RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 HIST3H2AQ7L7L0 130 aa12.79□□□□□ -0.36
CHD3-203ENST00000380358 PROM2Q8N271 834 aa12.79□□□□□ -0.36
CHD3-203ENST00000380358 MDM1Q8TC05 714 aa12.79□□□□□ -0.36
CHD3-203ENST00000380358 ADAM32Q8TC27 787 aa12.79□□□□□ -0.36
CHD3-203ENST00000380358 HIST1H2ACQ93077 130 aa12.79□□□□□ -0.36
CHD3-203ENST00000380358 THG1LQ9NWX6 298 aaKnown RBP12.79□□□□□ -0.36
CHD3-203ENST00000380358 DUOX2Q9NRD8 1548 aa12.79□□□□□ -0.36
CHD3-203ENST00000380358 UGGT2Q9NYU1 1516 aa12.79□□□□□ -0.36
CHD3-203ENST00000380358 ZCCHC18P0CG32 403 aa12.79□□□□□ -0.36
CHD3-203ENST00000380358 NR6A1Q15406 480 aa12.79□□□□□ -0.36
CHD3-203ENST00000380358 ATAD3BQ5T9A4 648 aa12.79□□□□□ -0.36
CHD3-203ENST00000380358 ESRP1Q6NXG1 681 aaKnown RBP12.79□□□□□ -0.36
CHD3-203ENST00000380358 TRAPPC5Q8IUR0 188 aa12.79□□□□□ -0.36
CHD3-203ENST00000380358 PDGFDQ9GZP0 370 aaPredicted RBP12.79□□□□□ -0.36
CHD3-203ENST00000380358 UBAP1Q9NZ09 502 aa12.79□□□□□ -0.36
CHD3-203ENST00000380358 GOLGA8TH3BQL2 631 aa12.79□□□□□ -0.36
CHD3-203ENST00000380358 ZNF862O60290 1169 aa12.79□□□□□ -0.36
CHD3-203ENST00000380358 POU6F1Q14863 301 aa12.79□□□□□ -0.36
CHD3-203ENST00000380358 CCDC144BQ3MJ40 725 aa12.79□□□□□ -0.36
CHD3-203ENST00000380358 ULK2Q8IYT8 1036 aa12.79□□□□□ -0.36
CHD3-203ENST00000380358 TP53INP1Q96A56 240 aa12.79□□□□□ -0.36
CHD3-203ENST00000380358 XPO6Q96QU8 1125 aaKnown RBP12.79□□□□□ -0.36
CHD3-203ENST00000380358 KIF2CQ99661 725 aa12.79□□□□□ -0.36
CHD3-203ENST00000380358 SLC4A5Q9BY07 1137 aa12.79□□□□□ -0.36
CHD3-203ENST00000380358 MTMR12Q9C0I1 747 aa12.79□□□□□ -0.36
CHD3-203ENST00000380358 MANSC1Q9H8J5 431 aa12.79□□□□□ -0.36
CHD3-203ENST00000380358 KLC4Q9NSK0 619 aa12.79□□□□□ -0.36
CHD3-203ENST00000380358 APEX2Q9UBZ4 518 aa12.79□□□□□ -0.36
CHD3-203ENST00000380358 WDR62O43379 1518 aa12.79□□□□□ -0.36
CHD3-203ENST00000380358 AKT2P31751 481 aa12.79□□□□□ -0.36
CHD3-203ENST00000380358 RABL6Q3YEC7 729 aaPredicted RBP12.79□□□□□ -0.36
CHD3-203ENST00000380358 AGAP9Q5VTM2 703 aa12.79□□□□□ -0.36
CHD3-203ENST00000380358 ZNF544Q6NX49 715 aa12.79□□□□□ -0.36
CHD3-203ENST00000380358 TRPM5Q9NZQ8 1165 aa12.79□□□□□ -0.36
CHD3-203ENST00000380358 KLHL41O60662 606 aa12.79□□□□□ -0.36
CHD3-203ENST00000380358 CETPP11597 493 aa12.79□□□□□ -0.36
CHD3-203ENST00000380358 ITGADQ13349 1161 aa12.79□□□□□ -0.36
CHD3-203ENST00000380358 TMC5Q6UXY8 1006 aa12.79□□□□□ -0.36
CHD3-203ENST00000380358 CMTM5Q96DZ9 223 aa12.79□□□□□ -0.36
CHD3-203ENST00000380358 MAT2BQ9NZL9 334 aa12.79□□□□□ -0.36
CHD3-203ENST00000380358 PAICSP22234 425 aaKnown RBP12.79□□□□□ -0.36
CHD3-203ENST00000380358 BTG3Q14201 252 aaPredicted RBP12.79□□□□□ -0.36
CHD3-203ENST00000380358 SMU1Q2TAY7 513 aa12.79□□□□□ -0.36
CHD3-203ENST00000380358 TRIQKQ629K1 86 aa12.79□□□□□ -0.36
CHD3-203ENST00000380358 PLEKHA7Q6IQ23 1121 aa12.79□□□□□ -0.36
CHD3-203ENST00000380358 LY9Q9HBG7 655 aa12.79□□□□□ -0.36
CHD3-203ENST00000380358 TRIM17Q9Y577 477 aa12.79□□□□□ -0.36
CHD3-203ENST00000380358 SH3D21A4FU49 640 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 SAC3D1A6NKF1 404 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 KRT16P08779 473 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 ERCC2P18074 760 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 TGM3Q08188 693 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 STAT4Q14765 748 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 CHP1Q99653 195 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 PDCD10Q9BUL8 212 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 GRIP2Q9C0E4 1043 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 GPN3Q9UHW5 284 aaPredicted RBP12.78□□□□□ -0.36
CHD3-203ENST00000380358 ZNF518AQ6AHZ1 1483 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 COL15A1P39059 1388 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 TRDMT1O14717 391 aaKnown RBP12.78□□□□□ -0.36
CHD3-203ENST00000380358 THOP1P52888 689 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 GALCP54803 685 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 INSCQ1MX18 579 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 XKR3Q5GH77 459 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.78□□□□□ -0.36
CHD3-203ENST00000380358 ELMO1Q92556 727 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 KCNB2Q92953 911 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 C19orf60Q96EN9 201 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 ZNF354BQ96LW1 612 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 PPP1R10Q96QC0 940 aaKnown RBP12.78□□□□□ -0.36
CHD3-203ENST00000380358 CCSER1Q9C0I3 900 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 UVRAGQ9P2Y5 699 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 DCDC2Q9UHG0 476 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 ATG7O95352 703 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 DHX34Q14147 1143 aaKnown RBP12.78□□□□□ -0.36
CHD3-203ENST00000380358 PRUNE1Q86TP1 453 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 CYP4Z2PQ8N1L4 340 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 KLHL23Q8NBE8 558 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 E2F7Q96AV8 911 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 CATSPER2Q96P56 530 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 MAGEA4P43358 317 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 CASP4P49662 377 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 DNAJC3Q13217 504 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 LAMB3Q13751 1172 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 GRM4Q14833 912 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 ENOSF1Q7L5Y1 443 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 ADGRF2Q8IZF7 708 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 KCTD14Q9BQ13 255 aaPredicted RBP12.78□□□□□ -0.36
CHD3-203ENST00000380358 MYOM2P54296 1465 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 CHRNB3Q05901 458 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 EFHC1Q5JVL4 640 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 CDH24Q86UP0 819 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 HERC6Q8IVU3 1022 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 TTC39CQ8N584 583 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 POP1Q99575 1024 aaKnown RBP12.78□□□□□ -0.36
CHD3-203ENST00000380358 SCAMP1O15126 338 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 RGL2O15211 777 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 GRIN3BO60391 1043 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 ALDH2P05091 517 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 MADCAM1Q13477 382 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms