RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 PGM3O95394 542 aa13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 LGALS2P05162 132 aa13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 APRTP07741 180 aa13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 RALBP11234 206 aa13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 ENO3P13929 434 aaPredicted RBP13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 HSPA13P48723 471 aa13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 CASP4P49662 377 aa13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 ERFP50548 548 aa13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 UBE3AQ05086 875 aa13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 KPNB1Q14974 876 aaKnown RBP13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 CYP2W1Q8TAV3 490 aa13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 CASKIN2Q8WXE0 1202 aa13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 WDR18Q9BV38 432 aa13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 OSBPL8Q9BZF1 889 aa13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 PRPF4O43172 522 aaKnown RBP eCLIP13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 SRP72O76094 671 aaKnown RBP13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 WDR47O94967 919 aa13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 ARL4DP49703 201 aa13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 EIF2B2P49770 351 aaKnown RBP13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 ITGA8P53708 1063 aa13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 MAP2K5Q13163 448 aa13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 SYCP2LQ5T4T6 812 aa13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 OTOP1Q7RTM1 612 aa13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 SNX32Q86XE0 403 aa13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 CELF4Q9BZC1 486 aaKnown RBP13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 KRT16P08779 473 aa13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 DCTN2Q13561 401 aaKnown RBP13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 SMTNL2Q2TAL5 461 aa13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 FBXO47Q5MNV8 452 aa13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 CELF3Q5SZQ8 465 aaKnown RBP13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 MOB2Q70IA6 237 aa13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 LRRC34Q8IZ02 419 aa13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 SLC25A41Q8N5S1 370 aa13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 DDHD1Q8NEL9 900 aa13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 RAB6BQ9NRW1 208 aa13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 SALL3Q9BXA9 1300 aa13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 MTSS1O43312 755 aa13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 FBXO21O94952 628 aa13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 PON1P27169 355 aa13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 SETD3Q86TU7 594 aaPredicted RBP13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 PRPF39Q86UA1 669 aaKnown RBP13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 TRAPPC12Q8WVT3 735 aa13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 RPRD1AQ96P16 312 aaPredicted RBP13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 APBA2Q99767 749 aa13.75□□□□□ -0.21
RAPGEF1-201ENST00000372189 TBC1D4O60343 1298 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 NDUFS3O75489 264 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 S100A6P06703 90 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 HIST1H2AGP0C0S8 130 aaPredicted RBP13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 HIST1H2ADP20671 130 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 KLRC2P26717 231 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 PDAP1Q13442 181 aaKnown RBP13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 SLC29A2Q14542 456 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 C11orf88Q6PI97 169 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 PRUNE1Q86TP1 453 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 RASSF5Q8WWW0 418 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 ATXN7L3BQ96GX2 97 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 HIST1H2AHQ96KK5 128 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 CCT7Q99832 543 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 HIST1H2AJQ99878 128 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 H2AFJQ9BTM1 129 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 CYP3A43Q9HB55 503 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 KBTBD4Q9NVX7 518 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 SLC25A13Q9UJS0 675 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 IPPQ9Y573 584 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 TLR2O60603 784 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 COMTP21964 271 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 DSG1Q02413 1049 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 MIB1Q86YT6 1006 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 PLD3Q8IV08 490 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 PCMTD2Q9NV79 361 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 IL1RAPL1Q9NZN1 696 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 CDYLQ9Y232 598 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 SNRPAP09012 282 aaKnown RBP13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 CDH2P19022 906 aaPredicted RBP13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 AKAP5P24588 427 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 COILP38432 576 aaPredicted RBP13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 CTCFP49711 727 aaPredicted RBP13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 IKBKEQ14164 716 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 POP1Q99575 1024 aaKnown RBP13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 TMBIM4Q9HC24 238 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 CYP39A1Q9NYL5 469 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 MARCOQ9UEW3 520 aaPredicted RBP13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 PRLRP16471 622 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 HLA-DPA1P20036 260 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 EPHB2P29323 1055 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 AVPR1AP37288 418 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 SCTRP47872 440 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 MCCD1P59942 119 aaPredicted RBP13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 NFE2Q16621 373 aaPredicted RBP13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 HERC6Q8IVU3 1022 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 MDM1Q8TC05 714 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 HIC2Q96JB3 615 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 KDM4CQ9H3R0 1056 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 AIPL1Q9NZN9 384 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 RIC1Q4ADV7 1423 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 SNTNA6NMZ2 147 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 PJA2O43164 708 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 RASSF9O75901 435 aa13.74□□□□□ -0.21
RAPGEF1-201ENST00000372189 SLITRK3O94933 977 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms