RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 ENTPD7Q9NQZ7 604 aa28.74■■■□□ 2.19
CPNE1-203ENST00000397442 USP18Q9UMW8 372 aa28.74■■■□□ 2.19
CPNE1-203ENST00000397442 C2orf71A6NGG8 1288 aa28.73■■■□□ 2.19
CPNE1-203ENST00000397442 HIDE1A8MVS5 230 aa28.73■■■□□ 2.19
CPNE1-203ENST00000397442 RTN3O95197 1032 aaPredicted RBP28.73■■■□□ 2.19
CPNE1-203ENST00000397442 CA8P35219 290 aa28.73■■■□□ 2.19
CPNE1-203ENST00000397442 YWHAGP61981 247 aaKnown RBP eCLIP28.73■■■□□ 2.19
CPNE1-203ENST00000397442 EDEM1Q92611 657 aa28.73■■■□□ 2.19
CPNE1-203ENST00000397442 SAMD11Q96NU1 681 aa28.73■■■□□ 2.19
CPNE1-203ENST00000397442 NMUR1Q9HB89 426 aa28.73■■■□□ 2.19
CPNE1-203ENST00000397442 COMMD8Q9NX08 183 aa28.73■■■□□ 2.19
CPNE1-203ENST00000397442 PCSK1NQ9UHG2 260 aa28.73■■■□□ 2.19
CPNE1-203ENST00000397442 MAFFQ9ULX9 164 aa28.73■■■□□ 2.19
CPNE1-203ENST00000397442 YIPF1Q9Y548 306 aa28.73■■■□□ 2.19
CPNE1-203ENST00000397442 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.72■■■□□ 2.19
CPNE1-203ENST00000397442 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.72■■■□□ 2.19
CPNE1-203ENST00000397442 SLC38A8A6NNN8 435 aa28.72■■■□□ 2.19
CPNE1-203ENST00000397442 FSCN2O14926 492 aa28.72■■■□□ 2.19
CPNE1-203ENST00000397442 ENDOD1O94919 500 aa28.72■■■□□ 2.19
CPNE1-203ENST00000397442 TRUB2O95900 331 aaKnown RBP28.72■■■□□ 2.19
CPNE1-203ENST00000397442 NCAM1P13591 858 aa28.72■■■□□ 2.19
CPNE1-203ENST00000397442 YWHAQP27348 245 aa28.72■■■□□ 2.19
CPNE1-203ENST00000397442 GJC1P36383 396 aa28.72■■■□□ 2.19
CPNE1-203ENST00000397442 PLPP4Q5VZY2 271 aa28.72■■■□□ 2.19
CPNE1-203ENST00000397442 LILRA6Q6PI73 481 aa28.72■■■□□ 2.19
CPNE1-203ENST00000397442 STRADAQ7RTN6 431 aa28.72■■■□□ 2.19
CPNE1-203ENST00000397442 ACTRT1Q8TDG2 376 aa28.72■■■□□ 2.19
CPNE1-203ENST00000397442 TTLL2Q9BWV7 592 aa28.72■■■□□ 2.19
CPNE1-203ENST00000397442 RNF14Q9UBS8 474 aa28.72■■■□□ 2.19
CPNE1-203ENST00000397442 CAPN9O14815 690 aa28.71■■■□□ 2.19
CPNE1-203ENST00000397442 TGM5O43548 720 aa28.71■■■□□ 2.19
CPNE1-203ENST00000397442 SULT1E1P49888 294 aa28.71■■■□□ 2.19
CPNE1-203ENST00000397442 ATXN1P54253 815 aaKnown RBP28.71■■■□□ 2.19
CPNE1-203ENST00000397442 SMC1AQ14683 1233 aaKnown RBP28.71■■■□□ 2.19
CPNE1-203ENST00000397442 HADHQ16836 314 aaKnown RBP28.71■■■□□ 2.19
CPNE1-203ENST00000397442 MON1AQ86VX9 555 aa28.71■■■□□ 2.19
CPNE1-203ENST00000397442 GOLGA1Q92805 767 aa28.71■■■□□ 2.19
CPNE1-203ENST00000397442 OSER1Q9NX31 292 aa28.71■■■□□ 2.19
CPNE1-203ENST00000397442 TTC7AQ9ULT0 858 aaPredicted RBP28.71■■■□□ 2.19
CPNE1-203ENST00000397442 STAP1Q9ULZ2 295 aa28.71■■■□□ 2.19
CPNE1-203ENST00000397442 A0A1W2PQH9 124 aa28.7■■■□□ 2.19
CPNE1-203ENST00000397442 TNRC18O15417 2968 aaPredicted RBP28.7■■■□□ 2.19
CPNE1-203ENST00000397442 CSPG5O95196 566 aa28.7■■■□□ 2.19
CPNE1-203ENST00000397442 SLU7O95391 586 aaKnown RBP28.7■■■□□ 2.19
CPNE1-203ENST00000397442 ZNF572Q7Z3I7 529 aaPredicted RBP28.7■■■□□ 2.19
CPNE1-203ENST00000397442 ZWILCHQ9H900 591 aa28.7■■■□□ 2.19
CPNE1-203ENST00000397442 KLHL11Q9NVR0 708 aa28.7■■■□□ 2.19
CPNE1-203ENST00000397442 GMIPQ9P107 970 aa28.7■■■□□ 2.19
CPNE1-203ENST00000397442 ADH1AP07327 375 aa28.7■■■□□ 2.18
CPNE1-203ENST00000397442 IRS1P35568 1242 aa28.7■■■□□ 2.18
CPNE1-203ENST00000397442 CEP112Q8N8E3 955 aa28.7■■■□□ 2.18
CPNE1-203ENST00000397442 EXD1Q8NHP7 514 aa28.7■■■□□ 2.18
CPNE1-203ENST00000397442 ACSF2Q96CM8 615 aaPredicted RBP28.7■■■□□ 2.18
CPNE1-203ENST00000397442 NCAPGQ9BPX3 1015 aa28.7■■■□□ 2.18
CPNE1-203ENST00000397442 TRIM62Q9BVG3 475 aa28.7■■■□□ 2.18
CPNE1-203ENST00000397442 ABCC13Q9NSE7 274 aa28.7■■■□□ 2.18
CPNE1-203ENST00000397442 LAMA3Q16787 3333 aa28.69■■■□□ 2.18
CPNE1-203ENST00000397442 H3BNC9 293 aa28.69■■■□□ 2.18
CPNE1-203ENST00000397442 M0QYT0 321 aa28.69■■■□□ 2.18
CPNE1-203ENST00000397442 PRRG1O14668 218 aa28.69■■■□□ 2.18
CPNE1-203ENST00000397442 KRT7P08729 469 aa28.69■■■□□ 2.18
CPNE1-203ENST00000397442 SPATA31D3P0C874 917 aa28.69■■■□□ 2.18
CPNE1-203ENST00000397442 DESP17661 470 aa28.69■■■□□ 2.18
CPNE1-203ENST00000397442 CKAP4Q07065 602 aaKnown RBP28.69■■■□□ 2.18
CPNE1-203ENST00000397442 TAF10Q12962 218 aa28.69■■■□□ 2.18
CPNE1-203ENST00000397442 SMTNL2Q2TAL5 461 aa28.69■■■□□ 2.18
CPNE1-203ENST00000397442 KCNT1Q5JUK3 1230 aa28.69■■■□□ 2.18
CPNE1-203ENST00000397442 SPATA31D4Q6ZUB0 917 aa28.69■■■□□ 2.18
CPNE1-203ENST00000397442 FBXO32Q969P5 355 aa28.69■■■□□ 2.18
CPNE1-203ENST00000397442 EMILIN2Q9BXX0 1053 aa28.69■■■□□ 2.18
CPNE1-203ENST00000397442 RRN3Q9NYV6 651 aa28.69■■■□□ 2.18
CPNE1-203ENST00000397442 INSL5Q9Y5Q6 135 aa28.69■■■□□ 2.18
CPNE1-203ENST00000397442 RARAP10276 462 aa28.68■■■□□ 2.18
CPNE1-203ENST00000397442 HMGA1P17096 107 aaKnown RBP28.68■■■□□ 2.18
CPNE1-203ENST00000397442 ELF1P32519 619 aa28.68■■■□□ 2.18
CPNE1-203ENST00000397442 BMP8BP34820 402 aa28.68■■■□□ 2.18
CPNE1-203ENST00000397442 CCDC181Q5TID7 509 aa28.68■■■□□ 2.18
CPNE1-203ENST00000397442 ANKS1BQ7Z6G8 1248 aa28.68■■■□□ 2.18
CPNE1-203ENST00000397442 SLC7A14Q8TBB6 771 aa28.68■■■□□ 2.18
CPNE1-203ENST00000397442 ADAM32Q8TC27 787 aa28.68■■■□□ 2.18
CPNE1-203ENST00000397442 RAPGEF5Q92565 580 aa28.68■■■□□ 2.18
CPNE1-203ENST00000397442 PGAP3Q96FM1 320 aaPredicted RBP28.68■■■□□ 2.18
CPNE1-203ENST00000397442 NKX2-4Q9H2Z4 354 aa28.68■■■□□ 2.18
CPNE1-203ENST00000397442 DDX56Q9NY93 547 aaKnown RBP28.68■■■□□ 2.18
CPNE1-203ENST00000397442 PGRMC1O00264 195 aaKnown RBP28.67■■■□□ 2.18
CPNE1-203ENST00000397442 PRPSAP2O60256 369 aa28.67■■■□□ 2.18
CPNE1-203ENST00000397442 ZRANB2O95218 330 aaKnown RBP eCLIP28.67■■■□□ 2.181e-6■■□□□ 12.9
CPNE1-203ENST00000397442 PAFAH1B1P43034 410 aa28.67■■■□□ 2.18
CPNE1-203ENST00000397442 ALDH1A3P47895 512 aa28.67■■■□□ 2.18
CPNE1-203ENST00000397442 BTBD8Q5XKL5 378 aa28.67■■■□□ 2.18
CPNE1-203ENST00000397442 SCYL2Q6P3W7 929 aa28.67■■■□□ 2.18
CPNE1-203ENST00000397442 CMASQ8NFW8 434 aaPredicted RBP28.67■■■□□ 2.18
CPNE1-203ENST00000397442 DQX1Q8TE96 717 aaKnown RBP28.67■■■□□ 2.18
CPNE1-203ENST00000397442 PIGVQ9NUD9 493 aa28.67■■■□□ 2.18
CPNE1-203ENST00000397442 FBXW11Q9UKB1 542 aa28.67■■■□□ 2.18
CPNE1-203ENST00000397442 FGGP02679 453 aa28.67■■■□□ 2.18
CPNE1-203ENST00000397442 ZDHHC11BP0C7U3 371 aa28.67■■■□□ 2.18
CPNE1-203ENST00000397442 KLRC2P26717 231 aa28.67■■■□□ 2.18
CPNE1-203ENST00000397442 TWF1Q12792 350 aa28.67■■■□□ 2.18
CPNE1-203ENST00000397442 GPM6BQ13491 265 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms