RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 C5orf22Q49AR2 442 aa8.82□□□□□ -1
LCA5-201ENST00000369846 PARP10Q53GL7 1025 aa8.82□□□□□ -1
LCA5-201ENST00000369846 GALNT18Q6P9A2 607 aa8.82□□□□□ -1
LCA5-201ENST00000369846 GJB7Q6PEY0 223 aa8.82□□□□□ -1
LCA5-201ENST00000369846 KRT74Q7RTS7 529 aa8.82□□□□□ -1
LCA5-201ENST00000369846 OTOAQ7RTW8 1153 aa8.82□□□□□ -1
LCA5-201ENST00000369846 DGKHQ86XP1 1220 aa8.82□□□□□ -1
LCA5-201ENST00000369846 CAMK1DQ8IU85 385 aa8.82□□□□□ -1
LCA5-201ENST00000369846 CREG2Q8IUH2 290 aa8.82□□□□□ -1
LCA5-201ENST00000369846 CAMKK1Q8N5S9 505 aa8.82□□□□□ -1
LCA5-201ENST00000369846 CABLES1Q8TDN4 633 aa8.82□□□□□ -1
LCA5-201ENST00000369846 S100ZQ8WXG8 99 aa8.82□□□□□ -1
LCA5-201ENST00000369846 IFT43Q96FT9 208 aa8.82□□□□□ -1
LCA5-201ENST00000369846 DMRTB1Q96MA1 342 aa8.82□□□□□ -1
LCA5-201ENST00000369846 NUDT12Q9BQG2 462 aa8.82□□□□□ -1
LCA5-201ENST00000369846 C9orf16Q9BUW7 83 aa8.82□□□□□ -1
LCA5-201ENST00000369846 OSBPL7Q9BZF2 842 aa8.82□□□□□ -1
LCA5-201ENST00000369846 AVENQ9NQS1 362 aaPredicted RBP8.82□□□□□ -1
LCA5-201ENST00000369846 ADAM30Q9UKF2 790 aa8.82□□□□□ -1
LCA5-201ENST00000369846 MRPS7Q9Y2R9 242 aaKnown RBP8.82□□□□□ -1
LCA5-201ENST00000369846 ZNF263O14978 683 aa8.82□□□□□ -1
LCA5-201ENST00000369846 CCNT2O60583 730 aaKnown RBP8.82□□□□□ -1
LCA5-201ENST00000369846 MAP3K6O95382 1288 aa8.82□□□□□ -1
LCA5-201ENST00000369846 CD44P16070 742 aaKnown RBP8.82□□□□□ -1
LCA5-201ENST00000369846 ERCC2P18074 760 aa8.82□□□□□ -1
LCA5-201ENST00000369846 SLC15A2Q16348 729 aa8.82□□□□□ -1
LCA5-201ENST00000369846 DDR2Q16832 855 aa8.82□□□□□ -1
LCA5-201ENST00000369846 PFKFB3Q16875 520 aaPredicted RBP8.82□□□□□ -1
LCA5-201ENST00000369846 CERKLQ49MI3 558 aaPredicted RBP8.82□□□□□ -1
LCA5-201ENST00000369846 GLRA4Q5JXX5 417 aa8.82□□□□□ -1
LCA5-201ENST00000369846 KLHDC7AQ5VTJ3 777 aa8.82□□□□□ -1
LCA5-201ENST00000369846 PAGE2Q7Z2X7 111 aa8.82□□□□□ -1
LCA5-201ENST00000369846 AMIGO2Q86SJ2 522 aa8.82□□□□□ -1
LCA5-201ENST00000369846 STX12Q86Y82 276 aa8.82□□□□□ -1
LCA5-201ENST00000369846 PCDH20Q8N6Y1 951 aaKnown RBP8.82□□□□□ -1
LCA5-201ENST00000369846 SH3TC2Q8TF17 1288 aa8.82□□□□□ -1
LCA5-201ENST00000369846 KRT35Q92764 455 aa8.82□□□□□ -1
LCA5-201ENST00000369846 RNF38Q9H0F5 515 aa8.82□□□□□ -1
LCA5-201ENST00000369846 GREM2Q9H772 168 aa8.82□□□□□ -1
LCA5-201ENST00000369846 OSGEPQ9NPF4 335 aa8.82□□□□□ -1
LCA5-201ENST00000369846 FBXO28Q9NVF7 368 aa8.82□□□□□ -1
LCA5-201ENST00000369846 PAK5Q9P286 719 aa8.82□□□□□ -1
LCA5-201ENST00000369846 PSMD11O00231 422 aa8.82□□□□□ -1
LCA5-201ENST00000369846 TM9SF1O15321 606 aa8.82□□□□□ -1
LCA5-201ENST00000369846 POLBP06746 335 aa8.82□□□□□ -1
LCA5-201ENST00000369846 RFX1P22670 979 aa8.82□□□□□ -1
LCA5-201ENST00000369846 CASP4P49662 377 aa8.82□□□□□ -1
LCA5-201ENST00000369846 BNC1Q01954 994 aa8.82□□□□□ -1
LCA5-201ENST00000369846 RHAGQ02094 409 aa8.82□□□□□ -1
LCA5-201ENST00000369846 MTMR2Q13614 643 aa8.82□□□□□ -1
LCA5-201ENST00000369846 ALCAMQ13740 583 aa8.82□□□□□ -1
LCA5-201ENST00000369846 ZNF699Q32M78 642 aa8.82□□□□□ -1
LCA5-201ENST00000369846 BROXQ5VW32 411 aa8.82□□□□□ -1
LCA5-201ENST00000369846 FAAH2Q6GMR7 532 aa8.82□□□□□ -1
LCA5-201ENST00000369846 SNRNP48Q6IEG0 339 aaKnown RBP8.82□□□□□ -1
LCA5-201ENST00000369846 MZT2BQ6NZ67 158 aa8.82□□□□□ -1
LCA5-201ENST00000369846 PACS1Q6VY07 963 aa8.82□□□□□ -1
LCA5-201ENST00000369846 TRIM72Q6ZMU5 477 aa8.82□□□□□ -1
LCA5-201ENST00000369846 FASTKD5Q7L8L6 764 aaKnown RBP8.82□□□□□ -1
LCA5-201ENST00000369846 PTAR1Q7Z6K3 402 aaPredicted RBP8.82□□□□□ -1
LCA5-201ENST00000369846 KRT77Q7Z794 578 aa8.82□□□□□ -1
LCA5-201ENST00000369846 MSL3Q8N5Y2 521 aaKnown RBP8.82□□□□□ -1
LCA5-201ENST00000369846 KCTD17Q8N5Z5 321 aa8.82□□□□□ -1
LCA5-201ENST00000369846 RNF139Q8WU17 664 aa8.82□□□□□ -1
LCA5-201ENST00000369846 FAM172AQ8WUF8 416 aa8.82□□□□□ -1
LCA5-201ENST00000369846 KAZALD1Q96I82 304 aa8.82□□□□□ -1
LCA5-201ENST00000369846 KIFC1Q9BW19 673 aa8.82□□□□□ -1
LCA5-201ENST00000369846 SIK2Q9H0K1 926 aa8.82□□□□□ -1
LCA5-201ENST00000369846 GPR108Q9NPR9 543 aa8.82□□□□□ -1
LCA5-201ENST00000369846 ING3Q9NXR8 418 aa8.82□□□□□ -1
LCA5-201ENST00000369846 OGDHLQ9ULD0 1010 aa8.82□□□□□ -1
LCA5-201ENST00000369846 A0A0U1RQJ8 604 aa8.82□□□□□ -1
LCA5-201ENST00000369846 PSIP1O75475 530 aaKnown RBP8.82□□□□□ -1
LCA5-201ENST00000369846 USP17L8P0C7I0 530 aa8.82□□□□□ -1
LCA5-201ENST00000369846 CPA3P15088 417 aa8.82□□□□□ -1
LCA5-201ENST00000369846 NR4A1P22736 598 aa8.82□□□□□ -1
LCA5-201ENST00000369846 NMT1P30419 496 aaKnown RBP8.82□□□□□ -1
LCA5-201ENST00000369846 KPNA1P52294 538 aaPredicted RBP8.82□□□□□ -1
LCA5-201ENST00000369846 CENPCQ03188 943 aa8.82□□□□□ -1
LCA5-201ENST00000369846 TRAP1Q12931 704 aaKnown RBP8.82□□□□□ -1
LCA5-201ENST00000369846 CNPY1Q3B7I2 92 aa8.82□□□□□ -1
LCA5-201ENST00000369846 FAM47BQ8NA70 645 aa8.82□□□□□ -1
LCA5-201ENST00000369846 TADA1Q96BN2 335 aa8.82□□□□□ -1
LCA5-201ENST00000369846 TAMM41Q96BW9 452 aa8.82□□□□□ -1
LCA5-201ENST00000369846 MCEEQ96PE7 176 aa8.82□□□□□ -1
LCA5-201ENST00000369846 STRBPQ96SI9 672 aaKnown RBP8.82□□□□□ -1
LCA5-201ENST00000369846 MLPHQ9BV36 600 aaPredicted RBP8.82□□□□□ -1
LCA5-201ENST00000369846 IRF2BPLQ9H1B7 796 aa8.82□□□□□ -1
LCA5-201ENST00000369846 RIBC2Q9H4K1 309 aa8.82□□□□□ -1
LCA5-201ENST00000369846 SP140LQ9H930 580 aa8.82□□□□□ -1
LCA5-201ENST00000369846 GPBP1L1Q9HC44 474 aaPredicted RBP8.82□□□□□ -1
LCA5-201ENST00000369846 PTPRHQ9HD43 1115 aa8.82□□□□□ -1
LCA5-201ENST00000369846 WHRNQ9P202 907 aa8.82□□□□□ -1
LCA5-201ENST00000369846 CROTQ9UKG9 612 aa8.82□□□□□ -1
LCA5-201ENST00000369846 DGKBQ9Y6T7 804 aa8.82□□□□□ -1
LCA5-201ENST00000369846 CLRN2A0PK11 232 aa8.81□□□□□ -1
LCA5-201ENST00000369846 SRRM3A6NNA2 597 aaPredicted RBP8.81□□□□□ -1
LCA5-201ENST00000369846 DDX3XO00571 662 aaKnown RBP eCLIP8.81□□□□□ -1
LCA5-201ENST00000369846 SSNA1O43805 119 aa8.81□□□□□ -1
LCA5-201ENST00000369846 TDP2O95551 362 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms