RNA–Protein interactions for RNA: ENST00000373020.8

TSPAN6-201, Transcript of tetraspanin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN6, Length 2,206 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6-201ENST00000373020 SLC26A11Q86WA9 606 aa13.05□□□□□ -0.32
TSPAN6-201ENST00000373020 MCUQ8NE86 351 aa13.05□□□□□ -0.32
TSPAN6-201ENST00000373020 CDCA5Q96FF9 252 aa13.05□□□□□ -0.32
TSPAN6-201ENST00000373020 MRPL45Q9BRJ2 306 aaKnown RBP13.05□□□□□ -0.32
TSPAN6-201ENST00000373020 KATNBL1Q9H079 304 aa13.05□□□□□ -0.32
TSPAN6-201ENST00000373020 MANSC1Q9H8J5 431 aa13.05□□□□□ -0.32
TSPAN6-201ENST00000373020 NPHS2Q9NP85 383 aa13.05□□□□□ -0.32
TSPAN6-201ENST00000373020 NGRNQ9NPE2 291 aaKnown RBP13.05□□□□□ -0.32
TSPAN6-201ENST00000373020 LNPEPQ9UIQ6 1025 aa13.05□□□□□ -0.32
TSPAN6-201ENST00000373020 HAO1Q9UJM8 370 aa13.05□□□□□ -0.32
TSPAN6-201ENST00000373020 NUMBLQ9Y6R0 609 aa13.05□□□□□ -0.32
TSPAN6-201ENST00000373020 SRCAPQ6ZRS2 3230 aa13.05□□□□□ -0.32
TSPAN6-201ENST00000373020 HNRNPCL1O60812 293 aaKnown RBP13.05□□□□□ -0.32
TSPAN6-201ENST00000373020 AVILO75366 819 aa13.05□□□□□ -0.32
TSPAN6-201ENST00000373020 TGDSO95455 350 aa13.05□□□□□ -0.32
TSPAN6-201ENST00000373020 ZBED1O96006 694 aa13.05□□□□□ -0.32
TSPAN6-201ENST00000373020 GSTA2P09210 222 aa13.05□□□□□ -0.32
TSPAN6-201ENST00000373020 HOXD8P13378 290 aaPredicted RBP13.05□□□□□ -0.32
TSPAN6-201ENST00000373020 CCNFP41002 786 aa13.05□□□□□ -0.32
TSPAN6-201ENST00000373020 PTPN9P43378 593 aa13.05□□□□□ -0.32
TSPAN6-201ENST00000373020 HDAC4P56524 1084 aa13.05□□□□□ -0.32
TSPAN6-201ENST00000373020 ATP11AP98196 1134 aa13.05□□□□□ -0.32
TSPAN6-201ENST00000373020 PRKD1Q15139 912 aaPredicted RBP13.05□□□□□ -0.32
TSPAN6-201ENST00000373020 SEPT7Q16181 437 aaKnown RBP13.05□□□□□ -0.32
TSPAN6-201ENST00000373020 ARHGAP17Q68EM7 881 aa13.05□□□□□ -0.32
TSPAN6-201ENST00000373020 CLNKQ7Z7G1 428 aa13.05□□□□□ -0.32
TSPAN6-201ENST00000373020 ZDHHC17Q8IUH5 632 aa13.05□□□□□ -0.32
TSPAN6-201ENST00000373020 NLRP7Q8WX94 980 aa13.05□□□□□ -0.32
TSPAN6-201ENST00000373020 OPTNQ96CV9 577 aa13.05□□□□□ -0.32
TSPAN6-201ENST00000373020 LRRC39Q96DD0 335 aa13.05□□□□□ -0.32
TSPAN6-201ENST00000373020 MYCBPQ99417 103 aaPredicted RBP13.05□□□□□ -0.32
TSPAN6-201ENST00000373020 KLC2Q9H0B6 622 aa13.05□□□□□ -0.32
TSPAN6-201ENST00000373020 PLEKHA5Q9HAU0 1116 aa13.05□□□□□ -0.32
TSPAN6-201ENST00000373020 ETNK2Q9NVF9 386 aa13.05□□□□□ -0.32
TSPAN6-201ENST00000373020 MKS1Q9NXB0 559 aa13.05□□□□□ -0.32
TSPAN6-201ENST00000373020 GTF2IRD1Q9UHL9 959 aa13.05□□□□□ -0.32
TSPAN6-201ENST00000373020 KLF11O14901 512 aa13.04□□□□□ -0.32
TSPAN6-201ENST00000373020 ELF1P32519 619 aa13.04□□□□□ -0.32
TSPAN6-201ENST00000373020 SCNN1AP37088 669 aa13.04□□□□□ -0.32
TSPAN6-201ENST00000373020 ZBTB6Q15916 424 aa13.04□□□□□ -0.32
TSPAN6-201ENST00000373020 DPYSL2Q16555 572 aa13.04□□□□□ -0.32
TSPAN6-201ENST00000373020 MARCH8Q5T0T0 291 aa13.04□□□□□ -0.32
TSPAN6-201ENST00000373020 TTC39BQ5VTQ0 682 aaPredicted RBP13.04□□□□□ -0.32
TSPAN6-201ENST00000373020 C4orf22Q6V702 233 aa13.04□□□□□ -0.32
TSPAN6-201ENST00000373020 ZNF534Q76KX8 674 aa13.04□□□□□ -0.32
TSPAN6-201ENST00000373020 CDKL3Q8IVW4 592 aaPredicted RBP13.04□□□□□ -0.32
TSPAN6-201ENST00000373020 LRRC52Q8N7C0 313 aa13.04□□□□□ -0.32
TSPAN6-201ENST00000373020 RFWD2Q8NHY2 731 aa13.04□□□□□ -0.32
TSPAN6-201ENST00000373020 APBB2Q92870 758 aa13.04□□□□□ -0.32
TSPAN6-201ENST00000373020 SNX27Q96L92 541 aa13.04□□□□□ -0.32
TSPAN6-201ENST00000373020 TSSK1BQ9BXA7 367 aa13.04□□□□□ -0.32
TSPAN6-201ENST00000373020 NRDE2Q9H7Z3 1164 aa13.04□□□□□ -0.32
TSPAN6-201ENST00000373020 GEMIN8Q9NWZ8 242 aaKnown RBP13.04□□□□□ -0.32
TSPAN6-201ENST00000373020 ZFP69BQ9UJL9 534 aa13.04□□□□□ -0.32
TSPAN6-201ENST00000373020 RPL26L1Q9UNX3 145 aaKnown RBP13.04□□□□□ -0.32
TSPAN6-201ENST00000373020 IKBKGQ9Y6K9 419 aa13.04□□□□□ -0.32
TSPAN6-201ENST00000373020 WDR91A4D1P6 747 aa13.04□□□□□ -0.32
TSPAN6-201ENST00000373020 TRDMT1O14717 391 aaKnown RBP13.04□□□□□ -0.32
TSPAN6-201ENST00000373020 PPEF2O14830 753 aa13.04□□□□□ -0.32
TSPAN6-201ENST00000373020 DNAJC6O75061 913 aa13.04□□□□□ -0.32
TSPAN6-201ENST00000373020 ANP32DO95626 131 aa13.04□□□□□ -0.32
TSPAN6-201ENST00000373020 TPSB2P20231 275 aa13.04□□□□□ -0.32
TSPAN6-201ENST00000373020 RPL34P49207 117 aaKnown RBP13.04□□□□□ -0.32
TSPAN6-201ENST00000373020 RASSF2P50749 326 aa13.04□□□□□ -0.32
TSPAN6-201ENST00000373020 CCNG1P51959 295 aa13.04□□□□□ -0.32
TSPAN6-201ENST00000373020 TPSAB1Q15661 275 aa13.04□□□□□ -0.32
TSPAN6-201ENST00000373020 TAF1BQ53T94 588 aaPredicted RBP13.04□□□□□ -0.32
TSPAN6-201ENST00000373020 ARCQ7LC44 396 aa13.04□□□□□ -0.32
TSPAN6-201ENST00000373020 ACOT1Q86TX2 421 aa13.04□□□□□ -0.32
TSPAN6-201ENST00000373020 UNC93AQ86WB7 457 aa13.04□□□□□ -0.32
TSPAN6-201ENST00000373020 GIMAP7Q8NHV1 300 aa13.04□□□□□ -0.32
TSPAN6-201ENST00000373020 CENPIQ92674 756 aaPredicted RBP13.04□□□□□ -0.32
TSPAN6-201ENST00000373020 ZMAT2Q96NC0 199 aaKnown RBP13.04□□□□□ -0.32
TSPAN6-201ENST00000373020 FAM111AQ96PZ2 611 aa13.04□□□□□ -0.32
TSPAN6-201ENST00000373020 TBC1D10AQ9BXI6 508 aa13.04□□□□□ -0.32
TSPAN6-201ENST00000373020 TRIM55Q9BYV6 548 aa13.04□□□□□ -0.32
TSPAN6-201ENST00000373020 CXCL16Q9H2A7 254 aa13.04□□□□□ -0.32
TSPAN6-201ENST00000373020 HEY1Q9Y5J3 304 aa13.04□□□□□ -0.32
TSPAN6-201ENST00000373020 CBX6O95503 412 aa13.03□□□□□ -0.32
TSPAN6-201ENST00000373020 PYGBP11216 843 aa13.03□□□□□ -0.32
TSPAN6-201ENST00000373020 CYP2F1P24903 491 aa13.03□□□□□ -0.32
TSPAN6-201ENST00000373020 GJA5P36382 358 aa13.03□□□□□ -0.32
TSPAN6-201ENST00000373020 GCLCP48506 637 aaPredicted RBP13.03□□□□□ -0.32
TSPAN6-201ENST00000373020 GRIK4Q16099 956 aa13.03□□□□□ -0.32
TSPAN6-201ENST00000373020 SCYL2Q6P3W7 929 aa13.03□□□□□ -0.32
TSPAN6-201ENST00000373020 SLC26A9Q7LBE3 791 aa13.03□□□□□ -0.32
TSPAN6-201ENST00000373020 LRRC6Q86X45 466 aa13.03□□□□□ -0.32
TSPAN6-201ENST00000373020 FAM13CQ8NE31 585 aa13.03□□□□□ -0.32
TSPAN6-201ENST00000373020 GTF3C2Q8WUA4 911 aaPredicted RBP13.03□□□□□ -0.32
TSPAN6-201ENST00000373020 SKA1Q96BD8 255 aa13.03□□□□□ -0.32
TSPAN6-201ENST00000373020 CFAP36Q96G28 342 aa13.03□□□□□ -0.32
TSPAN6-201ENST00000373020 KCNK13Q9HB14 408 aa13.03□□□□□ -0.32
TSPAN6-201ENST00000373020 ZC3H7BQ9UGR2 993 aaKnown RBP13.03□□□□□ -0.32
TSPAN6-201ENST00000373020 SLC15A5A6NIM6 579 aa13.03□□□□□ -0.32
TSPAN6-201ENST00000373020 CXorf49A8MYA2 514 aaPredicted RBP13.03□□□□□ -0.32
TSPAN6-201ENST00000373020 TRIM49D1C9J1S8 452 aa13.03□□□□□ -0.32
TSPAN6-201ENST00000373020 H3BRB1 525 aa13.03□□□□□ -0.32
TSPAN6-201ENST00000373020 GCATO75600 419 aa13.03□□□□□ -0.32
TSPAN6-201ENST00000373020 TOMM70O94826 608 aa13.03□□□□□ -0.32
TSPAN6-201ENST00000373020 PTPN4P29074 926 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms