RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 FETUBQ9UGM5 382 aa16.6■□□□□ 0.25
CHMP1A-201ENST00000397901 PCSK1NQ9UHG2 260 aa16.6■□□□□ 0.25
CHMP1A-201ENST00000397901 RLFQ13129 1914 aa16.6■□□□□ 0.25
CHMP1A-201ENST00000397901 VWA5AO00534 786 aa16.59■□□□□ 0.25
CHMP1A-201ENST00000397901 LRCH4O75427 683 aa16.59■□□□□ 0.25
CHMP1A-201ENST00000397901 LDHAP00338 332 aaKnown RBP16.59■□□□□ 0.25
CHMP1A-201ENST00000397901 ASS1P00966 412 aaKnown RBP16.59■□□□□ 0.25
CHMP1A-201ENST00000397901 IDO1P14902 403 aa16.59■□□□□ 0.25
CHMP1A-201ENST00000397901 ELK3P41970 407 aa16.59■□□□□ 0.25
CHMP1A-201ENST00000397901 CDK16Q00536 496 aa16.59■□□□□ 0.25
CHMP1A-201ENST00000397901 FAAP100Q0VG06 881 aa16.59■□□□□ 0.25
CHMP1A-201ENST00000397901 KIAA0319LQ8IZA0 1049 aa16.59■□□□□ 0.25
CHMP1A-201ENST00000397901 OR6Y1Q8NGX8 325 aa16.59■□□□□ 0.25
CHMP1A-201ENST00000397901 GPAMQ9HCL2 828 aa16.59■□□□□ 0.25
CHMP1A-201ENST00000397901 ARMCX1Q9P291 453 aa16.59■□□□□ 0.25
CHMP1A-201ENST00000397901 ZNF112Q9UJU3 913 aa16.59■□□□□ 0.25
CHMP1A-201ENST00000397901 BARX2Q9UMQ3 279 aaPredicted RBP16.59■□□□□ 0.25
CHMP1A-201ENST00000397901 UTRNP46939 3433 aa16.59■□□□□ 0.25
CHMP1A-201ENST00000397901 E2F6O75461 281 aa16.59■□□□□ 0.25
CHMP1A-201ENST00000397901 SUPT3HO75486 399 aa16.59■□□□□ 0.25
CHMP1A-201ENST00000397901 OR6B1O95007 311 aa16.59■□□□□ 0.25
CHMP1A-201ENST00000397901 BAG2O95816 211 aa16.59■□□□□ 0.25
CHMP1A-201ENST00000397901 CD97P48960 835 aa16.59■□□□□ 0.25
CHMP1A-201ENST00000397901 TAF5Q15542 800 aa16.59■□□□□ 0.25
CHMP1A-201ENST00000397901 DENND1BQ6P3S1 775 aa16.59■□□□□ 0.25
CHMP1A-201ENST00000397901 RFX8Q6ZV50 586 aa16.59■□□□□ 0.25
CHMP1A-201ENST00000397901 RASSF3Q86WH2 238 aa16.59■□□□□ 0.25
CHMP1A-201ENST00000397901 PDSS2Q86YH6 399 aa16.59■□□□□ 0.25
CHMP1A-201ENST00000397901 RFX6Q8HWS3 928 aa16.59■□□□□ 0.25
CHMP1A-201ENST00000397901 SCUBE1Q8IWY4 988 aa16.59■□□□□ 0.25
CHMP1A-201ENST00000397901 RSPH1Q8WYR4 309 aa16.59■□□□□ 0.25
CHMP1A-201ENST00000397901 GFM2Q969S9 779 aaKnown RBP16.59■□□□□ 0.25
CHMP1A-201ENST00000397901 SKA1Q96BD8 255 aa16.59■□□□□ 0.25
CHMP1A-201ENST00000397901 ALKBH8Q96BT7 664 aaKnown RBP16.59■□□□□ 0.25
CHMP1A-201ENST00000397901 PORCNQ9H237 461 aa16.59■□□□□ 0.25
CHMP1A-201ENST00000397901 MTO1Q9Y2Z2 717 aaKnown RBP16.59■□□□□ 0.25
CHMP1A-201ENST00000397901 GJA3Q9Y6H8 435 aa16.59■□□□□ 0.25
CHMP1A-201ENST00000397901 IKBKGQ9Y6K9 419 aa16.59■□□□□ 0.25
CHMP1A-201ENST00000397901 E7ESA3 106 aa16.58■□□□□ 0.25
CHMP1A-201ENST00000397901 ITGBL1O95965 494 aaPredicted RBP16.58■□□□□ 0.25
CHMP1A-201ENST00000397901 KDELR1P24390 212 aa16.58■□□□□ 0.25
CHMP1A-201ENST00000397901 CPA2P48052 419 aa16.58■□□□□ 0.25
CHMP1A-201ENST00000397901 BACE1P56817 501 aa16.58■□□□□ 0.25
CHMP1A-201ENST00000397901 YWHAGP61981 247 aaKnown RBP eCLIP16.58■□□□□ 0.25
CHMP1A-201ENST00000397901 KBTBD12Q3ZCT8 623 aa16.58■□□□□ 0.25
CHMP1A-201ENST00000397901 PTPN20Q4JDL3 420 aa16.58■□□□□ 0.25
CHMP1A-201ENST00000397901 SLC44A4Q53GD3 710 aa16.58■□□□□ 0.25
CHMP1A-201ENST00000397901 SNRNP48Q6IEG0 339 aaKnown RBP16.58■□□□□ 0.25
CHMP1A-201ENST00000397901 NCCRP1Q6ZVX7 275 aaPredicted RBP16.58■□□□□ 0.25
CHMP1A-201ENST00000397901 BBS12Q6ZW61 710 aa16.58■□□□□ 0.25
CHMP1A-201ENST00000397901 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.58■□□□□ 0.255e-6■■□□□ 13.3
CHMP1A-201ENST00000397901 NIPA2Q8N8Q9 360 aa16.58■□□□□ 0.25
CHMP1A-201ENST00000397901 CYTH2Q99418 400 aa16.58■□□□□ 0.25
CHMP1A-201ENST00000397901 TTC1Q99614 292 aa16.58■□□□□ 0.25
CHMP1A-201ENST00000397901 BTBD7Q9P203 1132 aa16.58■□□□□ 0.25
CHMP1A-201ENST00000397901 PPP1R1BQ9UD71 204 aaPredicted RBP16.58■□□□□ 0.25
CHMP1A-201ENST00000397901 COL11A1P12107 1806 aaPredicted RBP16.58■□□□□ 0.24
CHMP1A-201ENST00000397901 KBTBD13C9JR72 458 aa16.58■□□□□ 0.24
CHMP1A-201ENST00000397901 VILLO15195 856 aa16.58■□□□□ 0.24
CHMP1A-201ENST00000397901 BUD23O43709 281 aaKnown RBP16.58■□□□□ 0.24
CHMP1A-201ENST00000397901 INHBAP08476 426 aa16.58■□□□□ 0.24
CHMP1A-201ENST00000397901 SUPT20HL2P0C7V6 817 aa16.58■□□□□ 0.24
CHMP1A-201ENST00000397901 MYL2P10916 166 aa16.58■□□□□ 0.24
CHMP1A-201ENST00000397901 KRT3P12035 628 aa16.58■□□□□ 0.24
CHMP1A-201ENST00000397901 UQCRBP14927 111 aa16.58■□□□□ 0.24
CHMP1A-201ENST00000397901 CD19P15391 556 aa16.58■□□□□ 0.24
CHMP1A-201ENST00000397901 NAMPTP43490 491 aa16.58■□□□□ 0.24
CHMP1A-201ENST00000397901 EIF3EP60228 445 aaKnown RBP16.58■□□□□ 0.24
CHMP1A-201ENST00000397901 TAP1Q03518 808 aa16.58■□□□□ 0.24
CHMP1A-201ENST00000397901 DCTN2Q13561 401 aaKnown RBP16.58■□□□□ 0.24
CHMP1A-201ENST00000397901 SUPT20HL1Q3ZLR7 823 aa16.58■□□□□ 0.24
CHMP1A-201ENST00000397901 TMCO4Q5TGY1 634 aa16.58■□□□□ 0.24
CHMP1A-201ENST00000397901 RIPOR1Q6ZS17 1223 aa16.58■□□□□ 0.24
CHMP1A-201ENST00000397901 ADGRG6Q86SQ4 1221 aa16.58■□□□□ 0.24
CHMP1A-201ENST00000397901 HSPH1Q92598 858 aa16.58■□□□□ 0.24
CHMP1A-201ENST00000397901 CCDC97Q96F63 343 aaPredicted RBP16.58■□□□□ 0.24
CHMP1A-201ENST00000397901 TCHPQ9BT92 498 aa16.58■□□□□ 0.24
CHMP1A-201ENST00000397901 TBCCD1Q9NVR7 557 aa16.58■□□□□ 0.24
CHMP1A-201ENST00000397901 ADGRA2Q96PE1 1338 aa16.58■□□□□ 0.24
CHMP1A-201ENST00000397901 IQANK1A0A1B0GTG1 560 aa16.57■□□□□ 0.24
CHMP1A-201ENST00000397901 FAM237BA0A1B0GVD1 139 aa16.57■□□□□ 0.24
CHMP1A-201ENST00000397901 TCRBV9S1A1TA0A576 114 aa16.57■□□□□ 0.24
CHMP1A-201ENST00000397901 MAFGO15525 162 aa16.57■□□□□ 0.24
CHMP1A-201ENST00000397901 PIGRP01833 764 aa16.57■□□□□ 0.24
CHMP1A-201ENST00000397901 DLDP09622 509 aaKnown RBP16.57■□□□□ 0.24
CHMP1A-201ENST00000397901 CDK4P11802 303 aa16.57■□□□□ 0.24
CHMP1A-201ENST00000397901 ZNF24P17028 368 aa16.57■□□□□ 0.24
CHMP1A-201ENST00000397901 HIRAP54198 1017 aaPredicted RBP16.57■□□□□ 0.24
CHMP1A-201ENST00000397901 ACTR3P61158 418 aa16.57■□□□□ 0.24
CHMP1A-201ENST00000397901 SP2Q02086 613 aa16.57■□□□□ 0.24
CHMP1A-201ENST00000397901 PRKD1Q15139 912 aaPredicted RBP16.57■□□□□ 0.24
CHMP1A-201ENST00000397901 DCAF15Q66K64 600 aa16.57■□□□□ 0.24
CHMP1A-201ENST00000397901 XRRA1Q6P2D8 792 aa16.57■□□□□ 0.24
CHMP1A-201ENST00000397901 POLNQ7Z5Q5 900 aa16.57■□□□□ 0.24
CHMP1A-201ENST00000397901 ALYREFQ86V81 257 aaKnown RBP16.57■□□□□ 0.24
CHMP1A-201ENST00000397901 TMPRSS6Q8IU80 811 aa16.57■□□□□ 0.24
CHMP1A-201ENST00000397901 ALDH16A1Q8IZ83 802 aa16.57■□□□□ 0.24
CHMP1A-201ENST00000397901 REPS2Q8NFH8 660 aa16.57■□□□□ 0.24
CHMP1A-201ENST00000397901 NSUN6Q8TEA1 469 aaKnown RBP16.57■□□□□ 0.24
CHMP1A-201ENST00000397901 SNRNP27Q8WVK2 155 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms