RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 VTI1AQ96AJ9 217 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 THTPAQ9BU02 230 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 CCDC134Q9H6E4 229 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 PIDD1Q9HB75 910 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 IFT122Q9HBG6 1241 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 RABGEF1Q9UJ41 708 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 TCRBV5S1A1TA0A578 114 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 B2RBV5 119 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 PEX11AO75192 247 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 SMIM24O75264 130 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 LYPLA1O75608 230 aaPredicted RBP9.67□□□□□ -0.86
NDE1-201ENST00000396354 DCTN3O75935 186 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 TXNP10599 105 aaKnown RBP9.67□□□□□ -0.86
NDE1-201ENST00000396354 PHBP35232 272 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 MSX2P35548 267 aaPredicted RBP9.67□□□□□ -0.86
NDE1-201ENST00000396354 MCL1Q07820 350 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 PPIL2Q13356 520 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 UBAP2LQ14157 1087 aaKnown RBP9.67□□□□□ -0.86
NDE1-201ENST00000396354 TRMT10BQ6PF06 316 aaKnown RBP9.67□□□□□ -0.86
NDE1-201ENST00000396354 ARFGAP1Q8N6T3 406 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 CXorf38Q8TB03 319 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 NDRG1Q92597 394 aaKnown RBP9.67□□□□□ -0.86
NDE1-201ENST00000396354 SLC7A6OSQ96CW6 309 aaPredicted RBP9.67□□□□□ -0.86
NDE1-201ENST00000396354 NIF3L1Q9GZT8 377 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 EBF2Q9HAK2 575 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 NRBP2Q9NSY0 501 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 SLC5A4Q9NY91 659 aa9.67□□□□□ -0.86
NDE1-201ENST00000396354 DPPA5A6NC42 116 aa9.66□□□□□ -0.86
NDE1-201ENST00000396354 C22orf31O95567 290 aa9.66□□□□□ -0.86
NDE1-201ENST00000396354 AMPD1P23109 780 aa9.66□□□□□ -0.86
NDE1-201ENST00000396354 LMNB2Q03252 620 aa9.66□□□□□ -0.86
NDE1-201ENST00000396354 CHI3L2Q15782 390 aa9.66□□□□□ -0.86
NDE1-201ENST00000396354 HADHQ16836 314 aaKnown RBP9.66□□□□□ -0.86
NDE1-201ENST00000396354 RNF220Q5VTB9 566 aa9.66□□□□□ -0.86
NDE1-201ENST00000396354 FAM160B1Q5W0V3 765 aa9.66□□□□□ -0.86
NDE1-201ENST00000396354 TAPT1Q6NXT6 567 aa9.66□□□□□ -0.86
NDE1-201ENST00000396354 RINLQ6ZS11 566 aa9.66□□□□□ -0.86
NDE1-201ENST00000396354 C10orf82Q8WW14 230 aa9.66□□□□□ -0.86
NDE1-201ENST00000396354 AGAP3Q96P47 875 aa9.66□□□□□ -0.86
NDE1-201ENST00000396354 CADM1Q9BY67 442 aaKnown RBP9.66□□□□□ -0.86
NDE1-201ENST00000396354 CDT1Q9H211 546 aa9.66□□□□□ -0.86
NDE1-201ENST00000396354 RNPEPL1Q9HAU8 725 aa9.66□□□□□ -0.86
NDE1-201ENST00000396354 HES2Q9Y543 173 aa9.66□□□□□ -0.86
NDE1-201ENST00000396354 ZSWIM8A7E2V4 1837 aa9.66□□□□□ -0.86
NDE1-201ENST00000396354 MKI67P46013 3256 aaKnown RBP9.66□□□□□ -0.86
NDE1-201ENST00000396354 TXNDC9O14530 226 aa9.66□□□□□ -0.86
NDE1-201ENST00000396354 CXCL11O14625 94 aa9.66□□□□□ -0.86
NDE1-201ENST00000396354 STK10O94804 968 aaKnown RBP9.66□□□□□ -0.86
NDE1-201ENST00000396354 SORBS2O94875 1100 aaKnown RBP9.66□□□□□ -0.86
NDE1-201ENST00000396354 VTNP04004 478 aa9.66□□□□□ -0.86
NDE1-201ENST00000396354 CALB1P05937 261 aa9.66□□□□□ -0.86
NDE1-201ENST00000396354 PDGFRBP09619 1106 aa9.66□□□□□ -0.86
NDE1-201ENST00000396354 TGFB3P10600 412 aa9.66□□□□□ -0.86
NDE1-201ENST00000396354 RBL1P28749 1068 aa9.66□□□□□ -0.86
NDE1-201ENST00000396354 ENPEPQ07075 957 aa9.66□□□□□ -0.86
NDE1-201ENST00000396354 ZNF667Q5HYK9 610 aa9.66□□□□□ -0.86
NDE1-201ENST00000396354 EFCAB12Q6NXP0 572 aa9.66□□□□□ -0.86
NDE1-201ENST00000396354 ZPBP2Q6X784 338 aa9.66□□□□□ -0.86
NDE1-201ENST00000396354 ASRGL1Q7L266 308 aa9.66□□□□□ -0.86
NDE1-201ENST00000396354 ARMCX2Q7L311 632 aa9.66□□□□□ -0.86
NDE1-201ENST00000396354 PPIL6Q8IXY8 311 aa9.66□□□□□ -0.86
NDE1-201ENST00000396354 MRPL4Q9BYD3 311 aaKnown RBP9.66□□□□□ -0.86
NDE1-201ENST00000396354 KATNBL1Q9H079 304 aa9.66□□□□□ -0.86
NDE1-201ENST00000396354 GPBP1L1Q9HC44 474 aaPredicted RBP9.66□□□□□ -0.86
NDE1-201ENST00000396354 USP18Q9UMW8 372 aa9.66□□□□□ -0.86
NDE1-201ENST00000396354 DOCK3Q8IZD9 2030 aa9.66□□□□□ -0.86
NDE1-201ENST00000396354 GOLGA8TH3BQL2 631 aa9.65□□□□□ -0.86
NDE1-201ENST00000396354 USP12O75317 370 aa9.65□□□□□ -0.86
NDE1-201ENST00000396354 PDE5AO76074 875 aa9.65□□□□□ -0.86
NDE1-201ENST00000396354 CELF2O95319 508 aaKnown RBP9.65□□□□□ -0.86
NDE1-201ENST00000396354 ZBED1O96006 694 aa9.65□□□□□ -0.86
NDE1-201ENST00000396354 TNNC2P02585 160 aa9.65□□□□□ -0.86
NDE1-201ENST00000396354 HMGCRP04035 888 aa9.65□□□□□ -0.86
NDE1-201ENST00000396354 TFE3P19532 575 aaPredicted RBP9.65□□□□□ -0.86
NDE1-201ENST00000396354 KDELR1P24390 212 aa9.65□□□□□ -0.86
NDE1-201ENST00000396354 AQP5P55064 265 aa9.65□□□□□ -0.86
NDE1-201ENST00000396354 ROR1Q01973 937 aa9.65□□□□□ -0.86
NDE1-201ENST00000396354 MORF4L2Q15014 288 aa9.65□□□□□ -0.86
NDE1-201ENST00000396354 CCDC142Q17RM4 750 aa9.65□□□□□ -0.86
NDE1-201ENST00000396354 SLFN12LQ6IEE8 588 aa9.65□□□□□ -0.86
NDE1-201ENST00000396354 SYDE1Q6ZW31 735 aaPredicted RBP9.65□□□□□ -0.86
NDE1-201ENST00000396354 MPP5Q8N3R9 675 aa9.65□□□□□ -0.86
NDE1-201ENST00000396354 STK32AQ8WU08 396 aa9.65□□□□□ -0.86
NDE1-201ENST00000396354 PGBD4Q96DM1 585 aa9.65□□□□□ -0.86
NDE1-201ENST00000396354 SRPK1Q96SB4 655 aaKnown RBP9.65□□□□□ -0.86
NDE1-201ENST00000396354 FZD8Q9H461 694 aa9.65□□□□□ -0.86
NDE1-201ENST00000396354 TMPRSS4Q9NRS4 437 aa9.65□□□□□ -0.86
NDE1-201ENST00000396354 ZC3H7BQ9UGR2 993 aaKnown RBP9.65□□□□□ -0.86
NDE1-201ENST00000396354 AKT3Q9Y243 479 aa9.65□□□□□ -0.86
NDE1-201ENST00000396354 MFHAS1Q9Y4C4 1052 aa9.65□□□□□ -0.86
NDE1-201ENST00000396354 H0YCG3 227 aa9.65□□□□□ -0.86
NDE1-201ENST00000396354 FCHO1O14526 889 aa9.65□□□□□ -0.86
NDE1-201ENST00000396354 OGTO15294 1046 aa9.65□□□□□ -0.86
NDE1-201ENST00000396354 PRPSAP2O60256 369 aa9.65□□□□□ -0.86
NDE1-201ENST00000396354 TPBGLP0DKB5 382 aa9.65□□□□□ -0.86
NDE1-201ENST00000396354 CALB2P22676 271 aa9.65□□□□□ -0.86
NDE1-201ENST00000396354 TBXAS1P24557 533 aaPredicted RBP9.65□□□□□ -0.86
NDE1-201ENST00000396354 POLR2BP30876 1174 aaKnown RBP9.65□□□□□ -0.86
NDE1-201ENST00000396354 PGM1P36871 562 aa9.65□□□□□ -0.86
NDE1-201ENST00000396354 ADCYAP1R1P41586 468 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms