RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 GOLGA8QA0A0J9YX86 632 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 GSTTP1A0A1W2PQM5 241 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 USP17L15C9J2P7 530 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 USP17L10C9JJH3 530 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 USP17L13C9JLJ4 530 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 USP17L12C9JPN9 530 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 USP17L11C9JVI0 530 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 USP17L21D6R901 530 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 USP17L18D6R9N7 530 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 USP17L22D6RA61 530 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 USP17L17D6RBQ6 530 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 USP17L19D6RCP7 530 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 USP17L20D6RJB6 530 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 H0YJX3 145 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 GRM8O00222 908 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 ADCY3O60266 1144 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 CDC123O75794 336 aaPredicted RBP8.24□□□□□ -1.09
USP48-203ENST00000374732 KRT5P13647 590 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 RFC1P35251 1148 aaPredicted RBP8.24□□□□□ -1.09
USP48-203ENST00000374732 ME1P48163 572 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 CLK3P49761 638 aaKnown RBP8.24□□□□□ -1.09
USP48-203ENST00000374732 IST1P53990 364 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 ADARP55265 1226 aaKnown RBP8.24□□□□□ -1.09
USP48-203ENST00000374732 PEX3P56589 373 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 USP17L24Q0WX57 530 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 GRSF1Q12849 480 aaKnown RBP eCLIP8.24□□□□□ -1.09
USP48-203ENST00000374732 AAK1Q2M2I8 961 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 LEXMQ3ZCV2 418 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 MAP3K21Q5TCX8 1036 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 DEGS2Q6QHC5 323 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 SESTD1Q86VW0 696 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 CMIPQ8IY22 773 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 AFAP1L2Q8N4X5 818 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 TBC1D19Q8N5T2 526 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 CNNM3Q8NE01 707 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 HAUS1Q96CS2 278 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 STAMBPL1Q96FJ0 436 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 INTS4Q96HW7 963 aaKnown RBP8.24□□□□□ -1.09
USP48-203ENST00000374732 ZNF570Q96NI8 536 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 UHRF1Q96T88 793 aaPredicted RBP8.24□□□□□ -1.09
USP48-203ENST00000374732 CCDC86Q9H6F5 360 aaKnown RBP8.24□□□□□ -1.09
USP48-203ENST00000374732 INTS9Q9NV88 658 aaKnown RBP8.24□□□□□ -1.09
USP48-203ENST00000374732 ACTR3BQ9P1U1 418 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 KCNN3Q9UGI6 736 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 CYB5R1Q9UHQ9 305 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 A0A0U1RQJ8 604 aa8.23□□□□□ -1.09
USP48-203ENST00000374732 L7N2F9 121 aa8.23□□□□□ -1.09
USP48-203ENST00000374732 CLDN3O15551 220 aa8.23□□□□□ -1.09
USP48-203ENST00000374732 COL6A2P12110 1019 aa8.23□□□□□ -1.09
USP48-203ENST00000374732 SLC9A1P19634 815 aa8.23□□□□□ -1.09
USP48-203ENST00000374732 RNF144AP50876 292 aaPredicted RBP8.23□□□□□ -1.09
USP48-203ENST00000374732 AFF3P51826 1226 aaKnown RBP8.23□□□□□ -1.09
USP48-203ENST00000374732 CUL4AQ13619 759 aa8.23□□□□□ -1.09
USP48-203ENST00000374732 STAT4Q14765 748 aa8.23□□□□□ -1.09
USP48-203ENST00000374732 SLC30A10Q6XR72 485 aa8.23□□□□□ -1.09
USP48-203ENST00000374732 SPATC1Q76KD6 591 aa8.23□□□□□ -1.09
USP48-203ENST00000374732 RNF135Q8IUD6 432 aa8.23□□□□□ -1.09
USP48-203ENST00000374732 UNC45BQ8IWX7 931 aa8.23□□□□□ -1.09
USP48-203ENST00000374732 SYTL5Q8TDW5 730 aaPredicted RBP8.23□□□□□ -1.09
USP48-203ENST00000374732 RAB7BQ96AH8 199 aa8.23□□□□□ -1.09
USP48-203ENST00000374732 ZNF669Q96BR6 464 aaPredicted RBP8.23□□□□□ -1.09
USP48-203ENST00000374732 NMD3Q96D46 503 aaKnown RBP8.23□□□□□ -1.09
USP48-203ENST00000374732 SH3GL2Q99962 352 aa8.23□□□□□ -1.09
USP48-203ENST00000374732 CPNE7Q9UBL6 633 aa8.23□□□□□ -1.09
USP48-203ENST00000374732 HPS5Q9UPZ3 1129 aa8.23□□□□□ -1.09
USP48-203ENST00000374732 POLHQ9Y253 713 aa8.23□□□□□ -1.09
USP48-203ENST00000374732 TTC26A0AVF1 554 aa8.23□□□□□ -1.09
USP48-203ENST00000374732 ADRB2P07550 413 aa8.23□□□□□ -1.09
USP48-203ENST00000374732 CYP4F2P78329 520 aa8.23□□□□□ -1.09
USP48-203ENST00000374732 CYP4F3Q08477 520 aa8.23□□□□□ -1.09
USP48-203ENST00000374732 NR1H3Q13133 447 aa8.23□□□□□ -1.09
USP48-203ENST00000374732 PPIL2Q13356 520 aa8.23□□□□□ -1.09
USP48-203ENST00000374732 MCMDC2Q4G0Z9 681 aa8.23□□□□□ -1.09
USP48-203ENST00000374732 PLA2G4FQ68DD2 849 aa8.23□□□□□ -1.09
USP48-203ENST00000374732 STXBP4Q6ZWJ1 553 aa8.23□□□□□ -1.09
USP48-203ENST00000374732 NIM1KQ8IY84 436 aa8.23□□□□□ -1.09
USP48-203ENST00000374732 ZGPATQ8N5A5 531 aaKnown RBP8.23□□□□□ -1.09
USP48-203ENST00000374732 DDHD1Q8NEL9 900 aa8.23□□□□□ -1.09
USP48-203ENST00000374732 METTL6Q8TCB7 284 aa8.23□□□□□ -1.09
USP48-203ENST00000374732 RRP36Q96EU6 259 aaKnown RBP8.23□□□□□ -1.09
USP48-203ENST00000374732 OLFM3Q96PB7 478 aa8.23□□□□□ -1.09
USP48-203ENST00000374732 PRRX2Q99811 253 aa8.23□□□□□ -1.09
USP48-203ENST00000374732 CAAP1Q9H8G2 361 aa8.23□□□□□ -1.09
USP48-203ENST00000374732 SP110Q9HB58 689 aa8.23□□□□□ -1.09
USP48-203ENST00000374732 CDHR5Q9HBB8 845 aa8.23□□□□□ -1.09
USP48-203ENST00000374732 GMEB2Q9UKD1 530 aa8.23□□□□□ -1.09
USP48-203ENST00000374732 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.23□□□□□ -1.09
USP48-203ENST00000374732 V9GY48 417 aaPredicted RBP8.23□□□□□ -1.09
USP48-203ENST00000374732 EIF4E1BA6NMX2 242 aaKnown RBP8.22□□□□□ -1.09
USP48-203ENST00000374732 GOLGA8BA8MQT2 603 aa8.22□□□□□ -1.09
USP48-203ENST00000374732 TARM1B6A8C7 271 aa8.22□□□□□ -1.09
USP48-203ENST00000374732 PCDH17O14917 1159 aa8.22□□□□□ -1.09
USP48-203ENST00000374732 HEXIM1O94992 359 aaKnown RBP8.22□□□□□ -1.09
USP48-203ENST00000374732 PRAMEF12O95522 483 aa8.22□□□□□ -1.09
USP48-203ENST00000374732 CHEK2O96017 543 aa8.22□□□□□ -1.09
USP48-203ENST00000374732 GSTM1P09488 218 aa8.22□□□□□ -1.09
USP48-203ENST00000374732 CLUP10909 449 aa8.22□□□□□ -1.09
USP48-203ENST00000374732 RAB14P61106 215 aa8.22□□□□□ -1.09
USP48-203ENST00000374732 COPS2P61201 443 aa8.22□□□□□ -1.09
USP48-203ENST00000374732 ABATP80404 500 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms