RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 ZSWIM7Q19AV6 140 aa11.32□□□□□ -0.6
CACNA1C-210ENST00000399606 GPC2Q8N158 579 aa11.32□□□□□ -0.6
CACNA1C-210ENST00000399606 ZNF655Q8N720 491 aaPredicted RBP11.32□□□□□ -0.6
CACNA1C-210ENST00000399606 C19orf60Q96EN9 201 aa11.32□□□□□ -0.6
CACNA1C-210ENST00000399606 MCEEQ96PE7 176 aa11.32□□□□□ -0.6
CACNA1C-210ENST00000399606 ARMC7Q9H6L4 198 aa11.32□□□□□ -0.6
CACNA1C-210ENST00000399606 IL1RAPL1Q9NZN1 696 aa11.32□□□□□ -0.6
CACNA1C-210ENST00000399606 GMNCA6NCL1 334 aa11.32□□□□□ -0.6
CACNA1C-210ENST00000399606 KRT16P08779 473 aa11.32□□□□□ -0.6
CACNA1C-210ENST00000399606 ITGB6P18564 788 aa11.32□□□□□ -0.6
CACNA1C-210ENST00000399606 CYP20A1Q6UW02 462 aa11.32□□□□□ -0.6
CACNA1C-210ENST00000399606 CD99L2Q8TCZ2 262 aa11.32□□□□□ -0.6
CACNA1C-210ENST00000399606 CAAP1Q9H8G2 361 aa11.32□□□□□ -0.6
CACNA1C-210ENST00000399606 NSMCE4AQ9NXX6 385 aa11.32□□□□□ -0.6
CACNA1C-210ENST00000399606 DLC1Q96QB1 1528 aa11.32□□□□□ -0.6
CACNA1C-210ENST00000399606 CYP26A1O43174 497 aa11.32□□□□□ -0.6
CACNA1C-210ENST00000399606 TRIM13O60858 407 aa11.32□□□□□ -0.6
CACNA1C-210ENST00000399606 VPS26AO75436 327 aa11.32□□□□□ -0.6
CACNA1C-210ENST00000399606 UMPSP11172 480 aa11.32□□□□□ -0.6
CACNA1C-210ENST00000399606 CYP2A6P11509 494 aaPredicted RBP11.32□□□□□ -0.6
CACNA1C-210ENST00000399606 PTPN1P18031 435 aaKnown RBP11.32□□□□□ -0.6
CACNA1C-210ENST00000399606 TMED10P49755 219 aaKnown RBP11.32□□□□□ -0.6
CACNA1C-210ENST00000399606 ALG11Q2TAA5 492 aa11.32□□□□□ -0.6
CACNA1C-210ENST00000399606 PGS1Q32NB8 556 aa11.32□□□□□ -0.6
CACNA1C-210ENST00000399606 SERPINA13PQ6UXR4 307 aa11.32□□□□□ -0.6
CACNA1C-210ENST00000399606 SPEF1Q9Y4P9 236 aa11.32□□□□□ -0.6
CACNA1C-210ENST00000399606 SLC9A3R1O14745 358 aaPredicted RBP11.32□□□□□ -0.6
CACNA1C-210ENST00000399606 AKAP10O43572 662 aa11.32□□□□□ -0.6
CACNA1C-210ENST00000399606 SERPINB1P30740 379 aa11.32□□□□□ -0.6
CACNA1C-210ENST00000399606 CCINQ13939 588 aa11.32□□□□□ -0.6
CACNA1C-210ENST00000399606 TRADDQ15628 312 aa11.32□□□□□ -0.6
CACNA1C-210ENST00000399606 STRBPQ96SI9 672 aaKnown RBP11.32□□□□□ -0.6
CACNA1C-210ENST00000399606 SIKE1Q9BRV8 207 aa11.32□□□□□ -0.6
CACNA1C-210ENST00000399606 TIPINQ9BVW5 301 aa11.32□□□□□ -0.6
CACNA1C-210ENST00000399606 GNG14A0A1W2PPG7 69 aa11.32□□□□□ -0.6
CACNA1C-210ENST00000399606 DNTTP04053 509 aa11.32□□□□□ -0.6
CACNA1C-210ENST00000399606 CTCFP49711 727 aaPredicted RBP11.32□□□□□ -0.6
CACNA1C-210ENST00000399606 RAB27AP51159 221 aa11.32□□□□□ -0.6
CACNA1C-210ENST00000399606 PTPN12Q05209 780 aaKnown RBP11.32□□□□□ -0.6
CACNA1C-210ENST00000399606 LRRC74BQ6ZQY2 392 aa11.32□□□□□ -0.6
CACNA1C-210ENST00000399606 UBASH3BQ8TF42 649 aa11.32□□□□□ -0.6
CACNA1C-210ENST00000399606 GID8Q9NWU2 228 aa11.32□□□□□ -0.6
CACNA1C-210ENST00000399606 SCN3BQ9NY72 215 aa11.32□□□□□ -0.6
CACNA1C-210ENST00000399606 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.32□□□□□ -0.6
CACNA1C-210ENST00000399606 SALL3Q9BXA9 1300 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 PCP4L1A6NKN8 68 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 TK2O00142 265 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 TULP2O00295 520 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 BIRC5O15392 142 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 ITGALP20701 1170 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 PTPN7P35236 360 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 USP11P51784 963 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 ORC1Q13415 861 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 PARGQ86W56 976 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 RHOT1Q8IXI2 618 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 SUN3Q8TAQ9 357 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 METTL5Q9NRN9 209 aaKnown RBP11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 ANKRD65E5RJM6 399 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 KIAA0391O15091 583 aaKnown RBP11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 RHOBTB3O94955 611 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 PEX5P50542 639 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 FAXCQ5TGI0 409 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 HHIPL2Q6UWX4 724 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 OR10G6Q8NH81 332 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 AIFM3Q96NN9 605 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 PI4K2AQ9BTU6 479 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 FUT8Q9BYC5 575 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 CXorf56Q9H5V9 222 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 ZNF536O15090 1300 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 ENO1P06733 434 aaKnown RBP11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 GSTM1P09488 218 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 KLRC1P26715 233 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 PGM1P36871 562 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 BACE1P56817 501 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 CHPFQ8IZ52 775 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 FAM136AQ96C01 138 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 SNF8Q96H20 258 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 SLC4A9Q96Q91 983 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 CLPBQ9H078 707 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 MYLK2Q9H1R3 596 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 IL1RL2Q9HB29 575 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 KRT84Q9NSB2 600 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 ADAMTS1Q9UHI8 967 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 BLOC1S6Q9UL45 172 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 GOLGA8TH3BQL2 631 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 SERPINB3P29508 390 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 SEC13P55735 322 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 GRIK4Q16099 956 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 CLEC16AQ2KHT3 1053 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 SEZ6Q53EL9 994 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 ZNF544Q6NX49 715 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 ANKMY2Q8IV38 441 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 MYO1HQ8N1T3 1032 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 GRIN3AQ8TCU5 1115 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 CALML6Q8TD86 181 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 RNF112Q9ULX5 631 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 RNF103O00237 685 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 GNSP15586 552 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 DHPSP49366 369 aaPredicted RBP11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 SOX10P56693 466 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms