RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 ATRNO75882 1429 aa17.56■□□□□ 0.4
TRAF3IP1-202ENST00000391993 ESRRBO95718 433 aa17.56■□□□□ 0.4
TRAF3IP1-202ENST00000391993 HOXD13P35453 343 aa17.56■□□□□ 0.4
TRAF3IP1-202ENST00000391993 LSM3P62310 102 aaKnown RBP17.56■□□□□ 0.4
TRAF3IP1-202ENST00000391993 TAF5Q15542 800 aa17.56■□□□□ 0.4
TRAF3IP1-202ENST00000391993 OGFOD2Q6N063 350 aa17.56■□□□□ 0.4
TRAF3IP1-202ENST00000391993 FBXW8Q8N3Y1 598 aa17.56■□□□□ 0.4
TRAF3IP1-202ENST00000391993 KYQ8NBH2 561 aa17.56■□□□□ 0.4
TRAF3IP1-202ENST00000391993 FAM149B1Q96BN6 582 aa17.56■□□□□ 0.4
TRAF3IP1-202ENST00000391993 MTG1Q9BT17 334 aaPredicted RBP17.56■□□□□ 0.4
TRAF3IP1-202ENST00000391993 POLR1BQ9H9Y6 1135 aa17.56■□□□□ 0.4
TRAF3IP1-202ENST00000391993 THAP1Q9NVV9 213 aa17.56■□□□□ 0.4
TRAF3IP1-202ENST00000391993 UTP6Q9NYH9 597 aaKnown RBP17.56■□□□□ 0.4
TRAF3IP1-202ENST00000391993 TMEM94Q12767 1356 aa17.55■□□□□ 0.4
TRAF3IP1-202ENST00000391993 A0A0B4J269 797 aa17.55■□□□□ 0.4
TRAF3IP1-202ENST00000391993 PSTPIP1O43586 416 aa17.55■□□□□ 0.4
TRAF3IP1-202ENST00000391993 NTSR2O95665 410 aa17.55■□□□□ 0.4
TRAF3IP1-202ENST00000391993 CRTAMO95727 393 aa17.55■□□□□ 0.4
TRAF3IP1-202ENST00000391993 NLRP11P59045 1033 aaKnown RBP17.55■□□□□ 0.4
TRAF3IP1-202ENST00000391993 NME3Q13232 169 aa17.55■□□□□ 0.4
TRAF3IP1-202ENST00000391993 SPIDRQ14159 915 aa17.55■□□□□ 0.4
TRAF3IP1-202ENST00000391993 C16orf89Q6UX73 402 aa17.55■□□□□ 0.4
TRAF3IP1-202ENST00000391993 TMC5Q6UXY8 1006 aa17.55■□□□□ 0.4
TRAF3IP1-202ENST00000391993 C7orf43Q8WVR3 580 aa17.55■□□□□ 0.4
TRAF3IP1-202ENST00000391993 GNGT2O14610 69 aa17.55■□□□□ 0.4
TRAF3IP1-202ENST00000391993 KRT7P08729 469 aa17.55■□□□□ 0.4
TRAF3IP1-202ENST00000391993 MRPS26Q9BYN8 205 aaKnown RBP17.55■□□□□ 0.4
TRAF3IP1-202ENST00000391993 TMEM8AQ9HCN3 771 aa17.55■□□□□ 0.4
TRAF3IP1-202ENST00000391993 UGT1A9O60656 530 aa17.55■□□□□ 0.4
TRAF3IP1-202ENST00000391993 CYP1A2P05177 515 aa17.55■□□□□ 0.4
TRAF3IP1-202ENST00000391993 EIF4BP23588 611 aaKnown RBP17.55■□□□□ 0.4
TRAF3IP1-202ENST00000391993 OTUD3Q5T2D3 398 aaPredicted RBP17.55■□□□□ 0.4
TRAF3IP1-202ENST00000391993 PDSS2Q86YH6 399 aa17.55■□□□□ 0.4
TRAF3IP1-202ENST00000391993 UNC45BQ8IWX7 931 aa17.55■□□□□ 0.4
TRAF3IP1-202ENST00000391993 ATP6V0A1Q93050 837 aa17.55■□□□□ 0.4
TRAF3IP1-202ENST00000391993 UGT1A7Q9HAW7 530 aa17.55■□□□□ 0.4
TRAF3IP1-202ENST00000391993 UGT1A10Q9HAW8 530 aa17.55■□□□□ 0.4
TRAF3IP1-202ENST00000391993 UGT1A8Q9HAW9 530 aa17.55■□□□□ 0.4
TRAF3IP1-202ENST00000391993 MAN1A2O60476 641 aa17.54■□□□□ 0.4
TRAF3IP1-202ENST00000391993 PPP1R11O60927 126 aaPredicted RBP17.54■□□□□ 0.4
TRAF3IP1-202ENST00000391993 ADRB2P07550 413 aa17.54■□□□□ 0.4
TRAF3IP1-202ENST00000391993 ABHD2P08910 425 aa17.54■□□□□ 0.4
TRAF3IP1-202ENST00000391993 FGFR1P11362 822 aa17.54■□□□□ 0.4
TRAF3IP1-202ENST00000391993 EPHA3P29320 983 aa17.54■□□□□ 0.4
TRAF3IP1-202ENST00000391993 NAT16Q8N8M0 369 aa17.54■□□□□ 0.4
TRAF3IP1-202ENST00000391993 SHKBP1Q8TBC3 707 aa17.54■□□□□ 0.4
TRAF3IP1-202ENST00000391993 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.54■□□□□ 0.4
TRAF3IP1-202ENST00000391993 F7P08709 466 aaPredicted RBP17.54■□□□□ 0.4
TRAF3IP1-202ENST00000391993 GK3PQ14409 553 aa17.54■□□□□ 0.4
TRAF3IP1-202ENST00000391993 NRDE2Q9H7Z3 1164 aa17.54■□□□□ 0.4
TRAF3IP1-202ENST00000391993 TCF7L2Q9NQB0 619 aa17.54■□□□□ 0.4
TRAF3IP1-202ENST00000391993 DDX56Q9NY93 547 aaKnown RBP17.54■□□□□ 0.4
TRAF3IP1-202ENST00000391993 RABGEF1Q9UJ41 708 aa17.54■□□□□ 0.4
TRAF3IP1-202ENST00000391993 SYCE1LA8MT33 242 aa17.54■□□□□ 0.4
TRAF3IP1-202ENST00000391993 PARNO95453 639 aaKnown RBP17.54■□□□□ 0.4
TRAF3IP1-202ENST00000391993 CALB1P05937 261 aa17.54■□□□□ 0.4
TRAF3IP1-202ENST00000391993 RGS7P49802 495 aa17.54■□□□□ 0.4
TRAF3IP1-202ENST00000391993 STX1BP61266 288 aa17.54■□□□□ 0.4
TRAF3IP1-202ENST00000391993 TLR1Q15399 786 aa17.54■□□□□ 0.4
TRAF3IP1-202ENST00000391993 MSS51Q4VC12 460 aa17.54■□□□□ 0.4
TRAF3IP1-202ENST00000391993 MTX3Q5HYI7 312 aa17.54■□□□□ 0.4
TRAF3IP1-202ENST00000391993 ZNF618Q5T7W0 954 aa17.54■□□□□ 0.4
TRAF3IP1-202ENST00000391993 TMEM214Q6NUQ4 689 aaKnown RBP17.54■□□□□ 0.4
TRAF3IP1-202ENST00000391993 CDR2LQ86X02 465 aaPredicted RBP17.54■□□□□ 0.4
TRAF3IP1-202ENST00000391993 FAM71AQ8IYT1 594 aa17.54■□□□□ 0.4
TRAF3IP1-202ENST00000391993 SNX31Q8N9S9 440 aa17.54■□□□□ 0.4
TRAF3IP1-202ENST00000391993 RCN3Q96D15 328 aa17.54■□□□□ 0.4
TRAF3IP1-202ENST00000391993 GPATCH1Q9BRR8 931 aaKnown RBP17.54■□□□□ 0.4
TRAF3IP1-202ENST00000391993 GCOM2Q9BZD3 368 aaPredicted RBP17.54■□□□□ 0.4
TRAF3IP1-202ENST00000391993 PPCSQ9HAB8 311 aa17.54■□□□□ 0.4
TRAF3IP1-202ENST00000391993 MRGBPQ9NV56 204 aa17.54■□□□□ 0.4
TRAF3IP1-202ENST00000391993 CFAP99D6REC4 459 aa17.53■□□□□ 0.4
TRAF3IP1-202ENST00000391993 HSPA8P11142 646 aaKnown RBP17.53■□□□□ 0.4
TRAF3IP1-202ENST00000391993 KRT72Q14CN4 511 aa17.53■□□□□ 0.4
TRAF3IP1-202ENST00000391993 TMEM53Q6P2H8 277 aa17.53■□□□□ 0.4
TRAF3IP1-202ENST00000391993 TMC7Q7Z402 723 aa17.53■□□□□ 0.4
TRAF3IP1-202ENST00000391993 TASP1Q9H6P5 420 aa17.53■□□□□ 0.4
TRAF3IP1-202ENST00000391993 TIMMDC1Q9NPL8 285 aa17.53■□□□□ 0.4
TRAF3IP1-202ENST00000391993 RBAKQ9NYW8 714 aaPredicted RBP17.53■□□□□ 0.4
TRAF3IP1-202ENST00000391993 CNTNAP2Q9UHC6 1331 aa17.53■□□□□ 0.4
TRAF3IP1-202ENST00000391993 LAMA4Q16363 1823 aa17.53■□□□□ 0.4
TRAF3IP1-202ENST00000391993 TCRBV7S3A2A0A539 114 aa17.53■□□□□ 0.4
TRAF3IP1-202ENST00000391993 GOLGA8TH3BQL2 631 aa17.53■□□□□ 0.4
TRAF3IP1-202ENST00000391993 K7ERI5 159 aa17.53■□□□□ 0.4
TRAF3IP1-202ENST00000391993 BCL10O95999 233 aa17.53■□□□□ 0.4
TRAF3IP1-202ENST00000391993 FDX1P10109 184 aa17.53■□□□□ 0.4
TRAF3IP1-202ENST00000391993 COX4I1P13073 169 aa17.53■□□□□ 0.4
TRAF3IP1-202ENST00000391993 QARSP47897 775 aaKnown RBP17.53■□□□□ 0.4
TRAF3IP1-202ENST00000391993 PLIN5Q00G26 463 aa17.53■□□□□ 0.4
TRAF3IP1-202ENST00000391993 GNA12Q03113 381 aa17.53■□□□□ 0.4
TRAF3IP1-202ENST00000391993 HELQQ8TDG4 1101 aa17.53■□□□□ 0.4
TRAF3IP1-202ENST00000391993 TMIGD2Q96BF3 282 aa17.53■□□□□ 0.4
TRAF3IP1-202ENST00000391993 DGCR6LQ9BY27 220 aa17.53■□□□□ 0.4
TRAF3IP1-202ENST00000391993 PCDHA2Q9Y5H9 948 aa17.53■□□□□ 0.4
TRAF3IP1-202ENST00000391993 TCP10L2B9ZVM9 353 aa17.53■□□□□ 0.4
TRAF3IP1-202ENST00000391993 SERPINA6P08185 405 aa17.53■□□□□ 0.4
TRAF3IP1-202ENST00000391993 AVPR1AP37288 418 aa17.53■□□□□ 0.4
TRAF3IP1-202ENST00000391993 GDF10P55107 478 aa17.53■□□□□ 0.4
TRAF3IP1-202ENST00000391993 KDELC2Q7Z4H8 507 aa17.53■□□□□ 0.4
TRAF3IP1-202ENST00000391993 ALLCQ8N6M5 410 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms