RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 BCLAF3A2AJT9 711 aaKnown RBP13.13□□□□□ -0.31
VPS16-202ENST00000380445 FAM47DPA6NHR8 397 aa13.13□□□□□ -0.31
VPS16-202ENST00000380445 XPO1O14980 1071 aaKnown RBP13.13□□□□□ -0.31
VPS16-202ENST00000380445 SPTLC1O15269 473 aa13.13□□□□□ -0.31
VPS16-202ENST00000380445 CHADO15335 359 aa13.13□□□□□ -0.31
VPS16-202ENST00000380445 LCP1P13796 627 aa13.13□□□□□ -0.31
VPS16-202ENST00000380445 CREB1P16220 341 aa13.13□□□□□ -0.31
VPS16-202ENST00000380445 KRT15P19012 456 aa13.13□□□□□ -0.31
VPS16-202ENST00000380445 ELF1P32519 619 aa13.13□□□□□ -0.31
VPS16-202ENST00000380445 LRRC14Q15048 493 aa13.13□□□□□ -0.31
VPS16-202ENST00000380445 HP1BP3Q5SSJ5 553 aaPredicted RBP13.13□□□□□ -0.31
VPS16-202ENST00000380445 ANKRD22Q5VYY1 191 aa13.13□□□□□ -0.31
VPS16-202ENST00000380445 TRABD2AQ86V40 505 aa13.13□□□□□ -0.31
VPS16-202ENST00000380445 SLC2A14Q8TDB8 520 aa13.13□□□□□ -0.31
VPS16-202ENST00000380445 FAF2Q96CS3 445 aa13.13□□□□□ -0.31
VPS16-202ENST00000380445 RTP4Q96DX8 246 aa13.13□□□□□ -0.31
VPS16-202ENST00000380445 ACTR5Q9H9F9 607 aaPredicted RBP13.13□□□□□ -0.31
VPS16-202ENST00000380445 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.13□□□□□ -0.31
VPS16-202ENST00000380445 ZMYND8Q9ULU4 1186 aaPredicted RBP13.13□□□□□ -0.31
VPS16-202ENST00000380445 SMG5Q9UPR3 1016 aaKnown RBP13.13□□□□□ -0.31
VPS16-202ENST00000380445 H0YHG0 523 aa13.13□□□□□ -0.31
VPS16-202ENST00000380445 ZBED1O96006 694 aa13.13□□□□□ -0.31
VPS16-202ENST00000380445 RPLP2P05387 115 aaKnown RBP13.13□□□□□ -0.31
VPS16-202ENST00000380445 NR2C2P49116 596 aa13.13□□□□□ -0.31
VPS16-202ENST00000380445 IL9RQ01113 521 aa13.13□□□□□ -0.31
VPS16-202ENST00000380445 DPYSL2Q16555 572 aa13.13□□□□□ -0.31
VPS16-202ENST00000380445 RAB6CQ53S08 254 aa13.13□□□□□ -0.31
VPS16-202ENST00000380445 ZC3H12AQ5D1E8 599 aaKnown RBP13.13□□□□□ -0.31
VPS16-202ENST00000380445 EFHC2Q5JST6 749 aa13.13□□□□□ -0.31
VPS16-202ENST00000380445 C3orf62Q6ZUJ4 267 aa13.13□□□□□ -0.31
VPS16-202ENST00000380445 STRADAQ7RTN6 431 aa13.13□□□□□ -0.31
VPS16-202ENST00000380445 ANKMY2Q8IV38 441 aa13.13□□□□□ -0.31
VPS16-202ENST00000380445 B3GALNT2Q8NCR0 500 aa13.13□□□□□ -0.31
VPS16-202ENST00000380445 SMC6Q96SB8 1091 aa13.13□□□□□ -0.31
VPS16-202ENST00000380445 HNRNPABQ99729 332 aaKnown RBP13.13□□□□□ -0.31
VPS16-202ENST00000380445 MTG1Q9BT17 334 aaPredicted RBP13.13□□□□□ -0.31
VPS16-202ENST00000380445 C11orf84Q9BUA3 381 aaPredicted RBP13.13□□□□□ -0.31
VPS16-202ENST00000380445 RAB6CQ9H0N0 254 aa13.13□□□□□ -0.31
VPS16-202ENST00000380445 PRDM16Q9HAZ2 1276 aa13.13□□□□□ -0.31
VPS16-202ENST00000380445 RNF19AQ9NV58 838 aa13.13□□□□□ -0.31
VPS16-202ENST00000380445 HEY1Q9Y5J3 304 aa13.13□□□□□ -0.31
VPS16-202ENST00000380445 GABBR2O75899 941 aa13.12□□□□□ -0.31
VPS16-202ENST00000380445 NEBLO76041 1014 aa13.12□□□□□ -0.31
VPS16-202ENST00000380445 IGHA2P01877 340 aa13.12□□□□□ -0.31
VPS16-202ENST00000380445 GCAP28676 217 aa13.12□□□□□ -0.31
VPS16-202ENST00000380445 SOX4Q06945 474 aaPredicted RBP13.12□□□□□ -0.31
VPS16-202ENST00000380445 XRCC4Q13426 336 aa13.12□□□□□ -0.31
VPS16-202ENST00000380445 PPP6R3Q5H9R7 873 aaPredicted RBP13.12□□□□□ -0.31
VPS16-202ENST00000380445 FNBP1LQ5T0N5 605 aa13.12□□□□□ -0.31
VPS16-202ENST00000380445 FAM228AQ86W67 206 aa13.12□□□□□ -0.31
VPS16-202ENST00000380445 PQLC3Q8N755 202 aa13.12□□□□□ -0.31
VPS16-202ENST00000380445 FBXO36Q8NEA4 188 aa13.12□□□□□ -0.31
VPS16-202ENST00000380445 PCDH19Q8TAB3 1148 aa13.12□□□□□ -0.31
VPS16-202ENST00000380445 MAGEB18Q96M61 343 aa13.12□□□□□ -0.31
VPS16-202ENST00000380445 CAPN7Q9Y6W3 813 aa13.12□□□□□ -0.31
VPS16-202ENST00000380445 KCNN4O15554 427 aa13.12□□□□□ -0.31
VPS16-202ENST00000380445 PRPF4O43172 522 aaKnown RBP eCLIP13.12□□□□□ -0.316e-8■■■□□ 15.4
VPS16-202ENST00000380445 SPAG6O75602 509 aa13.12□□□□□ -0.31
VPS16-202ENST00000380445 C6orf222P0C671 652 aaPredicted RBP13.12□□□□□ -0.31
VPS16-202ENST00000380445 GBP2P32456 591 aaPredicted RBP13.12□□□□□ -0.31
VPS16-202ENST00000380445 MRPS6P82932 125 aaKnown RBP13.12□□□□□ -0.31
VPS16-202ENST00000380445 CBLBQ13191 982 aa13.12□□□□□ -0.31
VPS16-202ENST00000380445 BBS9Q3SYG4 887 aa13.12□□□□□ -0.31
VPS16-202ENST00000380445 RGMBQ6NW40 437 aa13.12□□□□□ -0.31
VPS16-202ENST00000380445 CAPN12Q6ZSI9 719 aa13.12□□□□□ -0.31
VPS16-202ENST00000380445 CDKL3Q8IVW4 592 aaPredicted RBP13.12□□□□□ -0.31
VPS16-202ENST00000380445 LPIN3Q9BQK8 851 aa13.12□□□□□ -0.31
VPS16-202ENST00000380445 DUSP16Q9BY84 665 aa13.12□□□□□ -0.31
VPS16-202ENST00000380445 KLC2Q9H0B6 622 aa13.12□□□□□ -0.31
VPS16-202ENST00000380445 KDM4CQ9H3R0 1056 aa13.12□□□□□ -0.31
VPS16-202ENST00000380445 TRABDQ9H4I3 376 aa13.12□□□□□ -0.31
VPS16-202ENST00000380445 NRDE2Q9H7Z3 1164 aa13.12□□□□□ -0.31
VPS16-202ENST00000380445 USP29Q9HBJ7 922 aa13.12□□□□□ -0.31
VPS16-202ENST00000380445 SPC25Q9HBM1 224 aa13.12□□□□□ -0.31
VPS16-202ENST00000380445 GOLGA2P5Q9HBQ8 144 aa13.12□□□□□ -0.31
VPS16-202ENST00000380445 CHST12Q9NRB3 414 aa13.12□□□□□ -0.31
VPS16-202ENST00000380445 GPATCH2LQ9NWQ4 482 aa13.12□□□□□ -0.31
VPS16-202ENST00000380445 RABGEF1Q9UJ41 708 aa13.12□□□□□ -0.31
VPS16-202ENST00000380445 TRPV2Q9Y5S1 764 aa13.12□□□□□ -0.31
VPS16-202ENST00000380445 CYB561D2O14569 222 aa13.11□□□□□ -0.31
VPS16-202ENST00000380445 TMEM63AO94886 807 aa13.11□□□□□ -0.31
VPS16-202ENST00000380445 CYP2F1P24903 491 aa13.11□□□□□ -0.31
VPS16-202ENST00000380445 MATKP42679 507 aa13.11□□□□□ -0.31
VPS16-202ENST00000380445 GPX6P59796 221 aa13.11□□□□□ -0.31
VPS16-202ENST00000380445 BZW1Q7L1Q6 419 aaKnown RBP13.11□□□□□ -0.31
VPS16-202ENST00000380445 PSTKQ8IV42 348 aaKnown RBP13.11□□□□□ -0.31
VPS16-202ENST00000380445 PPP1R10Q96QC0 940 aaKnown RBP13.11□□□□□ -0.31
VPS16-202ENST00000380445 ELAC2Q9BQ52 826 aaKnown RBP13.11□□□□□ -0.31
VPS16-202ENST00000380445 DHX35Q9H5Z1 703 aaKnown RBP13.11□□□□□ -0.31
VPS16-202ENST00000380445 ACSS3Q9H6R3 686 aa13.11□□□□□ -0.31
VPS16-202ENST00000380445 AP4E1Q9UPM8 1137 aa13.11□□□□□ -0.31
VPS16-202ENST00000380445 TRIP12Q14669 1992 aaPredicted RBP13.11□□□□□ -0.31
VPS16-202ENST00000380445 CLUHO75153 1309 aa13.11□□□□□ -0.31
VPS16-202ENST00000380445 TCP11X1B4DZS4 312 aa13.11□□□□□ -0.31
VPS16-202ENST00000380445 HCRTO43612 131 aa13.11□□□□□ -0.31
VPS16-202ENST00000380445 L1CAMP32004 1257 aa13.11□□□□□ -0.31
VPS16-202ENST00000380445 ACTN3Q08043 901 aaPredicted RBP13.11□□□□□ -0.31
VPS16-202ENST00000380445 GNASQ5JWF2 1037 aa13.11□□□□□ -0.31
VPS16-202ENST00000380445 ZNF618Q5T7W0 954 aa13.11□□□□□ -0.31
VPS16-202ENST00000380445 NUGGCQ68CJ6 796 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms