RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 PDE6CP51160 858 aa9.73□□□□□ -0.85
HMGN1-202ENST00000380747 BCAT1P54687 386 aa9.73□□□□□ -0.85
HMGN1-202ENST00000380747 PDE4CQ08493 712 aa9.73□□□□□ -0.85
HMGN1-202ENST00000380747 BST2Q10589 180 aaKnown RBP9.73□□□□□ -0.85
HMGN1-202ENST00000380747 NCAPHQ15003 741 aa9.73□□□□□ -0.85
HMGN1-202ENST00000380747 SKOR2Q2VWA4 1001 aaPredicted RBP9.73□□□□□ -0.85
HMGN1-202ENST00000380747 ARHGAP29Q52LW3 1261 aa9.73□□□□□ -0.85
HMGN1-202ENST00000380747 SLC44A4Q53GD3 710 aa9.73□□□□□ -0.85
HMGN1-202ENST00000380747 FKBP15Q5T1M5 1219 aa9.73□□□□□ -0.85
HMGN1-202ENST00000380747 HECTD3Q5T447 861 aa9.73□□□□□ -0.85
HMGN1-202ENST00000380747 CC2D1AQ6P1N0 951 aaPredicted RBP9.73□□□□□ -0.85
HMGN1-202ENST00000380747 LCLAT1Q6UWP7 414 aa9.73□□□□□ -0.85
HMGN1-202ENST00000380747 LYPD8Q6UX82 237 aa9.73□□□□□ -0.85
HMGN1-202ENST00000380747 PIGZQ86VD9 579 aa9.73□□□□□ -0.85
HMGN1-202ENST00000380747 OVCA2Q8WZ82 227 aa9.73□□□□□ -0.85
HMGN1-202ENST00000380747 IRF7Q92985 503 aa9.73□□□□□ -0.85
HMGN1-202ENST00000380747 ZFYVE19Q96K21 471 aa9.73□□□□□ -0.85
HMGN1-202ENST00000380747 LRRC3BQ96PB8 259 aa9.73□□□□□ -0.85
HMGN1-202ENST00000380747 SLC22A12Q96S37 553 aa9.73□□□□□ -0.85
HMGN1-202ENST00000380747 NACA2Q9H009 215 aa9.73□□□□□ -0.85
HMGN1-202ENST00000380747 KIF9Q9HAQ2 790 aa9.73□□□□□ -0.85
HMGN1-202ENST00000380747 PNPLA8Q9NP80 782 aa9.73□□□□□ -0.85
HMGN1-202ENST00000380747 SIX2Q9NPC8 291 aa9.73□□□□□ -0.85
HMGN1-202ENST00000380747 ARHGEF3Q9NR81 526 aa9.73□□□□□ -0.85
HMGN1-202ENST00000380747 IL37Q9NZH6 218 aa9.73□□□□□ -0.85
HMGN1-202ENST00000380747 DLGAP2Q9P1A6 1054 aa9.73□□□□□ -0.85
HMGN1-202ENST00000380747 LIMA1Q9UHB6 759 aaKnown RBP9.73□□□□□ -0.85
HMGN1-202ENST00000380747 AJAP1Q9UKB5 411 aaPredicted RBP9.73□□□□□ -0.85
HMGN1-202ENST00000380747 CCL26Q9Y258 94 aa9.73□□□□□ -0.85
HMGN1-202ENST00000380747 M0QYV0 167 aa9.72□□□□□ -0.85
HMGN1-202ENST00000380747 TULP2O00295 520 aa9.72□□□□□ -0.85
HMGN1-202ENST00000380747 XPO1O14980 1071 aaKnown RBP9.72□□□□□ -0.85
HMGN1-202ENST00000380747 CHADO15335 359 aa9.72□□□□□ -0.85
HMGN1-202ENST00000380747 THAP12O43422 761 aa9.72□□□□□ -0.85
HMGN1-202ENST00000380747 OAS1P00973 400 aaKnown RBP9.72□□□□□ -0.85
HMGN1-202ENST00000380747 MBL2P11226 248 aaPredicted RBP9.72□□□□□ -0.85
HMGN1-202ENST00000380747 PFKLP17858 780 aa9.72□□□□□ -0.85
HMGN1-202ENST00000380747 GNA15P30679 374 aa9.72□□□□□ -0.85
HMGN1-202ENST00000380747 ZNF165P49910 485 aa9.72□□□□□ -0.85
HMGN1-202ENST00000380747 KPNA1P52294 538 aaPredicted RBP9.72□□□□□ -0.85
HMGN1-202ENST00000380747 KIF11P52732 1056 aa9.72□□□□□ -0.85
HMGN1-202ENST00000380747 ZNF132P52740 706 aa9.72□□□□□ -0.85
HMGN1-202ENST00000380747 COPB1P53618 953 aaKnown RBP9.72□□□□□ -0.85
HMGN1-202ENST00000380747 FCHO2Q0JRZ9 810 aa9.72□□□□□ -0.85
HMGN1-202ENST00000380747 KCNMA1Q12791 1236 aa9.72□□□□□ -0.85
HMGN1-202ENST00000380747 RAPGEF1Q13905 1077 aa9.72□□□□□ -0.85
HMGN1-202ENST00000380747 ZNF268Q14587 947 aaPredicted RBP9.72□□□□□ -0.85
HMGN1-202ENST00000380747 NR6A1Q15406 480 aa9.72□□□□□ -0.85
HMGN1-202ENST00000380747 STILQ15468 1287 aa9.72□□□□□ -0.85
HMGN1-202ENST00000380747 MLF2Q15773 248 aaPredicted RBP9.72□□□□□ -0.85
HMGN1-202ENST00000380747 CNGA2Q16280 664 aa9.72□□□□□ -0.85
HMGN1-202ENST00000380747 KIAA2013Q8IYS2 634 aa9.72□□□□□ -0.85
HMGN1-202ENST00000380747 TTC8Q8TAM2 541 aa9.72□□□□□ -0.85
HMGN1-202ENST00000380747 CSGALNACT1Q8TDX6 532 aa9.72□□□□□ -0.85
HMGN1-202ENST00000380747 SH3RF2Q8TEC5 729 aa9.72□□□□□ -0.85
HMGN1-202ENST00000380747 DNASE1L2Q92874 299 aa9.72□□□□□ -0.85
HMGN1-202ENST00000380747 SECISBP2LQ93073 1101 aaKnown RBP9.72□□□□□ -0.85
HMGN1-202ENST00000380747 SPSB2Q99619 263 aa9.72□□□□□ -0.85
HMGN1-202ENST00000380747 BPIFA3Q9BQP9 254 aa9.72□□□□□ -0.85
HMGN1-202ENST00000380747 FUCA2Q9BTY2 467 aa9.72□□□□□ -0.85
HMGN1-202ENST00000380747 UBXN6Q9BZV1 441 aa9.72□□□□□ -0.85
HMGN1-202ENST00000380747 RNF38Q9H0F5 515 aa9.72□□□□□ -0.85
HMGN1-202ENST00000380747 CCSER2Q9H7U1 834 aa9.72□□□□□ -0.85
HMGN1-202ENST00000380747 TBC1D17Q9HA65 648 aa9.72□□□□□ -0.85
HMGN1-202ENST00000380747 LRRC4Q9HBW1 653 aa9.72□□□□□ -0.85
HMGN1-202ENST00000380747 TLR8Q9NR97 1041 aaKnown RBP9.72□□□□□ -0.85
HMGN1-202ENST00000380747 GKN1Q9NS71 199 aa9.72□□□□□ -0.85
HMGN1-202ENST00000380747 SMPD4Q9NXE4 827 aa9.72□□□□□ -0.85
HMGN1-202ENST00000380747 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.72□□□□□ -0.85
HMGN1-202ENST00000380747 CNTN6Q9UQ52 1028 aa9.72□□□□□ -0.85
HMGN1-202ENST00000380747 SCML2Q9UQR0 700 aa9.72□□□□□ -0.85
HMGN1-202ENST00000380747 CPQQ9Y646 472 aa9.72□□□□□ -0.85
HMGN1-202ENST00000380747 R4GN57 208 aa9.72□□□□□ -0.85
HMGN1-202ENST00000380747 PTPRDP23468 1912 aa9.72□□□□□ -0.85
HMGN1-202ENST00000380747 FANCMQ8IYD8 2048 aa9.72□□□□□ -0.85
HMGN1-202ENST00000380747 USP24Q9UPU5 2620 aa9.71□□□□□ -0.85
HMGN1-202ENST00000380747 A0A1W2PQH9 124 aa9.71□□□□□ -0.86
HMGN1-202ENST00000380747 FAM92AA1XBS5 289 aa9.71□□□□□ -0.86
HMGN1-202ENST00000380747 BECN2A8MW95 431 aa9.71□□□□□ -0.86
HMGN1-202ENST00000380747 FOXN3O00409 490 aaPredicted RBP9.71□□□□□ -0.86
HMGN1-202ENST00000380747 COCHO43405 550 aa9.71□□□□□ -0.86
HMGN1-202ENST00000380747 MED7O43513 233 aa9.71□□□□□ -0.86
HMGN1-202ENST00000380747 TLR5O60602 858 aa9.71□□□□□ -0.86
HMGN1-202ENST00000380747 ZDHHC11BP0C7U3 371 aa9.71□□□□□ -0.86
HMGN1-202ENST00000380747 PNMA6AP0CW24 399 aaPredicted RBP9.71□□□□□ -0.86
HMGN1-202ENST00000380747 SETSIPP0DME0 302 aa9.71□□□□□ -0.86
HMGN1-202ENST00000380747 ZNF18P17022 549 aa9.71□□□□□ -0.86
HMGN1-202ENST00000380747 SDHBP21912 280 aa9.71□□□□□ -0.86
HMGN1-202ENST00000380747 IFNAR2P48551 515 aa9.71□□□□□ -0.86
HMGN1-202ENST00000380747 PGFP49763 221 aa9.71□□□□□ -0.86
HMGN1-202ENST00000380747 RGS7P49802 495 aa9.71□□□□□ -0.86
HMGN1-202ENST00000380747 KLK7P49862 253 aa9.71□□□□□ -0.86
HMGN1-202ENST00000380747 TKTL1P51854 596 aa9.71□□□□□ -0.86
HMGN1-202ENST00000380747 SLC7A9P82251 487 aa9.71□□□□□ -0.86
HMGN1-202ENST00000380747 PRKCQQ04759 706 aa9.71□□□□□ -0.86
HMGN1-202ENST00000380747 USP4Q13107 963 aa9.71□□□□□ -0.86
HMGN1-202ENST00000380747 MTF1Q14872 753 aa9.71□□□□□ -0.86
HMGN1-202ENST00000380747 KLHDC7AQ5VTJ3 777 aa9.71□□□□□ -0.86
HMGN1-202ENST00000380747 DENND1BQ6P3S1 775 aa9.71□□□□□ -0.86
HMGN1-202ENST00000380747 TPRG1Q6ZUI0 275 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms