RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 BZW1Q7L1Q6 419 aaKnown RBP13.19□□□□□ -0.3
GGPS1-202ENST00000358966 GSTA5Q7RTV2 222 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 RCOR2Q8IZ40 523 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 RTP3Q9BQQ7 232 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 SYT15Q9BQS2 421 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.19□□□□□ -0.3
GGPS1-202ENST00000358966 VIPAS39Q9H9C1 493 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 SLC38A7Q9NVC3 462 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 DNAJB4Q9UDY4 337 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 RASAL2Q9UJF2 1139 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 PRG3Q9Y2Y8 225 aaPredicted RBP13.19□□□□□ -0.3
GGPS1-202ENST00000358966 GOLGA6CA6NDK9 693 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 GABRDO14764 452 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 DDHD2O94830 711 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 IFNB1P01574 187 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 FESP07332 822 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 OR4Q2P0C623 313 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 GOLGA6DP0CG33 693 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 WARSP23381 471 aaKnown RBP13.19□□□□□ -0.3
GGPS1-202ENST00000358966 KDELR1P24390 212 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 CDC25CP30307 473 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 CHKAP35790 457 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 GDF10P55107 478 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 CDH6P55285 790 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 HDAC4P56524 1084 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 TTMPQ5BVD1 217 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 PPP6R3Q5H9R7 873 aaPredicted RBP13.19□□□□□ -0.3
GGPS1-202ENST00000358966 CWF19L1Q69YN2 538 aaKnown RBP13.19□□□□□ -0.3
GGPS1-202ENST00000358966 HACE1Q8IYU2 909 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 TTC39CQ8N584 583 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 TOP6BLQ8N6T0 577 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 MAGEC3Q8TD91 643 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 FNIP1Q8TF40 1166 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 SCLYQ96I15 445 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 RBM41Q96IZ5 413 aaKnown RBP13.19□□□□□ -0.3
GGPS1-202ENST00000358966 B3GALT6Q96L58 329 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 CFHR5Q9BXR6 569 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 FAM114A2Q9NRY5 505 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 TMLHEQ9NVH6 421 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 GOLGA6AQ9NYA3 693 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 ZNF148Q9UQR1 794 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 UNC80Q8N2C7 3258 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 FAM187AA6NFU0 413 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 MOXD2PA6NHM9 499 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 AHCYL1O43865 530 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 HSF2BPO75031 334 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 IFRD2Q12894 506 aaPredicted RBP13.19□□□□□ -0.3
GGPS1-202ENST00000358966 GPNMBQ14956 572 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 MRPL10Q7Z7H8 261 aaKnown RBP13.19□□□□□ -0.3
GGPS1-202ENST00000358966 IQCKQ8N0W5 287 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 ACTL9Q8TC94 416 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 TNIP3Q96KP6 325 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 CNPY3Q9BT09 278 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 ZCWPW1Q9H0M4 648 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.19□□□□□ -0.3
GGPS1-202ENST00000358966 NRP1O14786 923 aa13.18□□□□□ -0.3
GGPS1-202ENST00000358966 LIASO43766 372 aa13.18□□□□□ -0.3
GGPS1-202ENST00000358966 NBNO60934 754 aa13.18□□□□□ -0.3
GGPS1-202ENST00000358966 SHBGP04278 402 aa13.18□□□□□ -0.3
GGPS1-202ENST00000358966 IVDP26440 423 aa13.18□□□□□ -0.3
GGPS1-202ENST00000358966 SDC4P31431 198 aa13.18□□□□□ -0.3
GGPS1-202ENST00000358966 HSPA9P38646 679 aaKnown RBP13.18□□□□□ -0.3
GGPS1-202ENST00000358966 OTUD4Q01804 1114 aaKnown RBP13.18□□□□□ -0.3
GGPS1-202ENST00000358966 HP1BP3Q5SSJ5 553 aaPredicted RBP13.18□□□□□ -0.3
GGPS1-202ENST00000358966 FAM131BQ86XD5 332 aa13.18□□□□□ -0.3
GGPS1-202ENST00000358966 RFX6Q8HWS3 928 aa13.18□□□□□ -0.3
GGPS1-202ENST00000358966 PYROXD2Q8N2H3 581 aa13.18□□□□□ -0.3
GGPS1-202ENST00000358966 SLAIN1Q8ND83 568 aa13.18□□□□□ -0.3
GGPS1-202ENST00000358966 OR10T2Q8NGX3 314 aa13.18□□□□□ -0.3
GGPS1-202ENST00000358966 FAM81AQ8TBF8 368 aa13.18□□□□□ -0.3
GGPS1-202ENST00000358966 SEMA4AQ9H3S1 761 aa13.18□□□□□ -0.3
GGPS1-202ENST00000358966 MRPL42Q9Y6G3 142 aaKnown RBP13.18□□□□□ -0.3
GGPS1-202ENST00000358966 SMIM23A6NLE4 172 aa13.18□□□□□ -0.3
GGPS1-202ENST00000358966 ZNF623O75123 536 aa13.18□□□□□ -0.3
GGPS1-202ENST00000358966 NPR3P17342 541 aa13.18□□□□□ -0.3
GGPS1-202ENST00000358966 SLC8A1P32418 973 aa13.18□□□□□ -0.3
GGPS1-202ENST00000358966 ADCY8P40145 1251 aa13.18□□□□□ -0.3
GGPS1-202ENST00000358966 PAPOLAP51003 745 aaKnown RBP13.18□□□□□ -0.3
GGPS1-202ENST00000358966 ITGA8P53708 1063 aa13.18□□□□□ -0.3
GGPS1-202ENST00000358966 BYSLQ13895 437 aaKnown RBP13.18□□□□□ -0.3
GGPS1-202ENST00000358966 STILQ15468 1287 aa13.18□□□□□ -0.3
GGPS1-202ENST00000358966 HADHQ16836 314 aaKnown RBP13.18□□□□□ -0.3
GGPS1-202ENST00000358966 LRRC38Q5VT99 294 aa13.18□□□□□ -0.3
GGPS1-202ENST00000358966 SYPL2Q5VXT5 272 aa13.18□□□□□ -0.3
GGPS1-202ENST00000358966 ZNF598Q86UK7 904 aaKnown RBP13.18□□□□□ -0.3
GGPS1-202ENST00000358966 LRRTM3Q86VH5 581 aa13.18□□□□□ -0.3
GGPS1-202ENST00000358966 ZC3H18Q86VM9 953 aaKnown RBP13.18□□□□□ -0.3
GGPS1-202ENST00000358966 CCDC185Q8N715 623 aa13.18□□□□□ -0.3
GGPS1-202ENST00000358966 ZMIZ2Q8NF64 920 aa13.18□□□□□ -0.3
GGPS1-202ENST00000358966 DBF4BQ8NFT6 615 aa13.18□□□□□ -0.3
GGPS1-202ENST00000358966 RUFY1Q96T51 708 aa13.18□□□□□ -0.3
GGPS1-202ENST00000358966 SMOQ99835 787 aa13.18□□□□□ -0.3
GGPS1-202ENST00000358966 EPB41L4BQ9H329 900 aa13.18□□□□□ -0.3
GGPS1-202ENST00000358966 ASNSD1Q9NWL6 643 aa13.18□□□□□ -0.3
GGPS1-202ENST00000358966 MFHAS1Q9Y4C4 1052 aa13.18□□□□□ -0.3
GGPS1-202ENST00000358966 NR2E3Q9Y5X4 410 aa13.18□□□□□ -0.3
GGPS1-202ENST00000358966 ARVCFO00192 962 aa13.17□□□□□ -0.3
GGPS1-202ENST00000358966 PRPSAP2O60256 369 aa13.17□□□□□ -0.3
GGPS1-202ENST00000358966 SMNDC1O75940 238 aaKnown RBP eCLIP13.17□□□□□ -0.3
GGPS1-202ENST00000358966 CABYRO75952 493 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms