RNA–Protein interactions for RNA: ENST00000377038.7

DFFA-202, Transcript of DNA fragmentation factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DFFA, Length 6,032 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-202ENST00000377038 KCNA10Q16322 511 aa13.77□□□□□ -0.2
DFFA-202ENST00000377038 CCNG2Q16589 344 aa13.77□□□□□ -0.2
DFFA-202ENST00000377038 BMT2Q1RMZ1 405 aa13.77□□□□□ -0.2
DFFA-202ENST00000377038 TBCBQ99426 244 aa13.77□□□□□ -0.2
DFFA-202ENST00000377038 FICDQ9BVA6 458 aa13.77□□□□□ -0.2
DFFA-202ENST00000377038 APOL5Q9BWW9 433 aa13.77□□□□□ -0.2
DFFA-202ENST00000377038 SF3B1O75533 1304 aaKnown RBP eCLIP13.77□□□□□ -0.2
DFFA-202ENST00000377038 FAM47DPA6NHR8 397 aa13.77□□□□□ -0.2
DFFA-202ENST00000377038 SMPD1P17405 629 aa13.77□□□□□ -0.2
DFFA-202ENST00000377038 EFTUD2Q15029 972 aaKnown RBP eCLIP13.77□□□□□ -0.25e-13■■■■■ 88.9
DFFA-202ENST00000377038 C3orf20Q8ND61 904 aa13.77□□□□□ -0.2
DFFA-202ENST00000377038 FAM129AQ9BZQ8 928 aa13.77□□□□□ -0.2
DFFA-202ENST00000377038 ROPN1BQ9BZX4 212 aaPredicted RBP13.77□□□□□ -0.2
DFFA-202ENST00000377038 TRIM15Q9C019 465 aa13.77□□□□□ -0.2
DFFA-202ENST00000377038 ROPN1Q9HAT0 212 aaPredicted RBP13.77□□□□□ -0.2
DFFA-202ENST00000377038 FAM105AQ9NUU6 356 aa13.77□□□□□ -0.2
DFFA-202ENST00000377038 UBP1Q9NZI7 540 aa13.77□□□□□ -0.2
DFFA-202ENST00000377038 LTFP02788 710 aa13.77□□□□□ -0.21
DFFA-202ENST00000377038 CENPKQ9BS16 269 aa13.77□□□□□ -0.21
DFFA-202ENST00000377038 UXTQ9UBK9 157 aaPredicted RBP13.77□□□□□ -0.21
DFFA-202ENST00000377038 IPPQ9Y573 584 aa13.77□□□□□ -0.21
DFFA-202ENST00000377038 NR2E3Q9Y5X4 410 aa13.77□□□□□ -0.21
DFFA-202ENST00000377038 XYLBO75191 536 aa13.77□□□□□ -0.21
DFFA-202ENST00000377038 SERPIND1P05546 499 aa13.77□□□□□ -0.21
DFFA-202ENST00000377038 ASGR1P07306 291 aa13.77□□□□□ -0.21
DFFA-202ENST00000377038 WDR59Q6PJI9 974 aa13.77□□□□□ -0.21
DFFA-202ENST00000377038 SPATA17Q96L03 361 aa13.77□□□□□ -0.21
DFFA-202ENST00000377038 CEP41Q9BYV8 373 aa13.77□□□□□ -0.21
DFFA-202ENST00000377038 IKZF4Q9H2S9 585 aa13.77□□□□□ -0.21
DFFA-202ENST00000377038 SYNDIG1Q9H7V2 258 aa13.77□□□□□ -0.21
DFFA-202ENST00000377038 AVENQ9NQS1 362 aaPredicted RBP13.77□□□□□ -0.21
DFFA-202ENST00000377038 IGLV3-22A0A075B6J6 115 aa13.77□□□□□ -0.21
DFFA-202ENST00000377038 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.77□□□□□ -0.21
DFFA-202ENST00000377038 TREHO43280 583 aa13.77□□□□□ -0.21
DFFA-202ENST00000377038 MSL3Q8N5Y2 521 aaKnown RBP13.77□□□□□ -0.21
DFFA-202ENST00000377038 ZNF212Q9UDV6 495 aa13.77□□□□□ -0.21
DFFA-202ENST00000377038 SDR42E2A6NKP2 422 aa13.76□□□□□ -0.21
DFFA-202ENST00000377038 OR1E1P30953 314 aa13.76□□□□□ -0.21
DFFA-202ENST00000377038 ICAM3P32942 547 aa13.76□□□□□ -0.21
DFFA-202ENST00000377038 KCNMA1Q12791 1236 aa13.76□□□□□ -0.21
DFFA-202ENST00000377038 STX3Q13277 289 aa13.76□□□□□ -0.21
DFFA-202ENST00000377038 RBPJLQ9UBG7 517 aa13.76□□□□□ -0.21
DFFA-202ENST00000377038 LRP6O75581 1613 aa13.76□□□□□ -0.21
DFFA-202ENST00000377038 AMPD1P23109 780 aa13.76□□□□□ -0.21
DFFA-202ENST00000377038 HSD17B3P37058 310 aa13.76□□□□□ -0.21
DFFA-202ENST00000377038 CLK2P49760 499 aaKnown RBP13.76□□□□□ -0.21
DFFA-202ENST00000377038 MEA1Q16626 185 aa13.76□□□□□ -0.21
DFFA-202ENST00000377038 SLC7A5P2Q9GIP4 190 aa13.76□□□□□ -0.21
DFFA-202ENST00000377038 TAS2R14Q9NYV8 317 aa13.76□□□□□ -0.21
DFFA-202ENST00000377038 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.76□□□□□ -0.21
DFFA-202ENST00000377038 GIT1Q9Y2X7 761 aa13.76□□□□□ -0.21
DFFA-202ENST00000377038 COL1A1P02452 1464 aaPredicted RBP13.76□□□□□ -0.21
DFFA-202ENST00000377038 RAMP2O60895 175 aa13.76□□□□□ -0.21
DFFA-202ENST00000377038 DUSP11O75319 330 aaKnown RBP13.76□□□□□ -0.21
DFFA-202ENST00000377038 MIPP30301 263 aa13.76□□□□□ -0.21
DFFA-202ENST00000377038 SCNN1BP51168 640 aa13.76□□□□□ -0.21
DFFA-202ENST00000377038 RRP1BQ14684 758 aaKnown RBP13.76□□□□□ -0.21
DFFA-202ENST00000377038 PNKPQ96T60 521 aa13.76□□□□□ -0.21
DFFA-202ENST00000377038 HIPK3Q9H422 1215 aa13.76□□□□□ -0.21
DFFA-202ENST00000377038 WHRNQ9P202 907 aa13.76□□□□□ -0.21
DFFA-202ENST00000377038 ZNF214Q9UL59 606 aaPredicted RBP13.76□□□□□ -0.21
DFFA-202ENST00000377038 NCAM2O15394 837 aa13.76□□□□□ -0.21
DFFA-202ENST00000377038 NPR3P17342 541 aa13.76□□□□□ -0.21
DFFA-202ENST00000377038 MDH1P40925 334 aaKnown RBP13.76□□□□□ -0.21
DFFA-202ENST00000377038 CNPY4Q8N129 248 aa13.76□□□□□ -0.21
DFFA-202ENST00000377038 COLGALT1Q8NBJ5 622 aa13.76□□□□□ -0.21
DFFA-202ENST00000377038 B3GALNT2Q8NCR0 500 aa13.76□□□□□ -0.21
DFFA-202ENST00000377038 BSNDQ8WZ55 320 aa13.76□□□□□ -0.21
DFFA-202ENST00000377038 FGFBP2Q9BYJ0 223 aa13.76□□□□□ -0.21
DFFA-202ENST00000377038 MAF1Q9H063 256 aa13.76□□□□□ -0.21
DFFA-202ENST00000377038 RBM22Q9NW64 420 aaKnown RBP eCLIP13.76□□□□□ -0.21
DFFA-202ENST00000377038 MARCOQ9UEW3 520 aaPredicted RBP13.76□□□□□ -0.21
DFFA-202ENST00000377038 TERF2Q15554 542 aa13.76□□□□□ -0.21
DFFA-202ENST00000377038 CNGA2Q16280 664 aa13.76□□□□□ -0.21
DFFA-202ENST00000377038 AGBL2Q5U5Z8 902 aa13.76□□□□□ -0.21
DFFA-202ENST00000377038 LGI2Q8N0V4 545 aa13.76□□□□□ -0.21
DFFA-202ENST00000377038 FAM84AQ96KN4 292 aa13.76□□□□□ -0.21
DFFA-202ENST00000377038 TKTL2Q9H0I9 626 aa13.76□□□□□ -0.21
DFFA-202ENST00000377038 WWP1Q9H0M0 922 aa13.76□□□□□ -0.21
DFFA-202ENST00000377038 CDH9Q9ULB4 789 aa13.76□□□□□ -0.21
DFFA-202ENST00000377038 PLA2G4CQ9UP65 541 aa13.76□□□□□ -0.21
DFFA-202ENST00000377038 TRIM49D1C9J1S8 452 aa13.75□□□□□ -0.21
DFFA-202ENST00000377038 EPHB6O15197 1021 aa13.75□□□□□ -0.21
DFFA-202ENST00000377038 LZTS3O60299 673 aaPredicted RBP13.75□□□□□ -0.21
DFFA-202ENST00000377038 PYGMP11217 842 aa13.75□□□□□ -0.21
DFFA-202ENST00000377038 DARSP14868 501 aaKnown RBP13.75□□□□□ -0.21
DFFA-202ENST00000377038 MRNIPQ6NTE8 343 aa13.75□□□□□ -0.21
DFFA-202ENST00000377038 GRAMD1AQ96CP6 724 aa13.75□□□□□ -0.21
DFFA-202ENST00000377038 LTBP3Q9NS15 1303 aa13.75□□□□□ -0.21
DFFA-202ENST00000377038 LOC102724159A0A0B4J2E5 919 aa13.75□□□□□ -0.21
DFFA-202ENST00000377038 PWP2Q15269 919 aaKnown RBP13.75□□□□□ -0.21
DFFA-202ENST00000377038 ZACNQ401N2 412 aa13.75□□□□□ -0.21
DFFA-202ENST00000377038 SNX31Q8N9S9 440 aa13.75□□□□□ -0.21
DFFA-202ENST00000377038 BRI3BPQ8WY22 251 aa13.75□□□□□ -0.21
DFFA-202ENST00000377038 GANQ9H2C0 597 aa13.75□□□□□ -0.21
DFFA-202ENST00000377038 TMEM120BA0PK00 339 aa13.75□□□□□ -0.21
DFFA-202ENST00000377038 RNASEH1O60930 286 aaKnown RBP13.75□□□□□ -0.21
DFFA-202ENST00000377038 CTNNB1P35222 781 aa13.75□□□□□ -0.21
DFFA-202ENST00000377038 PRKCZQ05513 592 aa13.75□□□□□ -0.21
DFFA-202ENST00000377038 GRIK3Q13003 919 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms