RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 LEMD2Q8NC56 503 aa24.64■■□□□ 1.54
TSPAN4-202ENST00000397396 STKLD1Q8NE28 680 aa24.64■■□□□ 1.54
TSPAN4-202ENST00000397396 RNF139Q8WU17 664 aa24.64■■□□□ 1.54
TSPAN4-202ENST00000397396 CASP10Q92851 521 aa24.64■■□□□ 1.54
TSPAN4-202ENST00000397396 BTBD6Q96KE9 485 aa24.64■■□□□ 1.54
TSPAN4-202ENST00000397396 TRIM7Q9C029 511 aa24.64■■□□□ 1.54
TSPAN4-202ENST00000397396 GMIPQ9P107 970 aa24.64■■□□□ 1.54
TSPAN4-202ENST00000397396 ALG6Q9Y672 507 aa24.64■■□□□ 1.54
TSPAN4-202ENST00000397396 MYO16Q9Y6X6 1858 aa24.64■■□□□ 1.53
TSPAN4-202ENST00000397396 CTAGE9A4FU28 777 aa24.63■■□□□ 1.53
TSPAN4-202ENST00000397396 NCAM1P13591 858 aa24.63■■□□□ 1.53
TSPAN4-202ENST00000397396 EPCAMP16422 314 aa24.63■■□□□ 1.53
TSPAN4-202ENST00000397396 HMGA1P17096 107 aaKnown RBP24.63■■□□□ 1.53
TSPAN4-202ENST00000397396 CASQ1P31415 396 aa24.63■■□□□ 1.53
TSPAN4-202ENST00000397396 NRIP1P48552 1158 aa24.63■■□□□ 1.53
TSPAN4-202ENST00000397396 MTMR3Q13615 1198 aa24.63■■□□□ 1.53
TSPAN4-202ENST00000397396 DCAF6Q58WW2 860 aa24.63■■□□□ 1.53
TSPAN4-202ENST00000397396 STRADAQ7RTN6 431 aa24.63■■□□□ 1.53
TSPAN4-202ENST00000397396 DNAJB7Q7Z6W7 309 aaPredicted RBP24.63■■□□□ 1.53
TSPAN4-202ENST00000397396 ADGRD2Q7Z7M1 963 aa24.63■■□□□ 1.53
TSPAN4-202ENST00000397396 RBM23Q86U06 439 aaKnown RBP24.63■■□□□ 1.53
TSPAN4-202ENST00000397396 NDRG1Q92597 394 aaKnown RBP24.63■■□□□ 1.53
TSPAN4-202ENST00000397396 GCNAQ96QF7 691 aa24.63■■□□□ 1.53
TSPAN4-202ENST00000397396 NAPGQ99747 312 aaPredicted RBP24.63■■□□□ 1.53
TSPAN4-202ENST00000397396 TRPM5Q9NZQ8 1165 aa24.63■■□□□ 1.53
TSPAN4-202ENST00000397396 MTCL1Q9Y4B5 1905 aaKnown RBP24.63■■□□□ 1.53
TSPAN4-202ENST00000397396 A0A1W2PQH9 124 aa24.62■■□□□ 1.53
TSPAN4-202ENST00000397396 PER2O15055 1255 aa24.62■■□□□ 1.53
TSPAN4-202ENST00000397396 ZDHHC11BP0C7U3 371 aa24.62■■□□□ 1.53
TSPAN4-202ENST00000397396 PCK1P35558 622 aa24.62■■□□□ 1.53
TSPAN4-202ENST00000397396 OGDHQ02218 1023 aa24.62■■□□□ 1.53
TSPAN4-202ENST00000397396 HADHQ16836 314 aaKnown RBP24.62■■□□□ 1.53
TSPAN4-202ENST00000397396 CCDC14Q49A88 953 aa24.62■■□□□ 1.53
TSPAN4-202ENST00000397396 SNX30Q5VWJ9 437 aa24.62■■□□□ 1.53
TSPAN4-202ENST00000397396 HFE2Q6ZVN8 426 aa24.62■■□□□ 1.53
TSPAN4-202ENST00000397396 ZNF276Q8N554 614 aa24.62■■□□□ 1.53
TSPAN4-202ENST00000397396 CFAP57Q96MR6 1250 aa24.62■■□□□ 1.53
TSPAN4-202ENST00000397396 DNAI1Q9UI46 699 aa24.62■■□□□ 1.53
TSPAN4-202ENST00000397396 SBDSQ9Y3A5 250 aaKnown RBP eCLIP24.62■■□□□ 1.53
TSPAN4-202ENST00000397396 FTCDO95954 541 aa24.61■■□□□ 1.53
TSPAN4-202ENST00000397396 F9P00740 461 aa24.61■■□□□ 1.53
TSPAN4-202ENST00000397396 COMTP21964 271 aa24.61■■□□□ 1.53
TSPAN4-202ENST00000397396 GBP1P32455 592 aa24.61■■□□□ 1.53
TSPAN4-202ENST00000397396 SULT1E1P49888 294 aa24.61■■□□□ 1.53
TSPAN4-202ENST00000397396 TUBP50607 506 aa24.61■■□□□ 1.53
TSPAN4-202ENST00000397396 ZNF252P-AS1Q0IIN9 211 aa24.61■■□□□ 1.53
TSPAN4-202ENST00000397396 SYT10Q6XYQ8 523 aa24.61■■□□□ 1.53
TSPAN4-202ENST00000397396 RSRC2Q7L4I2 434 aaKnown RBP24.61■■□□□ 1.53
TSPAN4-202ENST00000397396 SCD5Q86SK9 330 aa24.61■■□□□ 1.53
TSPAN4-202ENST00000397396 NT5DC3Q86UY8 548 aa24.61■■□□□ 1.53
TSPAN4-202ENST00000397396 UBL4BQ8N7F7 174 aa24.61■■□□□ 1.53
TSPAN4-202ENST00000397396 KIF18AQ8NI77 898 aa24.61■■□□□ 1.53
TSPAN4-202ENST00000397396 NT5C3BQ969T7 300 aa24.61■■□□□ 1.53
TSPAN4-202ENST00000397396 PGAP3Q96FM1 320 aaPredicted RBP24.61■■□□□ 1.53
TSPAN4-202ENST00000397396 ASAH2Q9NR71 780 aa24.61■■□□□ 1.53
TSPAN4-202ENST00000397396 GREB1Q4ZG55 1949 aa24.61■■□□□ 1.53
TSPAN4-202ENST00000397396 CCDC66A2RUB6 948 aa24.61■■□□□ 1.53
TSPAN4-202ENST00000397396 RFXAPO00287 272 aa24.61■■□□□ 1.53
TSPAN4-202ENST00000397396 CDC25CP30307 473 aa24.61■■□□□ 1.53
TSPAN4-202ENST00000397396 ZNF697Q5TEC3 545 aa24.61■■□□□ 1.53
TSPAN4-202ENST00000397396 MEI1Q5TIA1 1274 aa24.61■■□□□ 1.53
TSPAN4-202ENST00000397396 LRRC38Q5VT99 294 aa24.61■■□□□ 1.53
TSPAN4-202ENST00000397396 TRNP1Q6NT89 227 aa24.61■■□□□ 1.53
TSPAN4-202ENST00000397396 FAM172AQ8WUF8 416 aa24.61■■□□□ 1.53
TSPAN4-202ENST00000397396 CENPIQ92674 756 aaPredicted RBP24.61■■□□□ 1.53
TSPAN4-202ENST00000397396 WDR24Q96S15 920 aa24.61■■□□□ 1.53
TSPAN4-202ENST00000397396 NPY6RQ99463 290 aa24.61■■□□□ 1.53
TSPAN4-202ENST00000397396 SFXN1Q9H9B4 322 aa24.61■■□□□ 1.53
TSPAN4-202ENST00000397396 NAALADL1Q9UQQ1 740 aa24.61■■□□□ 1.53
TSPAN4-202ENST00000397396 PSTPIP1O43586 416 aa24.6■■□□□ 1.53
TSPAN4-202ENST00000397396 FYNP06241 537 aa24.6■■□□□ 1.53
TSPAN4-202ENST00000397396 CTNNA2P26232 953 aa24.6■■□□□ 1.53
TSPAN4-202ENST00000397396 RDXP35241 583 aaKnown RBP24.6■■□□□ 1.53
TSPAN4-202ENST00000397396 RPS6KA1Q15418 735 aa24.6■■□□□ 1.53
TSPAN4-202ENST00000397396 CC2D1AQ6P1N0 951 aaPredicted RBP24.6■■□□□ 1.53
TSPAN4-202ENST00000397396 MSANTD2Q6P1R3 559 aa24.6■■□□□ 1.53
TSPAN4-202ENST00000397396 SND1Q7KZF4 910 aaKnown RBP eCLIP24.6■■□□□ 1.535e-7■■■□□ 16.2
TSPAN4-202ENST00000397396 RHOT1Q8IXI2 618 aa24.6■■□□□ 1.53
TSPAN4-202ENST00000397396 CMASQ8NFW8 434 aaPredicted RBP24.6■■□□□ 1.53
TSPAN4-202ENST00000397396 EDEM1Q92611 657 aa24.6■■□□□ 1.53
TSPAN4-202ENST00000397396 SERPINB11Q96P15 392 aa24.6■■□□□ 1.53
TSPAN4-202ENST00000397396 SMOC2Q9H3U7 446 aa24.6■■□□□ 1.53
TSPAN4-202ENST00000397396 NMUR1Q9HB89 426 aa24.6■■□□□ 1.53
TSPAN4-202ENST00000397396 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.6■■□□□ 1.53
TSPAN4-202ENST00000397396 USTQ9Y2C2 406 aa24.6■■□□□ 1.53
TSPAN4-202ENST00000397396 ATG2AQ2TAZ0 1938 aa24.59■■□□□ 1.53
TSPAN4-202ENST00000397396 LRCH4O75427 683 aa24.59■■□□□ 1.53
TSPAN4-202ENST00000397396 ENDOD1O94919 500 aa24.59■■□□□ 1.53
TSPAN4-202ENST00000397396 PAPLNO95428 1278 aa24.59■■□□□ 1.53
TSPAN4-202ENST00000397396 RARGP13631 454 aa24.59■■□□□ 1.53
TSPAN4-202ENST00000397396 PTPN2P17706 415 aa24.59■■□□□ 1.53
TSPAN4-202ENST00000397396 PFKLP17858 780 aa24.59■■□□□ 1.53
TSPAN4-202ENST00000397396 CTNNA1P35221 906 aaKnown RBP24.59■■□□□ 1.53
TSPAN4-202ENST00000397396 SSR1P43307 286 aaKnown RBP24.59■■□□□ 1.53
TSPAN4-202ENST00000397396 ATP11AP98196 1134 aa24.59■■□□□ 1.53
TSPAN4-202ENST00000397396 CDO1Q16878 200 aa24.59■■□□□ 1.53
TSPAN4-202ENST00000397396 DNTTIP2Q5QJE6 756 aaKnown RBP24.59■■□□□ 1.53
TSPAN4-202ENST00000397396 KLHDC10Q6PID8 442 aa24.59■■□□□ 1.53
TSPAN4-202ENST00000397396 POLNQ7Z5Q5 900 aa24.59■■□□□ 1.53
TSPAN4-202ENST00000397396 EFHBQ8N7U6 833 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms