RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 GCNT1Q02742 428 aa14.38□□□□□ -0.11
SMC5-201ENST00000361138 EFL1Q7Z2Z2 1120 aaKnown RBP14.38□□□□□ -0.11
SMC5-201ENST00000361138 TRABD2AQ86V40 505 aa14.38□□□□□ -0.11
SMC5-201ENST00000361138 SNX32Q86XE0 403 aa14.38□□□□□ -0.11
SMC5-201ENST00000361138 CCDC33Q8N5R6 958 aa14.38□□□□□ -0.11
SMC5-201ENST00000361138 IPMKQ8NFU5 416 aa14.38□□□□□ -0.11
SMC5-201ENST00000361138 NAT9Q9BTE0 207 aa14.38□□□□□ -0.11
SMC5-201ENST00000361138 CCDC28BQ9BUN5 200 aa14.38□□□□□ -0.11
SMC5-201ENST00000361138 MTMR12Q9C0I1 747 aa14.38□□□□□ -0.11
SMC5-201ENST00000361138 ITGB1BP2Q9UKP3 347 aa14.38□□□□□ -0.11
SMC5-201ENST00000361138 SLITRK3O94933 977 aa14.38□□□□□ -0.11
SMC5-201ENST00000361138 VPS72Q15906 364 aa14.38□□□□□ -0.11
SMC5-201ENST00000361138 RBM46Q8TBY0 533 aaKnown RBP14.38□□□□□ -0.11
SMC5-201ENST00000361138 SLITRK1Q96PX8 696 aa14.38□□□□□ -0.11
SMC5-201ENST00000361138 RIC8BQ9NVN3 520 aa14.38□□□□□ -0.11
SMC5-201ENST00000361138 RABGEF1Q9UJ41 708 aa14.38□□□□□ -0.11
SMC5-201ENST00000361138 DMTF1Q9Y222 760 aa14.38□□□□□ -0.11
SMC5-201ENST00000361138 NR5A2O00482 541 aa14.38□□□□□ -0.11
SMC5-201ENST00000361138 GSC2O15499 205 aa14.38□□□□□ -0.11
SMC5-201ENST00000361138 MTSS1O43312 755 aa14.38□□□□□ -0.11
SMC5-201ENST00000361138 FASP25445 335 aa14.38□□□□□ -0.11
SMC5-201ENST00000361138 NR1H2P55055 460 aa14.38□□□□□ -0.11
SMC5-201ENST00000361138 DLG4P78352 724 aa14.38□□□□□ -0.11
SMC5-201ENST00000361138 ORC1Q13415 861 aa14.38□□□□□ -0.11
SMC5-201ENST00000361138 BAATQ14032 418 aaPredicted RBP14.38□□□□□ -0.11
SMC5-201ENST00000361138 DHFR2Q86XF0 187 aa14.38□□□□□ -0.11
SMC5-201ENST00000361138 A0A087WXM4 84 aa14.37□□□□□ -0.11
SMC5-201ENST00000361138 WDR27A2RRH5 827 aa14.37□□□□□ -0.11
SMC5-201ENST00000361138 PRPF4O43172 522 aaKnown RBP eCLIP14.37□□□□□ -0.11
SMC5-201ENST00000361138 MOCS2O96007 188 aaPredicted RBP14.37□□□□□ -0.11
SMC5-201ENST00000361138 VEGFAP15692 232 aaPredicted RBP14.37□□□□□ -0.11
SMC5-201ENST00000361138 MGAT5Q09328 741 aa14.37□□□□□ -0.11
SMC5-201ENST00000361138 ZNF268Q14587 947 aaPredicted RBP14.37□□□□□ -0.11
SMC5-201ENST00000361138 SLC5A9Q2M3M2 681 aa14.37□□□□□ -0.11
SMC5-201ENST00000361138 SEZ6Q53EL9 994 aa14.37□□□□□ -0.11
SMC5-201ENST00000361138 RINLQ6ZS11 566 aa14.37□□□□□ -0.11
SMC5-201ENST00000361138 TAS2R42Q7RTR8 314 aa14.37□□□□□ -0.11
SMC5-201ENST00000361138 TRIM62Q9BVG3 475 aa14.37□□□□□ -0.11
SMC5-201ENST00000361138 ZCWPW1Q9H0M4 648 aa14.37□□□□□ -0.11
SMC5-201ENST00000361138 NFIBO00712 420 aa14.37□□□□□ -0.11
SMC5-201ENST00000361138 SERPINA6P08185 405 aa14.37□□□□□ -0.11
SMC5-201ENST00000361138 DPYSL3Q14195 570 aa14.37□□□□□ -0.11
SMC5-201ENST00000361138 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.37□□□□□ -0.11
SMC5-201ENST00000361138 ZNF554Q86TJ5 538 aa14.37□□□□□ -0.11
SMC5-201ENST00000361138 KLHL23Q8NBE8 558 aa14.37□□□□□ -0.11
SMC5-201ENST00000361138 APPL2Q8NEU8 664 aa14.37□□□□□ -0.11
SMC5-201ENST00000361138 TSPAN14Q8NG11 270 aa14.37□□□□□ -0.11
SMC5-201ENST00000361138 ZSCAN18Q8TBC5 510 aaPredicted RBP14.37□□□□□ -0.11
SMC5-201ENST00000361138 AGBL1Q96MI9 1066 aa14.37□□□□□ -0.11
SMC5-201ENST00000361138 PLGRKTQ9HBL7 147 aa14.37□□□□□ -0.11
SMC5-201ENST00000361138 RRN3Q9NYV6 651 aa14.37□□□□□ -0.11
SMC5-201ENST00000361138 FAM86B1E9PN63 330 aa14.37□□□□□ -0.11
SMC5-201ENST00000361138 FAM86B2P0C5J1 330 aa14.37□□□□□ -0.11
SMC5-201ENST00000361138 UQCRBP14927 111 aa14.37□□□□□ -0.11
SMC5-201ENST00000361138 NME5P56597 212 aa14.37□□□□□ -0.11
SMC5-201ENST00000361138 KRT72Q14CN4 511 aa14.37□□□□□ -0.11
SMC5-201ENST00000361138 SYBUQ9NX95 663 aa14.37□□□□□ -0.11
SMC5-201ENST00000361138 NOL4O94818 638 aa14.37□□□□□ -0.11
SMC5-201ENST00000361138 DGKDQ16760 1214 aa14.37□□□□□ -0.11
SMC5-201ENST00000361138 DENND1BQ6P3S1 775 aa14.37□□□□□ -0.11
SMC5-201ENST00000361138 FAM172AQ8WUF8 416 aa14.37□□□□□ -0.11
SMC5-201ENST00000361138 TMEM109Q9BVC6 243 aa14.37□□□□□ -0.11
SMC5-201ENST00000361138 GPAMQ9HCL2 828 aa14.37□□□□□ -0.11
SMC5-201ENST00000361138 COPG2Q9UBF2 871 aa14.37□□□□□ -0.11
SMC5-201ENST00000361138 DRG1Q9Y295 367 aaKnown RBP14.37□□□□□ -0.11
SMC5-201ENST00000361138 TMEM247A6NEH6 219 aa14.37□□□□□ -0.11
SMC5-201ENST00000361138 CLASP2O75122 1294 aaKnown RBP14.37□□□□□ -0.11
SMC5-201ENST00000361138 BANF1O75531 89 aa14.37□□□□□ -0.11
SMC5-201ENST00000361138 GH1P01241 217 aa14.37□□□□□ -0.11
SMC5-201ENST00000361138 PGAM1P18669 254 aa14.37□□□□□ -0.11
SMC5-201ENST00000361138 PRKAA1Q13131 559 aa14.37□□□□□ -0.11
SMC5-201ENST00000361138 ANO4Q32M45 955 aa14.37□□□□□ -0.11
SMC5-201ENST00000361138 SUPT20HL1Q3ZLR7 823 aa14.37□□□□□ -0.11
SMC5-201ENST00000361138 AGKQ53H12 422 aa14.37□□□□□ -0.11
SMC5-201ENST00000361138 SMIM5Q71RC9 77 aa14.37□□□□□ -0.11
SMC5-201ENST00000361138 PDCD6IPQ8WUM4 868 aaKnown RBP14.37□□□□□ -0.11
SMC5-201ENST00000361138 CYLDQ9NQC7 956 aa14.37□□□□□ -0.11
SMC5-201ENST00000361138 RSL24D1Q9UHA3 163 aaKnown RBP14.37□□□□□ -0.11
SMC5-201ENST00000361138 UBDO15205 165 aa14.36□□□□□ -0.11
SMC5-201ENST00000361138 NR3C2P08235 984 aa14.36□□□□□ -0.11
SMC5-201ENST00000361138 VAV1P15498 845 aa14.36□□□□□ -0.11
SMC5-201ENST00000361138 TSHRP16473 764 aa14.36□□□□□ -0.11
SMC5-201ENST00000361138 RAP1GAPP47736 663 aa14.36□□□□□ -0.11
SMC5-201ENST00000361138 ARPP19P56211 112 aa14.36□□□□□ -0.11
SMC5-201ENST00000361138 PPATQ06203 517 aa14.36□□□□□ -0.11
SMC5-201ENST00000361138 NEDD8Q15843 81 aa14.36□□□□□ -0.11
SMC5-201ENST00000361138 EMC1Q8N766 993 aa14.36□□□□□ -0.11
SMC5-201ENST00000361138 GMCL1P1Q8NEA9 526 aa14.36□□□□□ -0.11
SMC5-201ENST00000361138 RBBP8Q99708 897 aa14.36□□□□□ -0.11
SMC5-201ENST00000361138 KCTD14Q9BQ13 255 aaPredicted RBP14.36□□□□□ -0.11
SMC5-201ENST00000361138 CAB39Q9Y376 341 aaPredicted RBP14.36□□□□□ -0.11
SMC5-201ENST00000361138 FSCN2O14926 492 aa14.36□□□□□ -0.11
SMC5-201ENST00000361138 ENTPD3O75355 529 aa14.36□□□□□ -0.11
SMC5-201ENST00000361138 ITGB3P05106 788 aa14.36□□□□□ -0.11
SMC5-201ENST00000361138 PCSK7Q16549 785 aa14.36□□□□□ -0.11
SMC5-201ENST00000361138 KIZQ2M2Z5 673 aa14.36□□□□□ -0.11
SMC5-201ENST00000361138 LRRC57Q8N9N7 239 aa14.36□□□□□ -0.11
SMC5-201ENST00000361138 LINC00116Q8NCU8 138 aa14.36□□□□□ -0.11
SMC5-201ENST00000361138 HPDLQ96IR7 371 aa14.36□□□□□ -0.11
SMC5-201ENST00000361138 CPNE1Q99829 537 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms