□□□□□ -1.49
HMGB3P7-201ENST00000400214 RIOX1Q9H6W3 641 aa5.75□□□□□ -1.49
HMGB3P7-201ENST00000400214 LY9Q9HBG7 655 aa5.75□□□□□ -1.49
HMGB3P7-201ENST00000400214 RAVER2Q9HCJ3 691 aaKnown RBP5.75□□□□□ -1.49
HMGB3P7-201ENST00000400214 SAYSD1Q9NPB0 183 aa5.75□□□□□ -1.49
HMGB3P7-201ENST00000400214 EIF2B3Q9NR50 452 aaKnown RBP5.75□□□□□ -1.49
HMGB3P7-201ENST00000400214 GFOD1Q9NXC2 390 aa5.75□□□□□ -1.49
HMGB3P7-201ENST00000400214 MAD2L2Q9UI95 211 aa5.75□□□□□ -1.49
HMGB3P7-201ENST00000400214 SH3BGRL2Q9UJC5 107 aa5.75□□□□□ -1.49
HMGB3P7-201ENST00000400214 FBXL5Q9UKA1 691 aa5.75□□□□□ -1.49
HMGB3P7-201ENST00000400214 COG5Q9UP83 839 aa5.75□□□□□ -1.49
HMGB3P7-201ENST00000400214 PFASO15067 1338 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 SYNGAP1Q96PV0 1343 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 WDR81Q562E7 1941 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 HMX3A6NHT5 357 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 LRRC14BA6NHZ5 514 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 KLRF2D3W0D1 207 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 FAM47E-STBD1D6RA91 191 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 H0Y8X5 98 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 SH2B2O14492 632 aaPredicted RBP5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 PIP5K1BO14986 540 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 ENDOD1O94919 500 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 AMY2AP04746 511 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 ITGA5P08648 1049 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 CSF1P09603 554 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 GOLGA8HP0CJ92 632 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 NR2F1P10589 423 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 MAPTP10636 758 aaKnown RBP5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 ACADMP11310 421 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 MYL4P12829 197 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 CYBAP13498 195 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 MTHFD2P13995 350 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 AMY2BP19961 511 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 GRK3P35626 688 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 SLC16A2P36021 539 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 ADH7P40394 386 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 STAT5AP42229 794 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 MSH2P43246 934 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 PPP5CP53041 499 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 SOX10P56693 466 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 RAC1P63000 192 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 NKX6-1P78426 367 aaPredicted RBP5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 MC1RQ01726 317 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 GHRHRQ02643 423 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 GRM4Q14833 912 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 RAB30Q15771 203 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 INF2Q27J81 1249 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 ZNF674Q2M3X9 581 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 WSCD2Q2TBF2 565 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 ODF2Q5BJF6 829 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 C3orf38Q5JPI3 329 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 MFSD14CQ5VZR4 134 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 IRGCQ6NXR0 463 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 BORAQ6PGQ7 559 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 FBXO38Q6PIJ6 1188 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 CRTC1Q6UUV9 634 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 LYPD4Q6UWN0 246 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 NFXL1Q6ZNB6 911 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 USP51Q70EK9 711 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 CHST3Q7LGC8 479 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 UBE3DQ7Z6J8 389 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 THAP5Q7Z6K1 395 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 PRPF39Q86UA1 669 aaKnown RBP5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 FAM133AQ8N9E0 248 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 KLHL23Q8NBE8 558 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 SPC24Q8NBT2 197 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 ZNF540Q8NDQ6 660 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 U2AF1L4Q8WU68 220 aaKnown RBP5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 CLEC4DQ8WXI8 215 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 SHISA4Q96DD7 197 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 ASIC4Q96FT7 647 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 UROC1Q96N76 676 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 NEK1Q96PY6 1258 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 PPP1R9BQ96SB3 815 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 KCNJ15Q99712 375 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 GDF15Q99988 308 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 TSEN34Q9BSV6 310 aaKnown RBP5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 PRDM14Q9GZV8 571 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 EPS8L2Q9H6S3 715 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 A1CFQ9NQ94 594 aaKnown RBP5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 TM7SF3Q9NS93 570 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 RNF146Q9NTX7 359 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 KCTD5Q9NXV2 234 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 DNAJB12Q9NXW2 375 aaKnown RBP5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 CYP39A1Q9NYL5 469 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 COL20A1Q9P218 1284 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 DPP7Q9UHL4 492 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 CCPG1Q9ULG6 757 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 RNF112Q9ULX5 631 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 SNX14Q9Y5W7 946 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 EPN1Q9Y6I3 576 aaPredicted RBP5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 KAT6AQ92794 2004 aa5.74□□□□□ -1.49
HMGB3P7-201ENST00000400214 NID2Q14112 1375 aa5.73□□□□□ -1.49
HMGB3P7-201ENST00000400214 SLC35F4A4IF30 521 aa5.73□□□□□ -1.49
HMGB3P7-201ENST00000400214 AGAP14A8MT82 685 aa5.73□□□□□ -1.49
HMGB3P7-201ENST00000400214 BOLA2-SMG1P6H3BVE0 249 aa5.73□□□□□ -1.49
HMGB3P7-201ENST00000400214 GTPBP1O00178 669 aaKnown RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms