RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 FEN1P39748 380 aaKnown RBP13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 HLFQ16534 295 aa13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 N4BP2L1Q5TBK1 243 aaPredicted RBP13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 TMEM143Q96AN5 459 aa13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 NIF3L1Q9GZT8 377 aa13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 POLR1BQ9H9Y6 1135 aa13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 CFAP74Q9C0B2 1584 aa13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 REREQ9P2R6 1566 aa13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 MT-CO1P00395 513 aa13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 AKR1D1P51857 326 aa13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 ITGA1P56199 1179 aa13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 DCAF6Q58WW2 860 aa13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 SNX32Q86XE0 403 aa13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 MTMR8Q96EF0 704 aa13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 NDNQ99608 321 aa13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 LRRC40Q9H9A6 602 aa13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 RGS18Q9NS28 235 aa13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 GGA2Q9UJY4 613 aa13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 SNX3O60493 162 aa13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 MAP3K6O95382 1288 aa13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 RPL21P46778 160 aaKnown RBP13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 CSE1LP55060 971 aaKnown RBP13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 ITGA9Q13797 1035 aa13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 PTPAQ15257 358 aa13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 GSTA3Q16772 222 aa13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 SLC44A2Q8IWA5 706 aaPredicted RBP13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 POC5Q8NA72 575 aa13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 FLAD1Q8NFF5 587 aa13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 NAT9Q9BTE0 207 aa13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 NT5C1AQ9BXI3 368 aa13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 UBE2OQ9C0C9 1292 aaKnown RBP13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 NUAK2Q9H093 628 aa13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 CATSPERBQ9H7T0 1116 aa13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 GMEB1Q9Y692 573 aa13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 PMPCBO75439 489 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 PDGFRBP09619 1106 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 GRIK1P39086 918 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 CNTN1Q12860 1018 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 TMEM132DQ14C87 1099 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 SHROOM1Q2M3G4 852 aaPredicted RBP13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 PGS1Q32NB8 556 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 PPP1R14BQ96C90 147 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 RNF145Q96MT1 663 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 ZNF624Q9P2J8 865 aaPredicted RBP13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 UBA2Q9UBT2 640 aaPredicted RBP13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 MINPP1Q9UNW1 487 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 ACOT9Q9Y305 439 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 EFCAB10A6NFE3 127 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 ATP5BP06576 529 aaKnown RBP13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 FGFR3P22607 806 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 FXR2P51116 673 aaKnown RBP eCLIP13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 DGCR6Q14129 220 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 CDKAL1Q5VV42 579 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 ZNF571Q7Z3V5 609 aaPredicted RBP13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 ABCB10Q9NRK6 738 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 MRASO14807 208 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 ASMTLO95671 621 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 CHI3L1P36222 383 aaPredicted RBP13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 ACADSBP45954 432 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 GSSP48637 474 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 HK2P52789 917 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 PRKAA1Q13131 559 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 UTS2BQ765I0 119 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 CYP4Z1Q86W10 505 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 DLG3Q92796 817 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 KIAA1683Q9H0B3 1180 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 LRMDAQ9H2I8 198 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 RIBC2Q9H4K1 309 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 JPH1Q9HDC5 661 aaPredicted RBP13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 NINJ2Q9NZG7 142 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 LMTK3Q96Q04 1460 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 KRT36O76013 467 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 GSTM1P09488 218 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 MAPK1P28482 360 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 MZF1P28698 734 aaPredicted RBP13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 SNRPFP62306 86 aaKnown RBP13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 GOLGA7BQ2TAP0 167 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 GLRA4Q5JXX5 417 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 TTI2Q6NXR4 508 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 NET1Q7Z628 596 aaPredicted RBP13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 OR7A2PQ8NGA2 310 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 TAF6LQ9Y6J9 622 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 MED14O60244 1454 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 DCXO43602 365 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 PUDPQ08623 228 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 CDC16Q13042 620 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 DDX39BQ13838 428 aaKnown RBP13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 FASTKQ14296 549 aaKnown RBP13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 C2CD6Q53TS8 623 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 SLC45A4Q5BKX6 768 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 FAM228AQ86W67 206 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 EPHX4Q8IUS5 362 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 DPP10Q8N608 796 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 BHLHE22Q8NFJ8 381 aaPredicted RBP13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 DDX50Q9BQ39 737 aaKnown RBP13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 PRRG3Q9BZD7 231 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 RSL24D1Q9UHA3 163 aaKnown RBP13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 HPSEQ9Y251 543 aa13.8□□□□□ -0.2
CCDC144A-203ENST00000360495 ATP7AQ04656 1500 aa13.79□□□□□ -0.2
CCDC144A-203ENST00000360495 ENTPD5O75356 428 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms