RNA–Protein interactions for RNA: ENST00000369258.8

CHD1L-202, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1L, Length 2,967 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-202ENST00000369258 TOM1L1O75674 476 aa13.41□□□□□ -0.26
CHD1L-202ENST00000369258 HMGCRP04035 888 aa13.41□□□□□ -0.26
CHD1L-202ENST00000369258 RIPOR1Q6ZS17 1223 aa13.41□□□□□ -0.26
CHD1L-202ENST00000369258 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.41□□□□□ -0.26
CHD1L-202ENST00000369258 TTC13Q8NBP0 860 aa13.41□□□□□ -0.26
CHD1L-202ENST00000369258 ZFAND2BQ8WV99 257 aa13.41□□□□□ -0.26
CHD1L-202ENST00000369258 IFT43Q96FT9 208 aa13.41□□□□□ -0.26
CHD1L-202ENST00000369258 CGRRF1Q99675 332 aa13.41□□□□□ -0.26
CHD1L-202ENST00000369258 ZNF302Q9NR11 478 aa13.41□□□□□ -0.26
CHD1L-202ENST00000369258 XIRP2A4UGR9 3374 aa13.4□□□□□ -0.26
CHD1L-202ENST00000369258 MYOCOSA0A1B0GUC4 107 aa13.4□□□□□ -0.26
CHD1L-202ENST00000369258 KLHL33A6NCF5 533 aa13.4□□□□□ -0.26
CHD1L-202ENST00000369258 ARHGAP42A6NI28 874 aa13.4□□□□□ -0.26
CHD1L-202ENST00000369258 E7ESA3 106 aa13.4□□□□□ -0.26
CHD1L-202ENST00000369258 INO80B-WBP1J3KQ70 363 aa13.4□□□□□ -0.26
CHD1L-202ENST00000369258 C6orf222P0C671 652 aaPredicted RBP13.4□□□□□ -0.26
CHD1L-202ENST00000369258 DENND5BQ6ZUT9 1274 aa13.4□□□□□ -0.26
CHD1L-202ENST00000369258 RAPH1Q70E73 1250 aa13.4□□□□□ -0.26
CHD1L-202ENST00000369258 TMPRSS6Q8IU80 811 aa13.4□□□□□ -0.26
CHD1L-202ENST00000369258 GATA6Q92908 595 aa13.4□□□□□ -0.26
CHD1L-202ENST00000369258 OXCT2Q9BYC2 517 aaPredicted RBP13.4□□□□□ -0.26
CHD1L-202ENST00000369258 INO80BQ9C086 356 aaPredicted RBP13.4□□□□□ -0.26
CHD1L-202ENST00000369258 PHACTR1Q9C0D0 580 aa13.4□□□□□ -0.26
CHD1L-202ENST00000369258 MINDY3Q9H8M7 445 aa13.4□□□□□ -0.26
CHD1L-202ENST00000369258 TMPRSS4Q9NRS4 437 aa13.4□□□□□ -0.26
CHD1L-202ENST00000369258 PDP2Q9P2J9 529 aa13.4□□□□□ -0.26
CHD1L-202ENST00000369258 STRIP2Q9ULQ0 834 aa13.4□□□□□ -0.26
CHD1L-202ENST00000369258 USP18Q9UMW8 372 aa13.4□□□□□ -0.26
CHD1L-202ENST00000369258 H0YCG3 227 aa13.4□□□□□ -0.26
CHD1L-202ENST00000369258 WDR46O15213 610 aaKnown RBP13.4□□□□□ -0.26
CHD1L-202ENST00000369258 ASPAP45381 313 aa13.4□□□□□ -0.26
CHD1L-202ENST00000369258 RPL10AP62906 217 aaKnown RBP13.4□□□□□ -0.26
CHD1L-202ENST00000369258 PPM1JQ5JR12 505 aa13.4□□□□□ -0.26
CHD1L-202ENST00000369258 TCHHL1Q5QJ38 904 aaPredicted RBP13.4□□□□□ -0.26
CHD1L-202ENST00000369258 CNKSR2Q8WXI2 1034 aa13.4□□□□□ -0.26
CHD1L-202ENST00000369258 PGBD4Q96DM1 585 aa13.4□□□□□ -0.26
CHD1L-202ENST00000369258 TUBGCP5Q96RT8 1024 aa13.4□□□□□ -0.26
CHD1L-202ENST00000369258 GMLQ99445 158 aa13.4□□□□□ -0.26
CHD1L-202ENST00000369258 SYNJ2BP-COX16A0A087WUM0 186 aa13.39□□□□□ -0.27
CHD1L-202ENST00000369258 M0QYV0 167 aa13.39□□□□□ -0.27
CHD1L-202ENST00000369258 NFICP08651 508 aa13.39□□□□□ -0.27
CHD1L-202ENST00000369258 IQCF3P0C7M6 154 aa13.39□□□□□ -0.27
CHD1L-202ENST00000369258 RAP1GDS1P52306 607 aa13.39□□□□□ -0.27
CHD1L-202ENST00000369258 SLC18A2Q05940 514 aa13.39□□□□□ -0.27
CHD1L-202ENST00000369258 GJC2Q5T442 439 aaPredicted RBP13.39□□□□□ -0.27
CHD1L-202ENST00000369258 CASC4Q6P4E1 433 aa13.39□□□□□ -0.27
CHD1L-202ENST00000369258 SCUBE1Q8IWY4 988 aa13.39□□□□□ -0.27
CHD1L-202ENST00000369258 SLC44A1Q8WWI5 657 aa13.39□□□□□ -0.27
CHD1L-202ENST00000369258 MIS12Q9H081 205 aa13.39□□□□□ -0.27
CHD1L-202ENST00000369258 OCEL1Q9H607 264 aa13.39□□□□□ -0.27
CHD1L-202ENST00000369258 COX16Q9P0S2 106 aa13.39□□□□□ -0.27
CHD1L-202ENST00000369258 SLC7A8Q9UHI5 535 aa13.39□□□□□ -0.27
CHD1L-202ENST00000369258 PCDHGB4Q9UN71 923 aa13.39□□□□□ -0.27
CHD1L-202ENST00000369258 CNTN6Q9UQ52 1028 aa13.39□□□□□ -0.27
CHD1L-202ENST00000369258 PCDHGB5Q9Y5G0 923 aa13.39□□□□□ -0.27
CHD1L-202ENST00000369258 ANKRD33BA6NCL7 494 aa13.39□□□□□ -0.27
CHD1L-202ENST00000369258 MAGEC1O60732 1142 aa13.39□□□□□ -0.27
CHD1L-202ENST00000369258 SPATA31D3P0C874 917 aa13.39□□□□□ -0.27
CHD1L-202ENST00000369258 ZNF132P52740 706 aa13.39□□□□□ -0.27
CHD1L-202ENST00000369258 TAP1Q03518 808 aa13.39□□□□□ -0.27
CHD1L-202ENST00000369258 MTHFD1LQ6UB35 978 aa13.39□□□□□ -0.27
CHD1L-202ENST00000369258 SPATA31D4Q6ZUB0 917 aa13.39□□□□□ -0.27
CHD1L-202ENST00000369258 BBS12Q6ZW61 710 aa13.39□□□□□ -0.27
CHD1L-202ENST00000369258 NDUFAF2Q8N183 169 aa13.39□□□□□ -0.27
CHD1L-202ENST00000369258 NDRG1Q92597 394 aaKnown RBP13.39□□□□□ -0.27
CHD1L-202ENST00000369258 PCYT2Q99447 389 aa13.39□□□□□ -0.27
CHD1L-202ENST00000369258 UNKQ9C0B0 810 aaKnown RBP13.39□□□□□ -0.27
CHD1L-202ENST00000369258 PORCNQ9H237 461 aa13.39□□□□□ -0.27
CHD1L-202ENST00000369258 HMX2A2RU54 273 aa13.38□□□□□ -0.27
CHD1L-202ENST00000369258 SPECC1L-ADORA2AF8WAN1 911 aa13.38□□□□□ -0.27
CHD1L-202ENST00000369258 MCF2LO15068 1137 aa13.38□□□□□ -0.27
CHD1L-202ENST00000369258 ANPEPP15144 967 aa13.38□□□□□ -0.27
CHD1L-202ENST00000369258 HADHQ16836 314 aaKnown RBP13.38□□□□□ -0.27
CHD1L-202ENST00000369258 CFAP157Q5JU67 520 aa13.38□□□□□ -0.27
CHD1L-202ENST00000369258 C1orf146Q5VVC0 180 aa13.38□□□□□ -0.27
CHD1L-202ENST00000369258 SCUBE3Q8IX30 993 aa13.38□□□□□ -0.27
CHD1L-202ENST00000369258 ADAM32Q8TC27 787 aa13.38□□□□□ -0.27
CHD1L-202ENST00000369258 FAM49BQ9NUQ9 324 aa13.38□□□□□ -0.27
CHD1L-202ENST00000369258 NDE1Q9NXR1 346 aa13.38□□□□□ -0.27
CHD1L-202ENST00000369258 KCNK4Q9NYG8 393 aa13.38□□□□□ -0.27
CHD1L-202ENST00000369258 ZC3H7BQ9UGR2 993 aaKnown RBP13.38□□□□□ -0.27
CHD1L-202ENST00000369258 GINS2Q9Y248 185 aa13.38□□□□□ -0.27
CHD1L-202ENST00000369258 MGAMO43451 1857 aa13.38□□□□□ -0.27
CHD1L-202ENST00000369258 EVPLQ92817 2033 aa13.38□□□□□ -0.27
CHD1L-202ENST00000369258 F8W8V4 182 aa13.38□□□□□ -0.27
CHD1L-202ENST00000369258 ADCY6O43306 1168 aa13.38□□□□□ -0.27
CHD1L-202ENST00000369258 RTN3O95197 1032 aaPredicted RBP13.38□□□□□ -0.27
CHD1L-202ENST00000369258 METTL18O95568 372 aa13.38□□□□□ -0.27
CHD1L-202ENST00000369258 LSM8O95777 96 aaKnown RBP13.38□□□□□ -0.27
CHD1L-202ENST00000369258 OATP04181 439 aa13.38□□□□□ -0.27
CHD1L-202ENST00000369258 ITGB3P05106 788 aa13.38□□□□□ -0.27
CHD1L-202ENST00000369258 KRT7P08729 469 aa13.38□□□□□ -0.27
CHD1L-202ENST00000369258 SUPT20HL2P0C7V6 817 aa13.38□□□□□ -0.27
CHD1L-202ENST00000369258 TSHRP16473 764 aa13.38□□□□□ -0.27
CHD1L-202ENST00000369258 HSPA1LP34931 641 aa13.38□□□□□ -0.27
CHD1L-202ENST00000369258 CLCN3P51790 818 aa13.38□□□□□ -0.27
CHD1L-202ENST00000369258 YWHAZP63104 245 aaKnown RBP13.38□□□□□ -0.27
CHD1L-202ENST00000369258 PDE1BQ01064 536 aa13.38□□□□□ -0.27
CHD1L-202ENST00000369258 GSTA3Q16772 222 aa13.38□□□□□ -0.27
CHD1L-202ENST00000369258 SUPT20HL1Q3ZLR7 823 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms