RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 SOX1O00570 391 aaPredicted RBP15.8■□□□□ 0.12
SCAF11-204ENST00000395454 DPYSL4O14531 572 aa15.8■□□□□ 0.12
SCAF11-204ENST00000395454 PPFIA2O75334 1257 aa15.8■□□□□ 0.12
SCAF11-204ENST00000395454 ECEL1O95672 775 aa15.8■□□□□ 0.12
SCAF11-204ENST00000395454 KRT7P08729 469 aa15.8■□□□□ 0.12
SCAF11-204ENST00000395454 PSMA2P25787 234 aa15.8■□□□□ 0.12
SCAF11-204ENST00000395454 PCSK1P29120 753 aa15.8■□□□□ 0.12
SCAF11-204ENST00000395454 CETN2P41208 172 aa15.8■□□□□ 0.12
SCAF11-204ENST00000395454 CDR1P51861 262 aa15.8■□□□□ 0.12
SCAF11-204ENST00000395454 ZNF143P52747 638 aaPredicted RBP15.8■□□□□ 0.12
SCAF11-204ENST00000395454 MRPL58Q14197 206 aaKnown RBP15.8■□□□□ 0.12
SCAF11-204ENST00000395454 TERF2Q15554 542 aa15.8■□□□□ 0.12
SCAF11-204ENST00000395454 OLFML1Q6UWY5 402 aa15.8■□□□□ 0.12
SCAF11-204ENST00000395454 ARCQ7LC44 396 aa15.8■□□□□ 0.12
SCAF11-204ENST00000395454 TMC3Q7Z5M5 1100 aa15.8■□□□□ 0.12
SCAF11-204ENST00000395454 OR10T2Q8NGX3 314 aa15.8■□□□□ 0.12
SCAF11-204ENST00000395454 UBA3Q8TBC4 463 aa15.8■□□□□ 0.12
SCAF11-204ENST00000395454 PKNOX2Q96KN3 472 aa15.8■□□□□ 0.12
SCAF11-204ENST00000395454 RTP3Q9BQQ7 232 aa15.8■□□□□ 0.12
SCAF11-204ENST00000395454 ACBD6Q9BR61 282 aa15.8■□□□□ 0.12
SCAF11-204ENST00000395454 DNAI2Q9GZS0 605 aa15.8■□□□□ 0.12
SCAF11-204ENST00000395454 FEZ2Q9UHY8 353 aaPredicted RBP15.8■□□□□ 0.12
SCAF11-204ENST00000395454 CDY1Q9Y6F8 540 aa15.8■□□□□ 0.12
SCAF11-204ENST00000395454 SPTBN5Q9NRC6 3674 aaKnown RBP15.8■□□□□ 0.12
SCAF11-204ENST00000395454 PRUNE2Q8WUY3 3088 aa15.8■□□□□ 0.12
SCAF11-204ENST00000395454 E5RJQ4 531 aa15.8■□□□□ 0.12
SCAF11-204ENST00000395454 H7C4K7 107 aa15.8■□□□□ 0.12
SCAF11-204ENST00000395454 CDKN2BP42772 138 aa15.8■□□□□ 0.12
SCAF11-204ENST00000395454 RPL21P46778 160 aaKnown RBP15.8■□□□□ 0.12
SCAF11-204ENST00000395454 PTK6Q13882 451 aa15.8■□□□□ 0.12
SCAF11-204ENST00000395454 CAMK1Q14012 370 aa15.8■□□□□ 0.12
SCAF11-204ENST00000395454 TXNRD3NBQ6F5E7 133 aa15.8■□□□□ 0.12
SCAF11-204ENST00000395454 SPOCD1Q6ZMY3 1216 aa15.8■□□□□ 0.12
SCAF11-204ENST00000395454 CCDC105Q8IYK2 499 aa15.8■□□□□ 0.12
SCAF11-204ENST00000395454 ANKRD52Q8NB46 1076 aa15.8■□□□□ 0.12
SCAF11-204ENST00000395454 GRK7Q8WTQ7 553 aa15.8■□□□□ 0.12
SCAF11-204ENST00000395454 LRCH3Q96II8 777 aa15.8■□□□□ 0.12
SCAF11-204ENST00000395454 TNIP3Q96KP6 325 aa15.8■□□□□ 0.12
SCAF11-204ENST00000395454 TMEM209Q96SK2 561 aa15.8■□□□□ 0.12
SCAF11-204ENST00000395454 FMO2Q99518 471 aa15.8■□□□□ 0.12
SCAF11-204ENST00000395454 SYT15Q9BQS2 421 aa15.8■□□□□ 0.12
SCAF11-204ENST00000395454 CNPY3Q9BT09 278 aa15.8■□□□□ 0.12
SCAF11-204ENST00000395454 DPH5Q9H2P9 285 aa15.8■□□□□ 0.12
SCAF11-204ENST00000395454 SSX2IPQ9Y2D8 614 aa15.8■□□□□ 0.12
SCAF11-204ENST00000395454 hCG_1818297A0A087WSY0 165 aa15.79■□□□□ 0.12
SCAF11-204ENST00000395454 HSF2BPO75031 334 aa15.79■□□□□ 0.12
SCAF11-204ENST00000395454 ATP2C2O75185 946 aa15.79■□□□□ 0.12
SCAF11-204ENST00000395454 CXCL14O95715 111 aa15.79■□□□□ 0.12
SCAF11-204ENST00000395454 KRT1P04264 644 aa15.79■□□□□ 0.12
SCAF11-204ENST00000395454 OR4Q2P0C623 313 aa15.79■□□□□ 0.12
SCAF11-204ENST00000395454 IRS1P35568 1242 aa15.79■□□□□ 0.12
SCAF11-204ENST00000395454 ARPP19P56211 112 aa15.79■□□□□ 0.12
SCAF11-204ENST00000395454 SNX16P57768 344 aa15.79■□□□□ 0.12
SCAF11-204ENST00000395454 TSPY1Q01534 308 aa15.79■□□□□ 0.12
SCAF11-204ENST00000395454 MTMR3Q13615 1198 aa15.79■□□□□ 0.12
SCAF11-204ENST00000395454 UAP1Q16222 522 aaPredicted RBP15.79■□□□□ 0.12
SCAF11-204ENST00000395454 TFDP3Q5H9I0 405 aa15.79■□□□□ 0.12
SCAF11-204ENST00000395454 PMF1Q6P1K2 205 aa15.79■□□□□ 0.12
SCAF11-204ENST00000395454 MFSD7Q6UXD7 560 aa15.79■□□□□ 0.12
SCAF11-204ENST00000395454 LRIG3Q6UXM1 1119 aa15.79■□□□□ 0.12
SCAF11-204ENST00000395454 RSPO2Q6UXX9 243 aaPredicted RBP15.79■□□□□ 0.12
SCAF11-204ENST00000395454 FAM183BPQ6ZVS7 135 aa15.79■□□□□ 0.12
SCAF11-204ENST00000395454 CCDC50Q8IVM0 306 aa15.79■□□□□ 0.12
SCAF11-204ENST00000395454 B3GALNT2Q8NCR0 500 aa15.79■□□□□ 0.12
SCAF11-204ENST00000395454 C1orf54Q8WWF1 131 aa15.79■□□□□ 0.12
SCAF11-204ENST00000395454 ZIM3Q96PE6 472 aa15.79■□□□□ 0.12
SCAF11-204ENST00000395454 NGRNQ9NPE2 291 aaKnown RBP15.79■□□□□ 0.12
SCAF11-204ENST00000395454 WHRNQ9P202 907 aa15.79■□□□□ 0.12
SCAF11-204ENST00000395454 MTRRQ9UBK8 725 aa15.79■□□□□ 0.12
SCAF11-204ENST00000395454 CDH9Q9ULB4 789 aa15.79■□□□□ 0.12
SCAF11-204ENST00000395454 R3HDM2Q9Y2K5 976 aaKnown RBP15.79■□□□□ 0.12
SCAF11-204ENST00000395454 HIDE1A8MVS5 230 aa15.78■□□□□ 0.12
SCAF11-204ENST00000395454 TP73O15350 636 aa15.78■□□□□ 0.12
SCAF11-204ENST00000395454 OPA1O60313 960 aa15.78■□□□□ 0.12
SCAF11-204ENST00000395454 GABBR2O75899 941 aa15.78■□□□□ 0.12
SCAF11-204ENST00000395454 TJP3O95049 919 aa15.78■□□□□ 0.12
SCAF11-204ENST00000395454 CPB1P15086 417 aa15.78■□□□□ 0.12
SCAF11-204ENST00000395454 IL1R2P27930 398 aa15.78■□□□□ 0.12
SCAF11-204ENST00000395454 BCAT1P54687 386 aa15.78■□□□□ 0.12
SCAF11-204ENST00000395454 CCDC142Q17RM4 750 aa15.78■□□□□ 0.12
SCAF11-204ENST00000395454 ATP13A4Q4VNC1 1196 aa15.78■□□□□ 0.12
SCAF11-204ENST00000395454 INTS6LQ5JSJ4 861 aaKnown RBP15.78■□□□□ 0.12
SCAF11-204ENST00000395454 CFAP58Q5T655 872 aa15.78■□□□□ 0.12
SCAF11-204ENST00000395454 FAM102AQ5T9C2 384 aaPredicted RBP15.78■□□□□ 0.12
SCAF11-204ENST00000395454 TRNP1Q6NT89 227 aa15.78■□□□□ 0.12
SCAF11-204ENST00000395454 CMASQ8NFW8 434 aaPredicted RBP15.78■□□□□ 0.12
SCAF11-204ENST00000395454 ATL2Q8NHH9 583 aa15.78■□□□□ 0.12
SCAF11-204ENST00000395454 KHSRPQ92945 711 aaKnown RBP eCLIP15.78■□□□□ 0.122e-6■■■■□ 20
SCAF11-204ENST00000395454 ART4Q93070 314 aa15.78■□□□□ 0.12
SCAF11-204ENST00000395454 TTYH1Q9H313 450 aaPredicted RBP15.78■□□□□ 0.12
SCAF11-204ENST00000395454 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.78■□□□□ 0.12
SCAF11-204ENST00000395454 HESX1Q9UBX0 185 aa15.78■□□□□ 0.12
SCAF11-204ENST00000395454 OR6C75A6NL08 312 aa15.78■□□□□ 0.12
SCAF11-204ENST00000395454 LPXNO60711 386 aa15.78■□□□□ 0.12
SCAF11-204ENST00000395454 RNF40O75150 1001 aa15.78■□□□□ 0.12
SCAF11-204ENST00000395454 IVDP26440 423 aa15.78■□□□□ 0.12
SCAF11-204ENST00000395454 OR1D2P34982 312 aa15.78■□□□□ 0.12
SCAF11-204ENST00000395454 FLT3P36888 993 aa15.78■□□□□ 0.12
SCAF11-204ENST00000395454 HSD17B3P37058 310 aa15.78■□□□□ 0.12
SCAF11-204ENST00000395454 KCNJ1P48048 391 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms