RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 NRDE2Q9H7Z3 1164 aa14.88□□□□□ -0.03
MKS1-203ENST00000393120 SSU72Q9NP77 194 aaKnown RBP14.88□□□□□ -0.03
MKS1-203ENST00000393120 SLC38A7Q9NVC3 462 aa14.88□□□□□ -0.03
MKS1-203ENST00000393120 GPATCH2LQ9NWQ4 482 aa14.88□□□□□ -0.03
MKS1-203ENST00000393120 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.88□□□□□ -0.03
MKS1-203ENST00000393120 SAMD15Q9P1V8 674 aa14.88□□□□□ -0.03
MKS1-203ENST00000393120 PSMC3IPQ9P2W1 217 aaPredicted RBP14.88□□□□□ -0.03
MKS1-203ENST00000393120 TCRBV7S3A2A0A539 114 aa14.88□□□□□ -0.03
MKS1-203ENST00000393120 FOXO6A8MYZ6 492 aa14.88□□□□□ -0.03
MKS1-203ENST00000393120 RPLP2P05387 115 aaKnown RBP14.88□□□□□ -0.03
MKS1-203ENST00000393120 MATKP42679 507 aa14.88□□□□□ -0.03
MKS1-203ENST00000393120 SLC8A3P57103 927 aa14.88□□□□□ -0.03
MKS1-203ENST00000393120 LACTB2Q53H82 288 aaPredicted RBP14.88□□□□□ -0.03
MKS1-203ENST00000393120 CHADLQ6NUI6 762 aa14.88□□□□□ -0.03
MKS1-203ENST00000393120 RGMBQ6NW40 437 aa14.88□□□□□ -0.03
MKS1-203ENST00000393120 C3orf62Q6ZUJ4 267 aa14.88□□□□□ -0.03
MKS1-203ENST00000393120 RPAINQ86UA6 219 aa14.88□□□□□ -0.03
MKS1-203ENST00000393120 CLEC4CQ8WTT0 213 aa14.88□□□□□ -0.03
MKS1-203ENST00000393120 MAGEB18Q96M61 343 aa14.88□□□□□ -0.03
MKS1-203ENST00000393120 ACTR5Q9H9F9 607 aaPredicted RBP14.88□□□□□ -0.03
MKS1-203ENST00000393120 GOLGA2P5Q9HBQ8 144 aa14.88□□□□□ -0.03
MKS1-203ENST00000393120 SMG5Q9UPR3 1016 aaKnown RBP14.88□□□□□ -0.03
MKS1-203ENST00000393120 POC1B-GALNT4F8VUJ3 575 aa14.87□□□□□ -0.03
MKS1-203ENST00000393120 M0QZ92 97 aa14.87□□□□□ -0.03
MKS1-203ENST00000393120 CYB561D2O14569 222 aa14.87□□□□□ -0.03
MKS1-203ENST00000393120 SPAG6O75602 509 aa14.87□□□□□ -0.03
MKS1-203ENST00000393120 GHRP10912 638 aa14.87□□□□□ -0.03
MKS1-203ENST00000393120 LCP1P13796 627 aa14.87□□□□□ -0.03
MKS1-203ENST00000393120 ATP2A2P16615 1042 aaKnown RBP14.87□□□□□ -0.03
MKS1-203ENST00000393120 PTPN1P18031 435 aaKnown RBP14.87□□□□□ -0.03
MKS1-203ENST00000393120 TFE3P19532 575 aaPredicted RBP14.87□□□□□ -0.03
MKS1-203ENST00000393120 CYP2F1P24903 491 aa14.87□□□□□ -0.03
MKS1-203ENST00000393120 BASP1P80723 227 aaKnown RBP14.87□□□□□ -0.03
MKS1-203ENST00000393120 LRRC14Q15048 493 aa14.87□□□□□ -0.03
MKS1-203ENST00000393120 RNF187Q5TA31 235 aaPredicted RBP14.87□□□□□ -0.03
MKS1-203ENST00000393120 ADGRD1Q6QNK2 874 aa14.87□□□□□ -0.03
MKS1-203ENST00000393120 RSPH3Q86UC2 560 aa14.87□□□□□ -0.03
MKS1-203ENST00000393120 OSTM1Q86WC4 334 aa14.87□□□□□ -0.03
MKS1-203ENST00000393120 ANKMY2Q8IV38 441 aa14.87□□□□□ -0.03
MKS1-203ENST00000393120 FUKQ8N0W3 1084 aa14.87□□□□□ -0.03
MKS1-203ENST00000393120 FBXO36Q8NEA4 188 aa14.87□□□□□ -0.03
MKS1-203ENST00000393120 DENND1AQ8TEH3 1009 aa14.87□□□□□ -0.03
MKS1-203ENST00000393120 CCT6BQ92526 530 aa14.87□□□□□ -0.03
MKS1-203ENST00000393120 MTMR10Q9NXD2 777 aa14.87□□□□□ -0.03
MKS1-203ENST00000393120 RCOR3Q9P2K3 495 aaPredicted RBP14.87□□□□□ -0.03
MKS1-203ENST00000393120 TRPV2Q9Y5S1 764 aa14.87□□□□□ -0.03
MKS1-203ENST00000393120 TCP11X1B4DZS4 312 aa14.86□□□□□ -0.03
MKS1-203ENST00000393120 OAS1P00973 400 aaKnown RBP14.86□□□□□ -0.03
MKS1-203ENST00000393120 SLC10A3P09131 477 aa14.86□□□□□ -0.03
MKS1-203ENST00000393120 TKTP29401 623 aaKnown RBP14.86□□□□□ -0.03
MKS1-203ENST00000393120 STX2P32856 288 aa14.86□□□□□ -0.03
MKS1-203ENST00000393120 LIG3P49916 1009 aa14.86□□□□□ -0.03
MKS1-203ENST00000393120 SLC25A52Q3SY17 297 aa14.86□□□□□ -0.03
MKS1-203ENST00000393120 BNIPLQ7Z465 357 aa14.86□□□□□ -0.03
MKS1-203ENST00000393120 SAPCD2Q86UD0 394 aa14.86□□□□□ -0.03
MKS1-203ENST00000393120 PIGZQ86VD9 579 aa14.86□□□□□ -0.03
MKS1-203ENST00000393120 TAX1BP1Q86VP1 789 aa14.86□□□□□ -0.03
MKS1-203ENST00000393120 CDKL3Q8IVW4 592 aaPredicted RBP14.86□□□□□ -0.03
MKS1-203ENST00000393120 PALM2Q8IXS6 379 aa14.86□□□□□ -0.03
MKS1-203ENST00000393120 HACE1Q8IYU2 909 aa14.86□□□□□ -0.03
MKS1-203ENST00000393120 DOCK3Q8IZD9 2030 aa14.86□□□□□ -0.03
MKS1-203ENST00000393120 ANKRD42Q8N9B4 389 aa14.86□□□□□ -0.03
MKS1-203ENST00000393120 TRPV1Q8NER1 839 aa14.86□□□□□ -0.03
MKS1-203ENST00000393120 MGARPQ8TDB4 240 aa14.86□□□□□ -0.03
MKS1-203ENST00000393120 NT5C3BQ969T7 300 aa14.86□□□□□ -0.03
MKS1-203ENST00000393120 ADAM33Q9BZ11 813 aa14.86□□□□□ -0.03
MKS1-203ENST00000393120 OSBPL7Q9BZF2 842 aa14.86□□□□□ -0.03
MKS1-203ENST00000393120 UPF3AQ9H1J1 476 aaKnown RBP14.86□□□□□ -0.03
MKS1-203ENST00000393120 TSPYL2Q9H2G4 693 aaPredicted RBP14.86□□□□□ -0.03
MKS1-203ENST00000393120 TRABDQ9H4I3 376 aa14.86□□□□□ -0.03
MKS1-203ENST00000393120 CDY2AQ9Y6F7 541 aa14.86□□□□□ -0.03
MKS1-203ENST00000393120 TEX264Q9Y6I9 313 aa14.86□□□□□ -0.03
MKS1-203ENST00000393120 CCT8L1PA6NM43 557 aa14.86□□□□□ -0.03
MKS1-203ENST00000393120 KCNN4O15554 427 aa14.86□□□□□ -0.03
MKS1-203ENST00000393120 SNX3O60493 162 aa14.86□□□□□ -0.03
MKS1-203ENST00000393120 BANF1O75531 89 aa14.86□□□□□ -0.03
MKS1-203ENST00000393120 DAB1O75553 588 aa14.86□□□□□ -0.03
MKS1-203ENST00000393120 GCATO75600 419 aa14.86□□□□□ -0.03
MKS1-203ENST00000393120 ZBED1O96006 694 aa14.86□□□□□ -0.03
MKS1-203ENST00000393120 C6orf222P0C671 652 aaPredicted RBP14.86□□□□□ -0.03
MKS1-203ENST00000393120 RBL1P28749 1068 aa14.86□□□□□ -0.03
MKS1-203ENST00000393120 SSTR1P30872 391 aa14.86□□□□□ -0.03
MKS1-203ENST00000393120 MRPS5P82675 430 aaKnown RBP14.86□□□□□ -0.03
MKS1-203ENST00000393120 IL9RQ01113 521 aa14.86□□□□□ -0.03
MKS1-203ENST00000393120 ACTN3Q08043 901 aaPredicted RBP14.86□□□□□ -0.03
MKS1-203ENST00000393120 ADCY1Q08828 1119 aa14.86□□□□□ -0.03
MKS1-203ENST00000393120 PKN2Q16513 984 aaKnown RBP14.86□□□□□ -0.03
MKS1-203ENST00000393120 BBS9Q3SYG4 887 aa14.86□□□□□ -0.03
MKS1-203ENST00000393120 TMEM86AQ8N2M4 240 aa14.86□□□□□ -0.03
MKS1-203ENST00000393120 GSTCDQ8NEC7 633 aa14.86□□□□□ -0.03
MKS1-203ENST00000393120 SMC6Q96SB8 1091 aa14.86□□□□□ -0.03
MKS1-203ENST00000393120 ELAC2Q9BQ52 826 aaKnown RBP14.86□□□□□ -0.03
MKS1-203ENST00000393120 ST3GAL5Q9UNP4 418 aa14.86□□□□□ -0.03
MKS1-203ENST00000393120 AP4E1Q9UPM8 1137 aa14.86□□□□□ -0.03
MKS1-203ENST00000393120 HEY1Q9Y5J3 304 aa14.86□□□□□ -0.03
MKS1-203ENST00000393120 MYADML2A6NDP7 307 aa14.85□□□□□ -0.03
MKS1-203ENST00000393120 ASMTLO95671 621 aa14.85□□□□□ -0.03
MKS1-203ENST00000393120 CYBAP13498 195 aa14.85□□□□□ -0.03
MKS1-203ENST00000393120 NPR3P17342 541 aa14.85□□□□□ -0.03
MKS1-203ENST00000393120 KRT15P19012 456 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms