RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 BPNT1O95861 308 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 ALBP02768 609 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 ANXA5P08758 320 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 OXCT1P55809 520 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 PTPAQ15257 358 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 ZMYND11Q15326 602 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 TRIQKQ629K1 86 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 GJD4Q96KN9 370 aaPredicted RBP10.05□□□□□ -0.8
CHD3-202ENST00000358181 OSBPL9Q96SU4 736 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 CGRRF1Q99675 332 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 WDCPQ9H6R7 721 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 TMEM138Q9NPI0 162 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 CDC23Q9UJX2 597 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 OR10H1Q9Y4A9 318 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 GGPS1O95749 300 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 TFE3P19532 575 aaPredicted RBP10.05□□□□□ -0.8
CHD3-202ENST00000358181 MYBPC2Q14324 1141 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 C16orf89Q6UX73 402 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 LRRC8DQ7L1W4 858 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 ZNF786Q8N393 782 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 ABHD5Q8WTS1 349 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 SH3GLB2Q9NR46 395 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 METTL5Q9NRN9 209 aaKnown RBP10.05□□□□□ -0.8
CHD3-202ENST00000358181 PCDHGB3Q9Y5G1 929 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 H3BN98 237 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 LTFP02788 710 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 LYNP07948 512 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 TRIM49P0CI25 452 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 TRIM49CP0CI26 452 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 PAICSP22234 425 aaKnown RBP10.05□□□□□ -0.8
CHD3-202ENST00000358181 RPL4P36578 427 aaKnown RBP10.05□□□□□ -0.8
CHD3-202ENST00000358181 SERPINB5P36952 375 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 RESTQ13127 1097 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 CLCA4Q14CN2 919 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 RNASE12Q5GAN4 147 aaKnown RBP10.05□□□□□ -0.8
CHD3-202ENST00000358181 ANGEL2Q5VTE6 544 aaKnown RBP10.05□□□□□ -0.8
CHD3-202ENST00000358181 FAM228AQ86W67 206 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 RHOT2Q8IXI1 618 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 ADGRG2Q8IZP9 1017 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 SENP6Q9GZR1 1112 aaPredicted RBP10.05□□□□□ -0.8
CHD3-202ENST00000358181 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.05□□□□□ -0.8
CHD3-202ENST00000358181 NARFQ9UHQ1 456 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 STOML2Q9UJZ1 356 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 ANGPT4Q9Y264 503 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 CASTOR2A6NHX0 329 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 SCAMP3O14828 347 aaKnown RBP10.05□□□□□ -0.8
CHD3-202ENST00000358181 NUP107P57740 925 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 SPIDRQ14159 915 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 SGSM1Q2NKQ1 1148 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 PDZK1Q5T2W1 519 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 CBWD2Q8IUF1 395 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 TESCQ96BS2 214 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 SPATA9Q9BWV2 254 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 MAGEF1Q9HAY2 307 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 DUSP12Q9UNI6 340 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 A0A096LPK6 155 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 ZBTB5O15062 677 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 KMOO15229 486 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 FAM20BO75063 409 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 RHOCP08134 193 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 KRT16P08779 473 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 PDGFRAP16234 1089 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 ZNF23P17027 643 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 ACADLP28330 430 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 MSX1P28360 303 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 CCNG1P51959 295 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 CAPZA1P52907 286 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 HNRNPH2P55795 449 aaKnown RBP10.05□□□□□ -0.8
CHD3-202ENST00000358181 DENND5BQ6ZUT9 1274 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 FAM220AQ7Z4H9 259 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 ZNF227Q86WZ6 799 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 ZDHHC6Q9H6R6 413 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 SLC38A7Q9NVC3 462 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 TOR4AQ9NXH8 423 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 DNMT3LQ9UJW3 386 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 MAP3K6O95382 1288 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 IL6P05231 212 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 CCDC166P0CW27 439 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 AP1S2P56377 157 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 INSCQ1MX18 579 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 P3H1Q32P28 736 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 FOXR2Q6PJQ5 311 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 SPATA21Q7Z572 469 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 LONP2Q86WA8 852 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 PCYOX1LQ8NBM8 494 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 OR2L5Q8NG80 312 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 USB1Q9BQ65 265 aaKnown RBP10.04□□□□□ -0.8
CHD3-202ENST00000358181 MAP3K4Q9Y6R4 1608 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 ANKARQ7Z5J8 1434 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 NPC1L1Q9UHC9 1359 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 ARL5CA6NH57 179 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 DNALI1O14645 258 aaPredicted RBP10.04□□□□□ -0.8
CHD3-202ENST00000358181 KPNA5O15131 536 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 TP73O15350 636 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 QARSP47897 775 aaKnown RBP10.04□□□□□ -0.8
CHD3-202ENST00000358181 LNX2Q8N448 690 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 PGLYRP2Q96PD5 576 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 NDST4Q9H3R1 872 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 DCP1AQ9NPI6 582 aaPredicted RBP10.04□□□□□ -0.8
CHD3-202ENST00000358181 KLHL28Q9NXS3 571 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms