RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 APOBEC3FQ8IUX4 373 aaKnown RBP12.61□□□□□ -0.39
SIN3A-202ENST00000394947 THAP2Q9H0W7 228 aa12.61□□□□□ -0.39
SIN3A-202ENST00000394947 VPS45Q9NRW7 570 aa12.61□□□□□ -0.39
SIN3A-202ENST00000394947 KBTBD2Q8IY47 623 aa12.61□□□□□ -0.39
SIN3A-202ENST00000394947 PPP2R3CQ969Q6 453 aa12.61□□□□□ -0.39
SIN3A-202ENST00000394947 STK33Q9BYT3 514 aa12.61□□□□□ -0.39
SIN3A-202ENST00000394947 KCNF1Q9H3M0 494 aa12.61□□□□□ -0.39
SIN3A-202ENST00000394947 CASTOR2A6NHX0 329 aa12.61□□□□□ -0.39
SIN3A-202ENST00000394947 F5H5T6 163 aa12.61□□□□□ -0.39
SIN3A-202ENST00000394947 PER1O15534 1290 aaPredicted RBP12.61□□□□□ -0.39
SIN3A-202ENST00000394947 RBP3P10745 1247 aa12.61□□□□□ -0.39
SIN3A-202ENST00000394947 KCNMA1Q12791 1236 aa12.61□□□□□ -0.39
SIN3A-202ENST00000394947 BOP1Q14137 746 aaKnown RBP12.61□□□□□ -0.39
SIN3A-202ENST00000394947 KCTD19Q17RG1 926 aaPredicted RBP12.61□□□□□ -0.39
SIN3A-202ENST00000394947 DPP3Q9NY33 737 aa12.61□□□□□ -0.39
SIN3A-202ENST00000394947 KLHL3Q9UH77 587 aa12.61□□□□□ -0.39
SIN3A-202ENST00000394947 TIMM13Q9Y5L4 95 aaPredicted RBP12.61□□□□□ -0.39
SIN3A-202ENST00000394947 MAGEA13PA6NCF6 341 aa12.6□□□□□ -0.39
SIN3A-202ENST00000394947 CDH16O75309 829 aa12.6□□□□□ -0.39
SIN3A-202ENST00000394947 AP1G2O75843 785 aa12.6□□□□□ -0.39
SIN3A-202ENST00000394947 EYA4O95677 639 aa12.6□□□□□ -0.39
SIN3A-202ENST00000394947 CACNA2D1P54289 1103 aa12.6□□□□□ -0.39
SIN3A-202ENST00000394947 NR6A1Q15406 480 aa12.6□□□□□ -0.39
SIN3A-202ENST00000394947 AP5B1Q2VPB7 878 aa12.6□□□□□ -0.39
SIN3A-202ENST00000394947 PPP1R26Q5T8A7 1209 aaPredicted RBP12.6□□□□□ -0.39
SIN3A-202ENST00000394947 PPIL6Q8IXY8 311 aa12.6□□□□□ -0.39
SIN3A-202ENST00000394947 FAM120BQ96EK7 910 aaKnown RBP12.6□□□□□ -0.39
SIN3A-202ENST00000394947 TMEM237Q96Q45 408 aa12.6□□□□□ -0.39
SIN3A-202ENST00000394947 CAMKK2Q96RR4 588 aa12.6□□□□□ -0.39
SIN3A-202ENST00000394947 KLHL4Q9C0H6 718 aa12.6□□□□□ -0.39
SIN3A-202ENST00000394947 KHDRBS3O75525 346 aaKnown RBP12.6□□□□□ -0.39
SIN3A-202ENST00000394947 EN1Q05925 392 aaPredicted RBP12.6□□□□□ -0.39
SIN3A-202ENST00000394947 CDC73Q6P1J9 531 aa12.6□□□□□ -0.39
SIN3A-202ENST00000394947 BNC2Q6ZN30 1099 aaPredicted RBP12.6□□□□□ -0.39
SIN3A-202ENST00000394947 MICALL2Q8IY33 904 aa12.6□□□□□ -0.39
SIN3A-202ENST00000394947 FBXO32Q969P5 355 aa12.6□□□□□ -0.39
SIN3A-202ENST00000394947 FANCEQ9HB96 536 aa12.6□□□□□ -0.39
SIN3A-202ENST00000394947 VPS28Q9UK41 221 aa12.6□□□□□ -0.39
SIN3A-202ENST00000394947 CUL7Q14999 1698 aa12.6□□□□□ -0.39
SIN3A-202ENST00000394947 PALLDQ8WX93 1383 aa12.6□□□□□ -0.39
SIN3A-202ENST00000394947 PVALEFA0A1B0GWK0 134 aa12.6□□□□□ -0.39
SIN3A-202ENST00000394947 SYNCRIPO60506 623 aaKnown RBP12.6□□□□□ -0.39
SIN3A-202ENST00000394947 VAV1P15498 845 aa12.6□□□□□ -0.39
SIN3A-202ENST00000394947 GLB1LQ6UWU2 654 aa12.6□□□□□ -0.39
SIN3A-202ENST00000394947 METTL16Q86W50 562 aaKnown RBP12.6□□□□□ -0.39
SIN3A-202ENST00000394947 DPF3Q92784 378 aa12.6□□□□□ -0.39
SIN3A-202ENST00000394947 MYLK2Q9H1R3 596 aa12.6□□□□□ -0.39
SIN3A-202ENST00000394947 TMEM138Q9NPI0 162 aa12.6□□□□□ -0.39
SIN3A-202ENST00000394947 PFASO15067 1338 aa12.6□□□□□ -0.39
SIN3A-202ENST00000394947 ASB14A6NK59 587 aa12.6□□□□□ -0.39
SIN3A-202ENST00000394947 BTN3A3O00478 584 aa12.6□□□□□ -0.39
SIN3A-202ENST00000394947 CKBP12277 381 aa12.6□□□□□ -0.39
SIN3A-202ENST00000394947 COILP38432 576 aaPredicted RBP12.6□□□□□ -0.39
SIN3A-202ENST00000394947 POU6F1Q14863 301 aa12.6□□□□□ -0.39
SIN3A-202ENST00000394947 SLC18A3Q16572 532 aa12.6□□□□□ -0.39
SIN3A-202ENST00000394947 VIPAS39Q9H9C1 493 aa12.6□□□□□ -0.39
SIN3A-202ENST00000394947 KRT33AO76009 404 aa12.6□□□□□ -0.39
SIN3A-202ENST00000394947 CNPP09543 421 aaKnown RBP12.6□□□□□ -0.39
SIN3A-202ENST00000394947 ARF3P61204 181 aaPredicted RBP12.6□□□□□ -0.39
SIN3A-202ENST00000394947 ARF1P84077 181 aaKnown RBP12.6□□□□□ -0.39
SIN3A-202ENST00000394947 C1DQ13901 141 aaKnown RBP12.6□□□□□ -0.39
SIN3A-202ENST00000394947 NT5DC4Q86YG4 428 aa12.6□□□□□ -0.39
SIN3A-202ENST00000394947 CYP4Z2PQ8N1L4 340 aa12.6□□□□□ -0.39
SIN3A-202ENST00000394947 HIC2Q96JB3 615 aa12.6□□□□□ -0.39
SIN3A-202ENST00000394947 PGLYRP2Q96PD5 576 aa12.6□□□□□ -0.39
SIN3A-202ENST00000394947 TMEM121Q9BTD3 319 aa12.6□□□□□ -0.39
SIN3A-202ENST00000394947 UBXN6Q9BZV1 441 aa12.6□□□□□ -0.39
SIN3A-202ENST00000394947 GPR108Q9NPR9 543 aa12.6□□□□□ -0.39
SIN3A-202ENST00000394947 UVRAGQ9P2Y5 699 aa12.6□□□□□ -0.39
SIN3A-202ENST00000394947 INPP4BO15327 924 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 TSPAN9O75954 239 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 TCEA1P23193 301 aaKnown RBP12.59□□□□□ -0.39
SIN3A-202ENST00000394947 CASP12Q6UXS9 341 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 PODNQ7Z5L7 613 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 FAM20CQ8IXL6 584 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 FEZF2Q8TBJ5 459 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 PPP1R13LQ8WUF5 828 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 CASKIN2Q8WXE0 1202 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 RPRD1BQ9NQG5 326 aaKnown RBP12.59□□□□□ -0.39
SIN3A-202ENST00000394947 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.59□□□□□ -0.39
SIN3A-202ENST00000394947 TIMM44O43615 452 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 KRT6AP02538 564 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 KRT6BP04259 564 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 CKMP06732 381 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 TSPAN19P0C672 248 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 CYP2C9P11712 490 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 KRT6CP48668 564 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 FXR1P51114 621 aaKnown RBP eCLIP12.59□□□□□ -0.39
SIN3A-202ENST00000394947 CALR3Q96L12 384 aaKnown RBP12.59□□□□□ -0.39
SIN3A-202ENST00000394947 SLITRK1Q96PX8 696 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 ARMC7Q9H6L4 198 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 MORC2Q9Y6X9 1032 aaPredicted RBP12.59□□□□□ -0.39
SIN3A-202ENST00000394947 MYMKA6NI61 221 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 GUCY1B2O75343 617 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 CYP2F1P24903 491 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 PIK3R1P27986 724 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 HSD17B3P37058 310 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 DPYDQ12882 1025 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 LAMB3Q13751 1172 aa12.59□□□□□ -0.39
SIN3A-202ENST00000394947 ERMARDQ5T6L9 678 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms