RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 ERICH1Q86X53 443 aa19.65■□□□□ 0.74
SSU72-203ENST00000378725 KIAA1958Q8N8K9 716 aa19.65■□□□□ 0.74
SSU72-203ENST00000378725 DEPDC1BQ8WUY9 529 aa19.65■□□□□ 0.74
SSU72-203ENST00000378725 C18orf8Q96DM3 657 aa19.65■□□□□ 0.74
SSU72-203ENST00000378725 ZFRQ96KR1 1074 aaKnown RBP19.65■□□□□ 0.74
SSU72-203ENST00000378725 MUTYHQ9UIF7 546 aa19.65■□□□□ 0.74
SSU72-203ENST00000378725 DNMT3LQ9UJW3 386 aa19.65■□□□□ 0.74
SSU72-203ENST00000378725 LTFP02788 710 aa19.64■□□□□ 0.73
SSU72-203ENST00000378725 FYNP06241 537 aa19.64■□□□□ 0.73
SSU72-203ENST00000378725 MBL2P11226 248 aaPredicted RBP19.64■□□□□ 0.73
SSU72-203ENST00000378725 SKILP12757 684 aa19.64■□□□□ 0.73
SSU72-203ENST00000378725 TNFAIP3P21580 790 aa19.64■□□□□ 0.73
SSU72-203ENST00000378725 CENPCQ03188 943 aa19.64■□□□□ 0.73
SSU72-203ENST00000378725 BTBD8Q5XKL5 378 aa19.64■□□□□ 0.73
SSU72-203ENST00000378725 ZDHHC17Q8IUH5 632 aa19.64■□□□□ 0.73
SSU72-203ENST00000378725 DRC7Q8IY82 874 aa19.64■□□□□ 0.73
SSU72-203ENST00000378725 OR8K1Q8NGG5 319 aa19.64■□□□□ 0.73
SSU72-203ENST00000378725 RIN3Q8TB24 985 aa19.64■□□□□ 0.73
SSU72-203ENST00000378725 BPIFB1Q8TDL5 484 aa19.64■□□□□ 0.73
SSU72-203ENST00000378725 IPO4Q8TEX9 1081 aaKnown RBP19.64■□□□□ 0.73
SSU72-203ENST00000378725 KHSRPQ92945 711 aaKnown RBP eCLIP19.64■□□□□ 0.73
SSU72-203ENST00000378725 DNAJC7Q99615 494 aa19.64■□□□□ 0.73
SSU72-203ENST00000378725 TRMT61BQ9BVS5 477 aaKnown RBP19.64■□□□□ 0.73
SSU72-203ENST00000378725 KLF16Q9BXK1 252 aaPredicted RBP19.64■□□□□ 0.73
SSU72-203ENST00000378725 ASNSD1Q9NWL6 643 aa19.64■□□□□ 0.73
SSU72-203ENST00000378725 NUDT5Q9UKK9 219 aa19.64■□□□□ 0.73
SSU72-203ENST00000378725 DUSP12Q9UNI6 340 aa19.64■□□□□ 0.73
SSU72-203ENST00000378725 CPQQ9Y646 472 aa19.64■□□□□ 0.73
SSU72-203ENST00000378725 ANAPC1Q9H1A4 1944 aa19.64■□□□□ 0.73
SSU72-203ENST00000378725 LEFTY2O00292 366 aa19.63■□□□□ 0.73
SSU72-203ENST00000378725 SERPING1P05155 500 aa19.63■□□□□ 0.73
SSU72-203ENST00000378725 GLI1P08151 1106 aa19.63■□□□□ 0.73
SSU72-203ENST00000378725 SRFP11831 508 aa19.63■□□□□ 0.73
SSU72-203ENST00000378725 MMP8P22894 467 aa19.63■□□□□ 0.73
SSU72-203ENST00000378725 SLC6A3Q01959 620 aa19.63■□□□□ 0.73
SSU72-203ENST00000378725 USP4Q13107 963 aa19.63■□□□□ 0.73
SSU72-203ENST00000378725 ZNF77Q15935 545 aa19.63■□□□□ 0.73
SSU72-203ENST00000378725 C10orf120Q5SQS8 335 aa19.63■□□□□ 0.73
SSU72-203ENST00000378725 OLFML1Q6UWY5 402 aa19.63■□□□□ 0.73
SSU72-203ENST00000378725 FAM183BPQ6ZVS7 135 aa19.63■□□□□ 0.73
SSU72-203ENST00000378725 TMC6Q7Z403 805 aa19.63■□□□□ 0.73
SSU72-203ENST00000378725 PHF13Q86YI8 300 aaPredicted RBP19.63■□□□□ 0.73
SSU72-203ENST00000378725 UBALD2Q8IYN6 164 aa19.63■□□□□ 0.73
SSU72-203ENST00000378725 MSANTD4Q8NCY6 345 aa19.63■□□□□ 0.73
SSU72-203ENST00000378725 SLC30A5Q8TAD4 765 aa19.63■□□□□ 0.73
SSU72-203ENST00000378725 SH3RF2Q8TEC5 729 aa19.63■□□□□ 0.73
SSU72-203ENST00000378725 SLC2A4RGQ9NR83 387 aa19.63■□□□□ 0.73
SSU72-203ENST00000378725 OLA1Q9NTK5 396 aaKnown RBP19.63■□□□□ 0.73
SSU72-203ENST00000378725 TNFRSF10AO00220 468 aa19.62■□□□□ 0.73
SSU72-203ENST00000378725 TPM1P09493 284 aa19.62■□□□□ 0.73
SSU72-203ENST00000378725 SCNN1AP37088 669 aa19.62■□□□□ 0.73
SSU72-203ENST00000378725 YWHAZP63104 245 aaKnown RBP19.62■□□□□ 0.73
SSU72-203ENST00000378725 GPC5P78333 572 aa19.62■□□□□ 0.73
SSU72-203ENST00000378725 ZXDAP98168 799 aa19.62■□□□□ 0.73
SSU72-203ENST00000378725 PTP4A2Q12974 167 aa19.62■□□□□ 0.73
SSU72-203ENST00000378725 GRM2Q14416 872 aa19.62■□□□□ 0.73
SSU72-203ENST00000378725 EFHC1Q5JVL4 640 aa19.62■□□□□ 0.73
SSU72-203ENST00000378725 OR6B2Q6IFH4 312 aa19.62■□□□□ 0.73
SSU72-203ENST00000378725 ACAD10Q6JQN1 1059 aa19.62■□□□□ 0.73
SSU72-203ENST00000378725 MSANTD2Q6P1R3 559 aa19.62■□□□□ 0.73
SSU72-203ENST00000378725 DDX42Q86XP3 938 aaKnown RBP eCLIP19.62■□□□□ 0.73
SSU72-203ENST00000378725 XYLT1Q86Y38 959 aa19.62■□□□□ 0.73
SSU72-203ENST00000378725 EDEM1Q92611 657 aa19.62■□□□□ 0.73
SSU72-203ENST00000378725 GOLGA1Q92805 767 aa19.62■□□□□ 0.73
SSU72-203ENST00000378725 TRIM62Q9BVG3 475 aa19.62■□□□□ 0.73
SSU72-203ENST00000378725 NACA2Q9H009 215 aa19.62■□□□□ 0.73
SSU72-203ENST00000378725 SYNCQ9H7C4 482 aa19.62■□□□□ 0.73
SSU72-203ENST00000378725 GKN1Q9NS71 199 aa19.62■□□□□ 0.73
SSU72-203ENST00000378725 SMPD4Q9NXE4 827 aa19.62■□□□□ 0.73
SSU72-203ENST00000378725 NUP210Q8TEM1 1887 aaPredicted RBP19.61■□□□□ 0.73
SSU72-203ENST00000378725 PI4K2BG5E9Z4 385 aa19.61■□□□□ 0.73
SSU72-203ENST00000378725 DDX3XO00571 662 aaKnown RBP eCLIP19.61■□□□□ 0.731e-20■■■■□ 19.5
SSU72-203ENST00000378725 MDM4O15151 490 aa19.61■□□□□ 0.73
SSU72-203ENST00000378725 CHADO15335 359 aa19.61■□□□□ 0.73
SSU72-203ENST00000378725 DCXO43602 365 aa19.61■□□□□ 0.73
SSU72-203ENST00000378725 NARSO43776 548 aaKnown RBP19.61■□□□□ 0.73
SSU72-203ENST00000378725 MFAP3LO75121 409 aa19.61■□□□□ 0.73
SSU72-203ENST00000378725 GZMAP12544 262 aa19.61■□□□□ 0.73
SSU72-203ENST00000378725 NSFP46459 744 aaKnown RBP19.61■□□□□ 0.73
SSU72-203ENST00000378725 TAF5Q15542 800 aa19.61■□□□□ 0.73
SSU72-203ENST00000378725 ARHGAP29Q52LW3 1261 aa19.61■□□□□ 0.73
SSU72-203ENST00000378725 WDR59Q6PJI9 974 aa19.61■□□□□ 0.73
SSU72-203ENST00000378725 RSRC2Q7L4I2 434 aaKnown RBP19.61■□□□□ 0.73
SSU72-203ENST00000378725 SLC26A9Q7LBE3 791 aa19.61■□□□□ 0.73
SSU72-203ENST00000378725 RNF139Q8WU17 664 aa19.61■□□□□ 0.73
SSU72-203ENST00000378725 PIWIL1Q96J94 861 aaKnown RBP19.61■□□□□ 0.73
SSU72-203ENST00000378725 SMOC2Q9H3U7 446 aa19.61■□□□□ 0.73
SSU72-203ENST00000378725 POPDC2Q9HBU9 364 aa19.61■□□□□ 0.73
SSU72-203ENST00000378725 TRPV5Q9NQA5 729 aa19.61■□□□□ 0.73
SSU72-203ENST00000378725 SEPT11Q9NVA2 429 aaKnown RBP19.61■□□□□ 0.73
SSU72-203ENST00000378725 THG1LQ9NWX6 298 aaKnown RBP19.61■□□□□ 0.73
SSU72-203ENST00000378725 AKR1B15C9JRZ8 316 aaPredicted RBP19.6■□□□□ 0.73
SSU72-203ENST00000378725 ARNTLO00327 626 aa19.6■□□□□ 0.73
SSU72-203ENST00000378725 ZNF263O14978 683 aa19.6■□□□□ 0.73
SSU72-203ENST00000378725 GREM1O60565 184 aa19.6■□□□□ 0.73
SSU72-203ENST00000378725 NCAM1P13591 858 aa19.6■□□□□ 0.73
SSU72-203ENST00000378725 ALADP13716 330 aa19.6■□□□□ 0.73
SSU72-203ENST00000378725 GDI1P31150 447 aa19.6■□□□□ 0.73
SSU72-203ENST00000378725 ADKP55263 362 aaKnown RBP19.6■□□□□ 0.73
SSU72-203ENST00000378725 COG7P83436 770 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms