RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 HK2P52789 917 aa9.03□□□□□ -0.96
COL6A6-201ENST00000358511 ANTXR2P58335 489 aa9.03□□□□□ -0.96
COL6A6-201ENST00000358511 SNAP25P60880 206 aa9.03□□□□□ -0.96
COL6A6-201ENST00000358511 LRRC74AQ0VAA2 488 aa9.03□□□□□ -0.96
COL6A6-201ENST00000358511 ENTPD7Q9NQZ7 604 aa9.03□□□□□ -0.96
COL6A6-201ENST00000358511 NRXN1Q9ULB1 1477 aa9.03□□□□□ -0.96
COL6A6-201ENST00000358511 CCNA2P20248 432 aa9.03□□□□□ -0.96
COL6A6-201ENST00000358511 NUP62P37198 522 aaPredicted RBP9.03□□□□□ -0.96
COL6A6-201ENST00000358511 FUT11Q495W5 492 aa9.03□□□□□ -0.96
COL6A6-201ENST00000358511 GALNTL6Q49A17 601 aa9.03□□□□□ -0.96
COL6A6-201ENST00000358511 C11orf88Q6PI97 169 aa9.03□□□□□ -0.96
COL6A6-201ENST00000358511 FAM9CQ8IZT9 166 aa9.03□□□□□ -0.96
COL6A6-201ENST00000358511 DCLK3Q9C098 648 aa9.03□□□□□ -0.96
COL6A6-201ENST00000358511 PNMA3Q9UL41 463 aa9.03□□□□□ -0.96
COL6A6-201ENST00000358511 SHPRHQ149N8 1683 aa9.03□□□□□ -0.96
COL6A6-201ENST00000358511 NPTXRO95502 500 aa9.03□□□□□ -0.96
COL6A6-201ENST00000358511 CYP11B1P15538 503 aa9.03□□□□□ -0.96
COL6A6-201ENST00000358511 GRIK1P39086 918 aa9.03□□□□□ -0.96
COL6A6-201ENST00000358511 WDR72Q3MJ13 1102 aa9.03□□□□□ -0.96
COL6A6-201ENST00000358511 SLC22A9Q8IVM8 553 aa9.03□□□□□ -0.96
COL6A6-201ENST00000358511 RTKN2Q8IZC4 609 aa9.03□□□□□ -0.96
COL6A6-201ENST00000358511 ZCWPW1Q9H0M4 648 aa9.03□□□□□ -0.96
COL6A6-201ENST00000358511 OSGEPQ9NPF4 335 aa9.03□□□□□ -0.96
COL6A6-201ENST00000358511 STOML2Q9UJZ1 356 aa9.03□□□□□ -0.96
COL6A6-201ENST00000358511 TK2O00142 265 aa9.03□□□□□ -0.96
COL6A6-201ENST00000358511 PPEF1O14829 653 aaPredicted RBP9.03□□□□□ -0.96
COL6A6-201ENST00000358511 INPP4BO15327 924 aa9.03□□□□□ -0.96
COL6A6-201ENST00000358511 MYBL2P10244 700 aa9.03□□□□□ -0.96
COL6A6-201ENST00000358511 NAPEPLDQ6IQ20 393 aa9.03□□□□□ -0.96
COL6A6-201ENST00000358511 POU5F2Q8N7G0 328 aa9.03□□□□□ -0.96
COL6A6-201ENST00000358511 VPS33AQ96AX1 596 aa9.03□□□□□ -0.96
COL6A6-201ENST00000358511 COPS7BQ9H9Q2 264 aaPredicted RBP9.03□□□□□ -0.96
COL6A6-201ENST00000358511 CLK4Q9HAZ1 481 aaKnown RBP9.03□□□□□ -0.96
COL6A6-201ENST00000358511 UBDO15205 165 aa9.03□□□□□ -0.96
COL6A6-201ENST00000358511 ATP6V1G1O75348 118 aa9.03□□□□□ -0.96
COL6A6-201ENST00000358511 RRM2P31350 389 aa9.03□□□□□ -0.96
COL6A6-201ENST00000358511 SULT1E1P49888 294 aa9.03□□□□□ -0.96
COL6A6-201ENST00000358511 BNC1Q01954 994 aa9.03□□□□□ -0.96
COL6A6-201ENST00000358511 PRKAA1Q13131 559 aa9.03□□□□□ -0.96
COL6A6-201ENST00000358511 CLEC16AQ2KHT3 1053 aa9.03□□□□□ -0.96
COL6A6-201ENST00000358511 ZNF571Q7Z3V5 609 aaPredicted RBP9.03□□□□□ -0.96
COL6A6-201ENST00000358511 USP13Q92995 863 aaPredicted RBP9.03□□□□□ -0.96
COL6A6-201ENST00000358511 IL25Q9H293 177 aa9.03□□□□□ -0.96
COL6A6-201ENST00000358511 ZNF302Q9NR11 478 aa9.03□□□□□ -0.96
COL6A6-201ENST00000358511 PRPF4O43172 522 aaKnown RBP eCLIP9.03□□□□□ -0.96
COL6A6-201ENST00000358511 TFRCP02786 760 aaKnown RBP9.03□□□□□ -0.96
COL6A6-201ENST00000358511 NUDT17P0C025 328 aa9.03□□□□□ -0.96
COL6A6-201ENST00000358511 LCP1P13796 627 aa9.03□□□□□ -0.96
COL6A6-201ENST00000358511 POLD3Q15054 466 aaPredicted RBP9.03□□□□□ -0.96
COL6A6-201ENST00000358511 ATP6AP1LQ52LC2 224 aa9.03□□□□□ -0.96
COL6A6-201ENST00000358511 DHRSXQ8N5I4 330 aa9.03□□□□□ -0.96
COL6A6-201ENST00000358511 SH3TC2Q8TF17 1288 aa9.03□□□□□ -0.96
COL6A6-201ENST00000358511 ZNF512BQ96KM6 892 aaPredicted RBP9.03□□□□□ -0.96
COL6A6-201ENST00000358511 TMEM121Q9BTD3 319 aa9.03□□□□□ -0.96
COL6A6-201ENST00000358511 RPA3P35244 121 aaPredicted RBP9.02□□□□□ -0.96
COL6A6-201ENST00000358511 PRKAA2P54646 552 aa9.02□□□□□ -0.96
COL6A6-201ENST00000358511 ZNF846Q147U1 533 aa9.02□□□□□ -0.96
COL6A6-201ENST00000358511 PDK4Q16654 411 aa9.02□□□□□ -0.96
COL6A6-201ENST00000358511 AGKQ53H12 422 aa9.02□□□□□ -0.96
COL6A6-201ENST00000358511 LRRC49Q8IUZ0 686 aa9.02□□□□□ -0.96
COL6A6-201ENST00000358511 FAM45AQ8TCE6 357 aa9.02□□□□□ -0.96
COL6A6-201ENST00000358511 PPP1R14AQ96A00 147 aa9.02□□□□□ -0.96
COL6A6-201ENST00000358511 EPB41L4AQ9HCS5 686 aaPredicted RBP9.02□□□□□ -0.96
COL6A6-201ENST00000358511 JPH1Q9HDC5 661 aaPredicted RBP9.02□□□□□ -0.96
COL6A6-201ENST00000358511 ARHGEF3Q9NR81 526 aa9.02□□□□□ -0.96
COL6A6-201ENST00000358511 FEM1BQ9UK73 627 aa9.02□□□□□ -0.96
COL6A6-201ENST00000358511 KRT36O76013 467 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 BAIAP3O94812 1187 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 FGFR3P22607 806 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 RRP1BQ14684 758 aaKnown RBP9.02□□□□□ -0.97
COL6A6-201ENST00000358511 ACAP1Q15027 740 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 QRICH1Q2TAL8 776 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 OTUD3Q5T2D3 398 aaPredicted RBP9.02□□□□□ -0.97
COL6A6-201ENST00000358511 ABI1Q8IZP0 508 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 GALNT15Q8N3T1 639 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 COX4I2Q96KJ9 171 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 PRRG3Q9BZD7 231 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 TRNAU1APQ9NX07 287 aaKnown RBP9.02□□□□□ -0.97
COL6A6-201ENST00000358511 ERBB3P21860 1342 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 DPPA5A6NC42 116 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 ADORA2BP29275 332 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 MMP13P45452 471 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 ATAD3BQ5T9A4 648 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 ZDHHC13Q8IUH4 622 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 AMER2Q8N7J2 671 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 OTUD5Q96G74 571 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 ASAP1Q9ULH1 1129 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 ZMYM2Q9UBW7 1377 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 MATN2O00339 956 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 ZNF197O14709 1029 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 DCXO43602 365 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 SEC24AO95486 1093 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 FOSL2P15408 326 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 CBX3Q13185 183 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 RABL6Q3YEC7 729 aaPredicted RBP9.02□□□□□ -0.97
COL6A6-201ENST00000358511 ERFEQ4G0M1 354 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 GADL1Q6ZQY3 521 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 THEM5Q8N1Q8 247 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 SLC44A5Q8NCS7 719 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 MMTAG2Q9BU76 263 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms