RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 BMT2Q1RMZ1 405 aa6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 COL28A1Q2UY09 1125 aa6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 CCDC40Q4G0X9 1142 aa6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 SPDYCQ5MJ68 293 aa6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 CCDC181Q5TID7 509 aa6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 EMC10Q5UCC4 262 aa6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 RTN4RL1Q86UN2 441 aaPredicted RBP6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 SERINC5Q86VE9 423 aa6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 CREG2Q8IUH2 290 aa6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 TRIM59Q8IWR1 403 aa6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 ADGRF4Q8IZF3 695 aa6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 SYCE1Q8N0S2 351 aa6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 MREGQ8N565 214 aa6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 SAMD3Q8N6K7 520 aa6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 FAM181AQ8N9Y4 354 aa6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 PRPF38AQ8NAV1 312 aaKnown RBP6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 GMCL1P1Q8NEA9 526 aa6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 TMEM174Q8WUU8 243 aa6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 AFG1LQ8WV93 481 aa6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 PPP2R3CQ969Q6 453 aa6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 DNAJC19Q96DA6 116 aa6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 RHOXF2Q9BQY4 288 aa6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 TRIT1Q9H3H1 467 aaKnown RBP6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 MMRN2Q9H8L6 949 aa6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 JMJD4Q9H9V9 463 aa6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 PDE11AQ9HCR9 933 aa6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 KCNMB3Q9NPA1 279 aa6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 ARHGAP20Q9P2F6 1191 aa6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 SEL1LQ9UBV2 794 aa6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 FBXL21Q9UKT6 434 aa6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 SIT1Q9Y3P8 196 aa6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 RWDD3Q9Y3V2 267 aa6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 POLQO75417 2590 aa6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 NF1P21359 2839 aa6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 BOD1L1Q8NFC6 3051 aa6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 PP2D1A8MPX8 630 aa6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 CCDC188H7C350 402 aa6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 EIF3DO15371 548 aaKnown RBP eCLIP6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 TBC1D4O60343 1298 aa6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 KPNA6O60684 536 aa6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 NDUFB10O96000 172 aa6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 GOLGA8HP0CJ92 632 aa6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 HOXB8P17481 243 aaPredicted RBP6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 ITIH2P19823 946 aa6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 THPOP40225 353 aa6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 PRKCIP41743 596 aa6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 HNRNPH2P55795 449 aaKnown RBP6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 SNRPFP62306 86 aaKnown RBP6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 NAB2Q15742 525 aa6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 CCDC62Q6P9F0 684 aa6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 BTNL9Q6UXG8 535 aa6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 RRAGAQ7L523 313 aa6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 CD302Q8IX05 232 aa6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 FAM169BQ8N8A8 192 aa6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 SYT2Q8N9I0 419 aaPredicted RBP6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 TDRD5Q8NAT2 981 aaKnown RBP6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 NOA1Q8NC60 698 aaKnown RBP6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 SPATA4Q8NEY3 305 aa6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 PJA1Q8NG27 643 aa6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 AENQ8WTP8 325 aaKnown RBP6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 SEPT8Q92599 483 aa6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 HRASLS5Q96KN8 279 aa6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 OSBPL9Q96SU4 736 aa6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 MMS19Q96T76 1030 aa6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 POLR3CQ9BUI4 534 aaPredicted RBP6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 SELENOOQ9BVL4 669 aa6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 LSM14BQ9BX40 385 aaKnown RBP6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 AMNQ9BXJ7 453 aa6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 MKRN2Q9H000 416 aaKnown RBP6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 TNKS2Q9H2K2 1166 aa6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 SLC39A2Q9NP94 309 aa6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 CYP26B1Q9NR63 512 aa6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 RNF146Q9NTX7 359 aa6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 ZSCAN32Q9NX65 697 aa6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 VPS18Q9P253 973 aa6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 FBXO40Q9UH90 709 aa6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 FBXO4Q9UKT5 387 aa6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 VAV3Q9UKW4 847 aa6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 PNMA2Q9UL42 364 aa6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 HPCAL4Q9UM19 191 aa6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 DNM3Q9UQ16 869 aa6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 CAPN6Q9Y6Q1 641 aa6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 EMSYQ7Z589 1322 aa6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 F5P12259 2224 aa6.92□□□□□ -1.3
ECHDC1-202ENST00000368289 GOLGA6BA6NDN3 693 aa6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 LRRC53A6NM62 1247 aa6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 PLA2G6O60733 806 aa6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 SHOX2O60902 331 aaPredicted RBP6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 HSF2BPO75031 334 aa6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 PPFIA4O75335 1185 aa6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 PLA2G4BP0C869 781 aa6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 HOXC8P31273 242 aa6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 LMAN1P49257 510 aa6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 LIMK1P53667 647 aa6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 SNAP25P60880 206 aa6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 TNNC1P63316 161 aa6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 PRKCQQ04759 706 aa6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 ARHGAP1Q07960 439 aa6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 ADAM9Q13443 819 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms