RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 CPQQ9Y646 472 aa14.33□□□□□ -0.12
SCAF11-203ENST00000395453 MYO16Q9Y6X6 1858 aa14.32□□□□□ -0.12
SCAF11-203ENST00000395453 KIAA1549LQ6ZVL6 1849 aa14.32□□□□□ -0.12
SCAF11-203ENST00000395453 SLC9A3R1O14745 358 aaPredicted RBP14.32□□□□□ -0.12
SCAF11-203ENST00000395453 DCLK1O15075 740 aa14.32□□□□□ -0.12
SCAF11-203ENST00000395453 COCHO43405 550 aa14.32□□□□□ -0.12
SCAF11-203ENST00000395453 ABL1P00519 1130 aa14.32□□□□□ -0.12
SCAF11-203ENST00000395453 TRIM49P0CI25 452 aa14.32□□□□□ -0.12
SCAF11-203ENST00000395453 TRIM49CP0CI26 452 aa14.32□□□□□ -0.12
SCAF11-203ENST00000395453 CCDC130P13994 396 aa14.32□□□□□ -0.12
SCAF11-203ENST00000395453 GBP1P32455 592 aa14.32□□□□□ -0.12
SCAF11-203ENST00000395453 OPRD1P41143 372 aa14.32□□□□□ -0.12
SCAF11-203ENST00000395453 PIK3CAP42336 1068 aa14.32□□□□□ -0.12
SCAF11-203ENST00000395453 GCLMP48507 274 aa14.32□□□□□ -0.12
SCAF11-203ENST00000395453 TUBP50607 506 aa14.32□□□□□ -0.12
SCAF11-203ENST00000395453 SLC5A3P53794 718 aa14.32□□□□□ -0.12
SCAF11-203ENST00000395453 IFRD2Q12894 506 aaPredicted RBP14.32□□□□□ -0.12
SCAF11-203ENST00000395453 SYT13Q7L8C5 426 aa14.32□□□□□ -0.12
SCAF11-203ENST00000395453 FILIP1Q7Z7B0 1213 aa14.32□□□□□ -0.12
SCAF11-203ENST00000395453 DDX42Q86XP3 938 aaKnown RBP eCLIP14.32□□□□□ -0.12
SCAF11-203ENST00000395453 ENGASEQ8NFI3 743 aa14.32□□□□□ -0.12
SCAF11-203ENST00000395453 SLC2A14Q8TDB8 520 aa14.32□□□□□ -0.12
SCAF11-203ENST00000395453 TAS1R2Q8TE23 839 aa14.32□□□□□ -0.12
SCAF11-203ENST00000395453 HNRNPABQ99729 332 aaKnown RBP14.32□□□□□ -0.12
SCAF11-203ENST00000395453 DUSP9Q99956 384 aaKnown RBP14.32□□□□□ -0.12
SCAF11-203ENST00000395453 KRT82Q9NSB4 513 aa14.32□□□□□ -0.12
SCAF11-203ENST00000395453 NEUROG3Q9Y4Z2 214 aa14.32□□□□□ -0.12
SCAF11-203ENST00000395453 MYH10P35580 1976 aa14.31□□□□□ -0.12
SCAF11-203ENST00000395453 E2F8A0AVK6 867 aa14.31□□□□□ -0.12
SCAF11-203ENST00000395453 K7EQS6 105 aa14.31□□□□□ -0.12
SCAF11-203ENST00000395453 CDX4O14627 284 aaPredicted RBP14.31□□□□□ -0.12
SCAF11-203ENST00000395453 CYP17A1P05093 508 aa14.31□□□□□ -0.12
SCAF11-203ENST00000395453 KRT13P13646 458 aa14.31□□□□□ -0.12
SCAF11-203ENST00000395453 GTF2H1P32780 548 aa14.31□□□□□ -0.12
SCAF11-203ENST00000395453 ORC1Q13415 861 aa14.31□□□□□ -0.12
SCAF11-203ENST00000395453 PNOCQ13519 176 aa14.31□□□□□ -0.12
SCAF11-203ENST00000395453 COBLL1Q53SF7 1204 aa14.31□□□□□ -0.12
SCAF11-203ENST00000395453 HECTD3Q5T447 861 aa14.31□□□□□ -0.12
SCAF11-203ENST00000395453 RHBDF2Q6PJF5 856 aa14.31□□□□□ -0.12
SCAF11-203ENST00000395453 SMYD4Q8IYR2 804 aaPredicted RBP14.31□□□□□ -0.12
SCAF11-203ENST00000395453 SPATA20Q8TB22 786 aa14.31□□□□□ -0.12
SCAF11-203ENST00000395453 WHAMMQ8TF30 809 aa14.31□□□□□ -0.12
SCAF11-203ENST00000395453 CCDC34Q96HJ3 373 aa14.31□□□□□ -0.12
SCAF11-203ENST00000395453 FAXDC2Q96IV6 333 aa14.31□□□□□ -0.12
SCAF11-203ENST00000395453 TWNKQ96RR1 684 aa14.31□□□□□ -0.12
SCAF11-203ENST00000395453 TMEM8AQ9HCN3 771 aa14.31□□□□□ -0.12
SCAF11-203ENST00000395453 POLR3BQ9NW08 1133 aaPredicted RBP14.31□□□□□ -0.12
SCAF11-203ENST00000395453 SMPD4Q9NXE4 827 aa14.31□□□□□ -0.12
SCAF11-203ENST00000395453 CFAP97Q9P2B7 532 aa14.31□□□□□ -0.12
SCAF11-203ENST00000395453 MYOFQ9NZM1 2061 aa14.3□□□□□ -0.12
SCAF11-203ENST00000395453 A0A0A0MRY4 1105 aa14.3□□□□□ -0.12
SCAF11-203ENST00000395453 HHLA1C9JL84 531 aa14.3□□□□□ -0.12
SCAF11-203ENST00000395453 CILPO75339 1184 aa14.3□□□□□ -0.12
SCAF11-203ENST00000395453 CLSTN1O94985 981 aa14.3□□□□□ -0.12
SCAF11-203ENST00000395453 MBL2P11226 248 aaPredicted RBP14.3□□□□□ -0.12
SCAF11-203ENST00000395453 PRCPP42785 496 aa14.3□□□□□ -0.12
SCAF11-203ENST00000395453 PGFP49763 221 aa14.3□□□□□ -0.12
SCAF11-203ENST00000395453 MAP3K7CLP57077 242 aa14.3□□□□□ -0.12
SCAF11-203ENST00000395453 DHCR24Q15392 516 aa14.3□□□□□ -0.12
SCAF11-203ENST00000395453 UAP1L1Q3KQV9 507 aa14.3□□□□□ -0.12
SCAF11-203ENST00000395453 USP39Q53GS9 565 aaKnown RBP14.3□□□□□ -0.12
SCAF11-203ENST00000395453 RPLP0P6Q8NHW5 317 aa14.3□□□□□ -0.12
SCAF11-203ENST00000395453 CCDC26Q8TAB7 109 aa14.3□□□□□ -0.12
SCAF11-203ENST00000395453 USP33Q8TEY7 942 aa14.3□□□□□ -0.12
SCAF11-203ENST00000395453 ACDQ96AP0 544 aa14.3□□□□□ -0.12
SCAF11-203ENST00000395453 OTUB2Q96DC9 234 aa14.3□□□□□ -0.12
SCAF11-203ENST00000395453 CYFIP2Q96F07 1278 aa14.3□□□□□ -0.12
SCAF11-203ENST00000395453 GSDMAQ96QA5 445 aa14.3□□□□□ -0.12
SCAF11-203ENST00000395453 NT5C1AQ9BXI3 368 aa14.3□□□□□ -0.12
SCAF11-203ENST00000395453 IMPG2Q9BZV3 1241 aa14.3□□□□□ -0.12
SCAF11-203ENST00000395453 NIF3L1Q9GZT8 377 aa14.3□□□□□ -0.12
SCAF11-203ENST00000395453 FBXO44Q9H4M3 255 aa14.3□□□□□ -0.12
SCAF11-203ENST00000395453 SLC32A1Q9H598 525 aa14.3□□□□□ -0.12
SCAF11-203ENST00000395453 CCSER2Q9H7U1 834 aa14.3□□□□□ -0.12
SCAF11-203ENST00000395453 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.3□□□□□ -0.125e-7■■■■■ 40.9
SCAF11-203ENST00000395453 FAM49BQ9NUQ9 324 aa14.3□□□□□ -0.12
SCAF11-203ENST00000395453 GMIPQ9P107 970 aa14.3□□□□□ -0.12
SCAF11-203ENST00000395453 TBC1D14Q9P2M4 693 aa14.3□□□□□ -0.12
SCAF11-203ENST00000395453 MSRB2Q9Y3D2 182 aa14.3□□□□□ -0.12
SCAF11-203ENST00000395453 FREM2Q5SZK8 3169 aa14.3□□□□□ -0.12
SCAF11-203ENST00000395453 ABCA7Q8IZY2 2146 aa14.3□□□□□ -0.12
SCAF11-203ENST00000395453 NUP205Q92621 2012 aa14.29□□□□□ -0.12
SCAF11-203ENST00000395453 TAF4O00268 1085 aa14.29□□□□□ -0.12
SCAF11-203ENST00000395453 FAM200BP0CF97 657 aa14.29□□□□□ -0.12
SCAF11-203ENST00000395453 EIF2DP41214 584 aaKnown RBP14.29□□□□□ -0.12
SCAF11-203ENST00000395453 DGKEP52429 567 aa14.29□□□□□ -0.12
SCAF11-203ENST00000395453 DMC1Q14565 340 aa14.29□□□□□ -0.12
SCAF11-203ENST00000395453 PMS2CLQ68D20 193 aa14.29□□□□□ -0.12
SCAF11-203ENST00000395453 KRT39Q6A163 491 aa14.29□□□□□ -0.12
SCAF11-203ENST00000395453 CLEC20AQ6ZU45 233 aa14.29□□□□□ -0.12
SCAF11-203ENST00000395453 CYP2U1Q7Z449 544 aa14.29□□□□□ -0.12
SCAF11-203ENST00000395453 ZC3H3Q8IXZ2 948 aaKnown RBP14.29□□□□□ -0.12
SCAF11-203ENST00000395453 DEFB124Q8NES8 71 aa14.29□□□□□ -0.12
SCAF11-203ENST00000395453 SEMA4DQ92854 862 aa14.29□□□□□ -0.12
SCAF11-203ENST00000395453 EEF2KMTQ96G04 330 aa14.29□□□□□ -0.12
SCAF11-203ENST00000395453 PNPLA8Q9NP80 782 aa14.29□□□□□ -0.12
SCAF11-203ENST00000395453 RMND1Q9NWS8 449 aa14.29□□□□□ -0.12
SCAF11-203ENST00000395453 SCML2Q9UQR0 700 aa14.29□□□□□ -0.12
SCAF11-203ENST00000395453 ASCC3Q8N3C0 2202 aaKnown RBP14.29□□□□□ -0.12
SCAF11-203ENST00000395453 PCNX2A6NKB5 2137 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms