RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 RAD51BO15315 384 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 VPS4BO75351 444 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 ECDO95905 644 aaPredicted RBP13.23□□□□□ -0.29
SMC4-202ENST00000357388 KLRC1P26715 233 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 TGFBR2P37173 567 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 PNPLA4P41247 253 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 ATP12AP54707 1039 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 KIAA0408Q6ZU52 694 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 EPHX4Q8IUS5 362 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 DEFB107AQ8IZN7 70 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 TDRD5Q8NAT2 981 aaKnown RBP13.23□□□□□ -0.29
SMC4-202ENST00000357388 CELF1Q92879 486 aaKnown RBP13.23□□□□□ -0.29
SMC4-202ENST00000357388 PABPC5Q96DU9 382 aaKnown RBP13.23□□□□□ -0.29
SMC4-202ENST00000357388 FAM120BQ96EK7 910 aaKnown RBP13.23□□□□□ -0.29
SMC4-202ENST00000357388 PPP1R10Q96QC0 940 aaKnown RBP13.23□□□□□ -0.29
SMC4-202ENST00000357388 CRAMP1Q96RY5 1269 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 PDCD10Q9BUL8 212 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 COLEC11Q9BWP8 271 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 EPB41L4AQ9HCS5 686 aaPredicted RBP13.23□□□□□ -0.29
SMC4-202ENST00000357388 ING4Q9UNL4 249 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 SDR42E2A6NKP2 422 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 FLT3P36888 993 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 CHN2P52757 468 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 PRMT7Q9NVM4 692 aaPredicted RBP13.23□□□□□ -0.29
SMC4-202ENST00000357388 CROTQ9UKG9 612 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 AAR2Q9Y312 384 aaKnown RBP13.23□□□□□ -0.29
SMC4-202ENST00000357388 SAMD9Q5K651 1589 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 CPDO75976 1380 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 HOXA2O43364 376 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 RPLP2P05387 115 aaKnown RBP13.23□□□□□ -0.29
SMC4-202ENST00000357388 VAC14Q08AM6 782 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 XRRA1Q6P2D8 792 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 CASP12Q6UXS9 341 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 BRINP3Q76B58 766 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 OR6Y1Q8NGX8 325 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 CHID1Q9BWS9 393 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 LRRC40Q9H9A6 602 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 EURLQ9NYK6 297 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 STOML2Q9UJZ1 356 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 RPL26L1Q9UNX3 145 aaKnown RBP13.23□□□□□ -0.29
SMC4-202ENST00000357388 TMA7Q9Y2S6 64 aaKnown RBP13.23□□□□□ -0.29
SMC4-202ENST00000357388 ABLIM1O14639 778 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 UBDO15205 165 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 SLC2A3P11169 496 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 TGM2P21980 687 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 LGALS3BPQ08380 585 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 NCOA4Q13772 614 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 KCTD21Q4G0X4 260 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 CACTIN-AS1Q8N1I8 211 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 NRDE2Q9H7Z3 1164 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 DPP7Q9UHL4 492 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 CES2O00748 559 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 VPS26AO75436 327 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 RAG1P15918 1043 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 GSTT1P30711 240 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 SOX11P35716 441 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 PSMD4P55036 377 aaKnown RBP13.22□□□□□ -0.29
SMC4-202ENST00000357388 FCGRTP55899 365 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 MCL1Q07820 350 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 PRKAA1Q13131 559 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 PDK2Q15119 407 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 MAPK11Q15759 364 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 FIGNQ5HY92 759 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 ACAD10Q6JQN1 1059 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.22□□□□□ -0.291e-6■■■■■ 406.9
SMC4-202ENST00000357388 CCDC36Q8IYA8 594 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 FAM71DQ8N9W8 422 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 FBXO36Q8NEA4 188 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 GPRC5AQ8NFJ5 357 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 PAFAH2Q99487 392 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 DCUN1D5Q9BTE7 237 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 SORCS3Q9UPU3 1222 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 RUVBL2Q9Y230 463 aaKnown RBP13.22□□□□□ -0.29
SMC4-202ENST00000357388 C2CD2Q9Y426 696 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 TRIM43BA6NCK2 446 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 PP2D1A8MPX8 630 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 H7C4K7 107 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 NR5A2O00482 541 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 SKAP2O75563 359 aaPredicted RBP13.22□□□□□ -0.29
SMC4-202ENST00000357388 SMNDC1O75940 238 aaKnown RBP eCLIP13.22□□□□□ -0.292e-16■■■■■ 67.6
SMC4-202ENST00000357388 PGM3O95394 542 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 MYL12AP19105 171 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 CHRM3P20309 590 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 CYP2B6P20813 491 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 TWF1Q12792 350 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 STX4Q12846 297 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 CHST13Q8NET6 341 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 DGCR14Q96DF8 476 aaKnown RBP13.22□□□□□ -0.29
SMC4-202ENST00000357388 PHF20Q9BVI0 1012 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 GPR63Q9BZJ6 419 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 MYL12BO14950 172 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 ANXA6P08133 673 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 HMBSP08397 361 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 CPA3P15088 417 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 PECAM1P16284 738 aaPredicted RBP13.22□□□□□ -0.29
SMC4-202ENST00000357388 AMPD2Q01433 879 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 CCDC157Q569K6 752 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 EXOC3L1Q86VI1 746 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 NT5DC4Q86YG4 428 aa13.22□□□□□ -0.29
SMC4-202ENST00000357388 ULK2Q8IYT8 1036 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms