RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 ZMPSTE24O75844 475 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 CRYZL1O95825 349 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 RPA1P27694 616 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 HOXD13P35453 343 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 RAD23AP54725 363 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 NR1H2P55055 460 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 MSLNQ13421 630 aaPredicted RBP8.72□□□□□ -1.01
NDE1-202ENST00000396355 DNASE1L3Q13609 305 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 UBE2SQ16763 222 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 TRMT5Q32P41 509 aaKnown RBP8.72□□□□□ -1.01
NDE1-202ENST00000396355 COBLL1Q53SF7 1204 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 BSPRYQ5W0U4 402 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 KRT79Q5XKE5 535 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 JMJD4Q9H9V9 463 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 MAGEF1Q9HAY2 307 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 PKD2L1Q9P0L9 805 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 PLAGL2Q9UPG8 496 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 NOX1Q9Y5S8 564 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 DGKBQ9Y6T7 804 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 PODXLO00592 558 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 ATP9BO43861 1147 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 HLA-DOAP06340 250 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 SERPINH1P50454 418 aaKnown RBP8.72□□□□□ -1.01
NDE1-202ENST00000396355 EIF3EP60228 445 aaKnown RBP8.72□□□□□ -1.01
NDE1-202ENST00000396355 MRPS22P82650 360 aaKnown RBP8.72□□□□□ -1.01
NDE1-202ENST00000396355 GABPAQ06546 454 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 CCDC85BQ15834 202 aaPredicted RBP8.72□□□□□ -1.01
NDE1-202ENST00000396355 SHROOM1Q2M3G4 852 aaPredicted RBP8.72□□□□□ -1.01
NDE1-202ENST00000396355 PABPC1LQ4VXU2 614 aaKnown RBP8.72□□□□□ -1.01
NDE1-202ENST00000396355 RFPL4BQ6ZWI9 263 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 ANKRD13AQ8IZ07 590 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 MYO1HQ8N1T3 1032 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 MREGQ8N565 214 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 LARP4BQ92615 738 aaKnown RBP8.72□□□□□ -1.01
NDE1-202ENST00000396355 CENPTQ96BT3 561 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 PWWP2AQ96N64 755 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 C17orf80Q9BSJ5 609 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 MTMR4Q9NYA4 1195 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 PCSK1NQ9UHG2 260 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 NR2E3Q9Y5X4 410 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 AP4B1Q9Y6B7 739 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 PLIN4Q96Q06 1357 aa8.71□□□□□ -1.01
NDE1-202ENST00000396355 STMND1H3BQB6 276 aa8.71□□□□□ -1.01
NDE1-202ENST00000396355 TNFRSF21O75509 655 aa8.71□□□□□ -1.01
NDE1-202ENST00000396355 SNHG28P0DPA3 235 aa8.71□□□□□ -1.01
NDE1-202ENST00000396355 PRLRP16471 622 aa8.71□□□□□ -1.01
NDE1-202ENST00000396355 GNAZP19086 355 aa8.71□□□□□ -1.01
NDE1-202ENST00000396355 HOXD10P28358 340 aa8.71□□□□□ -1.01
NDE1-202ENST00000396355 GNA11P29992 359 aa8.71□□□□□ -1.01
NDE1-202ENST00000396355 NR4A2P43354 598 aa8.71□□□□□ -1.01
NDE1-202ENST00000396355 CCT3P49368 545 aaKnown RBP8.71□□□□□ -1.01
NDE1-202ENST00000396355 CTTNQ14247 550 aaKnown RBP8.71□□□□□ -1.01
NDE1-202ENST00000396355 SF3B4Q15427 424 aaKnown RBP eCLIP8.71□□□□□ -1.013e-6■□□□□ 9.3
NDE1-202ENST00000396355 CALCRLQ16602 461 aa8.71□□□□□ -1.01
NDE1-202ENST00000396355 DNAL1Q4LDG9 190 aa8.71□□□□□ -1.01
NDE1-202ENST00000396355 SLC45A4Q5BKX6 768 aa8.71□□□□□ -1.01
NDE1-202ENST00000396355 FIGNQ5HY92 759 aa8.71□□□□□ -1.01
NDE1-202ENST00000396355 DHDDSQ86SQ9 333 aa8.71□□□□□ -1.01
NDE1-202ENST00000396355 ZFP28Q8NHY6 868 aa8.71□□□□□ -1.01
NDE1-202ENST00000396355 ZSCAN18Q8TBC5 510 aaPredicted RBP8.71□□□□□ -1.01
NDE1-202ENST00000396355 BAP1Q92560 729 aa8.71□□□□□ -1.01
NDE1-202ENST00000396355 HAS1Q92839 578 aa8.71□□□□□ -1.01
NDE1-202ENST00000396355 MTG1Q9BT17 334 aaPredicted RBP8.71□□□□□ -1.01
NDE1-202ENST00000396355 REXO4Q9GZR2 422 aaKnown RBP8.71□□□□□ -1.01
NDE1-202ENST00000396355 DAGLAQ9Y4D2 1042 aa8.71□□□□□ -1.01
NDE1-202ENST00000396355 A0A1W2PQJ5 194 aa8.71□□□□□ -1.02
NDE1-202ENST00000396355 ESYT2A0FGR8 921 aa8.71□□□□□ -1.02
NDE1-202ENST00000396355 SNPHO15079 494 aa8.71□□□□□ -1.02
NDE1-202ENST00000396355 BMP10O95393 424 aa8.71□□□□□ -1.02
NDE1-202ENST00000396355 HNRNPH3P31942 346 aaKnown RBP8.71□□□□□ -1.02
NDE1-202ENST00000396355 FXR2P51116 673 aaKnown RBP eCLIP8.71□□□□□ -1.02
NDE1-202ENST00000396355 CDH15P55291 814 aa8.71□□□□□ -1.02
NDE1-202ENST00000396355 STX1BP61266 288 aa8.71□□□□□ -1.02
NDE1-202ENST00000396355 TUBA4AP68366 448 aa8.71□□□□□ -1.02
NDE1-202ENST00000396355 PCNX4Q63HM2 1172 aa8.71□□□□□ -1.02
NDE1-202ENST00000396355 TTBK2Q6IQ55 1244 aa8.71□□□□□ -1.02
NDE1-202ENST00000396355 ZNF746Q6NUN9 644 aaPredicted RBP8.71□□□□□ -1.02
NDE1-202ENST00000396355 RINT1Q6NUQ1 792 aa8.71□□□□□ -1.02
NDE1-202ENST00000396355 TRIM59Q8IWR1 403 aa8.71□□□□□ -1.02
NDE1-202ENST00000396355 PYROXD1Q8WU10 500 aa8.71□□□□□ -1.02
NDE1-202ENST00000396355 PPP1R10Q96QC0 940 aaKnown RBP8.71□□□□□ -1.02
NDE1-202ENST00000396355 C12orf65Q9H3J6 166 aaKnown RBP8.71□□□□□ -1.02
NDE1-202ENST00000396355 TDRD3Q9H7E2 651 aaKnown RBP8.71□□□□□ -1.02
NDE1-202ENST00000396355 AS3MTQ9HBK9 375 aa8.71□□□□□ -1.02
NDE1-202ENST00000396355 ZNF304Q9HCX3 659 aa8.71□□□□□ -1.02
NDE1-202ENST00000396355 UVRAGQ9P2Y5 699 aa8.71□□□□□ -1.02
NDE1-202ENST00000396355 STK39Q9UEW8 545 aa8.71□□□□□ -1.02
NDE1-202ENST00000396355 POU2F3Q9UKI9 436 aa8.71□□□□□ -1.02
NDE1-202ENST00000396355 PPM1HQ9ULR3 514 aa8.71□□□□□ -1.02
NDE1-202ENST00000396355 SMCHD1A6NHR9 2005 aa8.71□□□□□ -1.02
NDE1-202ENST00000396355 IGKV6D-41A0A0C4DH26 115 aa8.71□□□□□ -1.02
NDE1-202ENST00000396355 RAD51BO15315 384 aa8.71□□□□□ -1.02
NDE1-202ENST00000396355 ZNF862O60290 1169 aa8.71□□□□□ -1.02
NDE1-202ENST00000396355 LPXNO60711 386 aa8.71□□□□□ -1.02
NDE1-202ENST00000396355 MYCLP12524 364 aaPredicted RBP8.71□□□□□ -1.02
NDE1-202ENST00000396355 CCNCP24863 283 aa8.71□□□□□ -1.02
NDE1-202ENST00000396355 ADSLP30566 484 aaPredicted RBP8.71□□□□□ -1.02
NDE1-202ENST00000396355 TWF2Q6IBS0 349 aaKnown RBP8.71□□□□□ -1.02
NDE1-202ENST00000396355 ACAD11Q709F0 780 aa8.71□□□□□ -1.02
NDE1-202ENST00000396355 AKAP14Q86UN6 197 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms