RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 VCX3BQ9H321 246 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 RSAD1Q9HA92 442 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 VCX3AQ9NNX9 186 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 SSU72Q9NP77 194 aaKnown RBP8.49□□□□□ -1.05
CD46-208ENST00000367042 SOX13Q9UN79 622 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 PLLPQ9Y342 182 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 TM7SF2O76062 418 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 HMGCRP04035 888 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 ERBB2P04626 1255 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 EDN1P05305 212 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 EIF4BP23588 611 aaKnown RBP8.49□□□□□ -1.05
CD46-208ENST00000367042 STIP1P31948 543 aaKnown RBP8.49□□□□□ -1.05
CD46-208ENST00000367042 NAMPTP43490 491 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 RTP1P59025 263 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 TGFB2P61812 414 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 IGBP1P78318 339 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 SLC25A11Q02978 314 aaKnown RBP8.49□□□□□ -1.05
CD46-208ENST00000367042 CDC16Q13042 620 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 KRT72Q14CN4 511 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 FASTKD1Q53R41 847 aaKnown RBP8.49□□□□□ -1.05
CD46-208ENST00000367042 EFHC1Q5JVL4 640 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 VWA5B1Q5TIE3 1220 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 ZBTB8OSQ8IWT0 167 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 UNC5BQ8IZJ1 945 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 GPRASP2Q96D09 838 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 SIGLEC16A6NMB1 481 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 PEX10O60683 326 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 TRPA1O75762 1119 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 TGDSO95455 350 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 GJB1P08034 283 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 SUPT20HL2P0C7V6 817 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 CSH1P0DML2 217 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 CSH2P0DML3 217 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 ATP6V1B1P15313 513 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 KCNA2P16389 499 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 ETV4P43268 484 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 YWHAZP63104 245 aaKnown RBP8.48□□□□□ -1.05
CD46-208ENST00000367042 CAPSQ13938 189 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 SUPT20HL1Q3ZLR7 823 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 ZC3H12AQ5D1E8 599 aaKnown RBP8.48□□□□□ -1.05
CD46-208ENST00000367042 FOXB2Q5VYV0 432 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 NET1Q7Z628 596 aaPredicted RBP8.48□□□□□ -1.05
CD46-208ENST00000367042 CHSY1Q86X52 802 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 DEFB107AQ8IZN7 70 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 ARFGAP1Q8N6T3 406 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 RXFP2Q8WXD0 754 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 LPAR1Q92633 364 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 CLMNQ96JQ2 1002 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 MRPL4Q9BYD3 311 aaKnown RBP8.48□□□□□ -1.05
CD46-208ENST00000367042 MMADHCQ9H3L0 296 aaPredicted RBP8.48□□□□□ -1.05
CD46-208ENST00000367042 ACSS2Q9NR19 701 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 MAN1C1Q9NR34 630 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 PAK5Q9P286 719 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 CYTH4Q9UIA0 394 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 KCNG1Q9UIX4 513 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 SYNPO2Q9UMS6 1093 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 E9PBE3 544 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 VWA5AO00534 786 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 NEMP1O14524 444 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 APOL1O14791 398 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 KLHL41O60662 606 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 PRKCBP05771 671 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 F7P08709 466 aaPredicted RBP8.48□□□□□ -1.05
CD46-208ENST00000367042 DESP17661 470 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 MSX2P35548 267 aaPredicted RBP8.48□□□□□ -1.05
CD46-208ENST00000367042 COPAP53621 1224 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 SPDYE2Q495Y8 402 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 ZNF772Q68DY9 489 aaPredicted RBP8.48□□□□□ -1.05
CD46-208ENST00000367042 CES3Q6UWW8 571 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 BRSK2Q8IWQ3 736 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 ZNF276Q8N554 614 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 STKLD1Q8NE28 680 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 OR6Y1Q8NGX8 325 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 B4GALNT2Q8NHY0 566 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 MZB1Q8WU39 189 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 CDHR1Q96JP9 859 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 TRAPPC9Q96Q05 1148 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 GCNAQ96QF7 691 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 ZNF518BQ9C0D4 1074 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 PORCNQ9H237 461 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 CLIC5Q9NZA1 410 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 GINS2Q9Y248 185 aa8.48□□□□□ -1.05
CD46-208ENST00000367042 ZNFX1Q9P2E3 1918 aaKnown RBP8.48□□□□□ -1.05
CD46-208ENST00000367042 DNAJC6O75061 913 aa8.47□□□□□ -1.05
CD46-208ENST00000367042 DGKIO75912 1065 aa8.47□□□□□ -1.05
CD46-208ENST00000367042 ITGB3P05106 788 aa8.47□□□□□ -1.05
CD46-208ENST00000367042 CXCL8P10145 99 aa8.47□□□□□ -1.05
CD46-208ENST00000367042 PEX2P28328 305 aa8.47□□□□□ -1.05
CD46-208ENST00000367042 GMPRP36959 345 aa8.47□□□□□ -1.05
CD46-208ENST00000367042 GRIA1P42261 906 aa8.47□□□□□ -1.05
CD46-208ENST00000367042 BTKQ06187 659 aa8.47□□□□□ -1.05
CD46-208ENST00000367042 N4BP2L1Q5TBK1 243 aaPredicted RBP8.47□□□□□ -1.05
CD46-208ENST00000367042 TRIM50Q86XT4 487 aa8.47□□□□□ -1.05
CD46-208ENST00000367042 WDR49Q8IV35 697 aa8.47□□□□□ -1.05
CD46-208ENST00000367042 MPP5Q8N3R9 675 aa8.47□□□□□ -1.05
CD46-208ENST00000367042 RNF148Q8N7C7 305 aa8.47□□□□□ -1.05
CD46-208ENST00000367042 C7orf31Q8N865 590 aa8.47□□□□□ -1.05
CD46-208ENST00000367042 RDM1Q8NG50 284 aa8.47□□□□□ -1.05
CD46-208ENST00000367042 GDPD5Q8WTR4 605 aa8.47□□□□□ -1.05
CD46-208ENST00000367042 PGBD4Q96DM1 585 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms