RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 VPS37AQ8NEZ2 397 aa15.17■□□□□ 0.02
NOTCH4-201ENST00000375023 C10orf88Q9H8K7 445 aa15.17■□□□□ 0.02
NOTCH4-201ENST00000375023 OLFML3Q9NRN5 406 aa15.17■□□□□ 0.02
NOTCH4-201ENST00000375023 MTO1Q9Y2Z2 717 aaKnown RBP15.17■□□□□ 0.02
NOTCH4-201ENST00000375023 RCN1Q15293 331 aa15.17■□□□□ 0.02
NOTCH4-201ENST00000375023 PPM1LQ5SGD2 360 aa15.17■□□□□ 0.02
NOTCH4-201ENST00000375023 CATSPER2Q96P56 530 aa15.17■□□□□ 0.02
NOTCH4-201ENST00000375023 INTS13Q9NVM9 706 aa15.17■□□□□ 0.02
NOTCH4-201ENST00000375023 RHBDL2Q9NX52 303 aa15.17■□□□□ 0.02
NOTCH4-201ENST00000375023 ZMYM5Q9UJ78 669 aa15.17■□□□□ 0.02
NOTCH4-201ENST00000375023 PRKAB1Q9Y478 270 aa15.17■□□□□ 0.02
NOTCH4-201ENST00000375023 ZCCHC11Q5TAX3 1644 aaKnown RBP15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 C16orf96A6NNT2 1141 aa15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 EIF3DO15371 548 aaKnown RBP eCLIP15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 GJB6O95452 261 aa15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 FAM86B2P0C5J1 330 aa15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 TMEM253P0C7T8 217 aa15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 NPTX2P47972 431 aa15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 MAPK10P53779 464 aa15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 TRAF2Q12933 501 aa15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 AGAP9Q5VTM2 703 aa15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 CACHD1Q5VU97 1274 aa15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 TPD52L3Q96J77 140 aa15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 PDGFDQ9GZP0 370 aaPredicted RBP15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 GLI2P10070 1586 aa15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 LOC102724159A0A0B4J2E5 919 aa15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 RRN3P2A6NIE6 340 aa15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 CYP2C8P10632 490 aa15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 GARTP22102 1010 aa15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 EPHB3P54753 998 aa15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 NFYCQ13952 458 aa15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 PWP2Q15269 919 aaKnown RBP15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 UAP1L1Q3KQV9 507 aa15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 RDM1Q8NG50 284 aa15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 SERAC1Q96JX3 654 aa15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 TRAPPC11Q7Z392 1133 aa15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 MKNK1Q9BUB5 465 aa15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 USP18Q9UMW8 372 aa15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 A0A087X0T9 212 aa15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 ANXA9O76027 345 aa15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 ICAM1P05362 532 aa15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 FAM228BP0C875 321 aa15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 SYN1P17600 705 aa15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 SYTL5Q8TDW5 730 aaPredicted RBP15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 CDY2AQ9Y6F7 541 aa15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 CDY1Q9Y6F8 540 aa15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 PDS5AQ29RF7 1337 aaKnown RBP15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 MGAT4DA6NG13 374 aa15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 NFICP08651 508 aa15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 ENO2P09104 434 aaPredicted RBP15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 SPATA31D3P0C874 917 aa15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 BGNP21810 368 aa15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 FLT3P36888 993 aa15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 COPAP53621 1224 aa15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 PRAMEF19Q5SWL8 479 aa15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 DDI2Q5TDH0 399 aa15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 SPATA31D4Q6ZUB0 917 aa15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 SRLQ86TD4 932 aa15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 DNAJC9Q8WXX5 260 aa15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 KIF2CQ99661 725 aa15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 UBQLN1Q9UMX0 589 aaKnown RBP15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 HPS5Q9UPZ3 1129 aa15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 DNAJC16Q9Y2G8 782 aa15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 MORC2Q9Y6X9 1032 aaPredicted RBP15.16■□□□□ 0.02
NOTCH4-201ENST00000375023 UGT3A1Q6NUS8 523 aa15.15■□□□□ 0.02
NOTCH4-201ENST00000375023 DEPDC7Q96QD5 511 aa15.15■□□□□ 0.02
NOTCH4-201ENST00000375023 ARHGAP9Q9BRR9 750 aa15.15■□□□□ 0.02
NOTCH4-201ENST00000375023 CLPBQ9H078 707 aa15.15■□□□□ 0.02
NOTCH4-201ENST00000375023 RHBGQ9H310 441 aa15.15■□□□□ 0.02
NOTCH4-201ENST00000375023 CCDC134Q9H6E4 229 aa15.15■□□□□ 0.02
NOTCH4-201ENST00000375023 NSMCE4AQ9NXX6 385 aa15.15■□□□□ 0.02
NOTCH4-201ENST00000375023 DDX43Q9NXZ2 648 aaKnown RBP15.15■□□□□ 0.02
NOTCH4-201ENST00000375023 THP07101 528 aa15.15■□□□□ 0.02
NOTCH4-201ENST00000375023 TKTL1P51854 596 aa15.15■□□□□ 0.02
NOTCH4-201ENST00000375023 RPL10AP62906 217 aaKnown RBP15.15■□□□□ 0.02
NOTCH4-201ENST00000375023 NFIL3Q16649 462 aa15.15■□□□□ 0.02
NOTCH4-201ENST00000375023 DET1Q7L5Y6 550 aa15.15■□□□□ 0.02
NOTCH4-201ENST00000375023 MYO1HQ8N1T3 1032 aa15.15■□□□□ 0.02
NOTCH4-201ENST00000375023 ANKS1AQ92625 1134 aa15.15■□□□□ 0.02
NOTCH4-201ENST00000375023 USP6NLQ92738 828 aa15.15■□□□□ 0.02
NOTCH4-201ENST00000375023 SH3BP4Q9P0V3 963 aa15.15■□□□□ 0.02
NOTCH4-201ENST00000375023 GEMP55040 296 aa15.15■□□□□ 0.02
NOTCH4-201ENST00000375023 ERVK-24P63145 666 aa15.15■□□□□ 0.02
NOTCH4-201ENST00000375023 BOP1Q14137 746 aaKnown RBP15.15■□□□□ 0.02
NOTCH4-201ENST00000375023 TATDN2Q93075 761 aa15.15■□□□□ 0.02
NOTCH4-201ENST00000375023 DEFB118Q96PH6 123 aa15.15■□□□□ 0.02
NOTCH4-201ENST00000375023 SEPHS2Q99611 448 aa15.15■□□□□ 0.02
NOTCH4-201ENST00000375023 ILKAPQ9H0C8 392 aaPredicted RBP15.15■□□□□ 0.02
NOTCH4-201ENST00000375023 ATP6V1HQ9UI12 483 aa15.15■□□□□ 0.02
NOTCH4-201ENST00000375023 CYP11B2P19099 503 aa15.15■□□□□ 0.02
NOTCH4-201ENST00000375023 SLC13A5Q86YT5 568 aaPredicted RBP15.15■□□□□ 0.02
NOTCH4-201ENST00000375023 EMILIN2Q9BXX0 1053 aa15.15■□□□□ 0.02
NOTCH4-201ENST00000375023 DNAJC5Q9H3Z4 198 aa15.15■□□□□ 0.02
NOTCH4-201ENST00000375023 O00370 1275 aa15.15■□□□□ 0.02
NOTCH4-201ENST00000375023 GUCA1AP43080 201 aaPredicted RBP15.15■□□□□ 0.02
NOTCH4-201ENST00000375023 HIRAP54198 1017 aaPredicted RBP15.15■□□□□ 0.02
NOTCH4-201ENST00000375023 DYNC1I2Q13409 638 aaKnown RBP15.15■□□□□ 0.02
NOTCH4-201ENST00000375023 MPZL3Q6UWV2 235 aa15.15■□□□□ 0.02
NOTCH4-201ENST00000375023 TPGS1Q6ZTW0 290 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms