RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 MAN1C1Q9NR34 630 aa13.62□□□□□ -0.23
SCN8A-202ENST00000355133 KBTBD4Q9NVX7 518 aa13.62□□□□□ -0.23
SCN8A-202ENST00000355133 DYRK1BQ9Y463 629 aa13.62□□□□□ -0.23
SCN8A-202ENST00000355133 PRR23D1E9PI22 279 aaPredicted RBP13.62□□□□□ -0.23
SCN8A-202ENST00000355133 RASSF9O75901 435 aa13.62□□□□□ -0.23
SCN8A-202ENST00000355133 PRR23D2P0DMB1 279 aaPredicted RBP13.62□□□□□ -0.23
SCN8A-202ENST00000355133 CYP2F1P24903 491 aa13.62□□□□□ -0.23
SCN8A-202ENST00000355133 SLC26A2P50443 739 aa13.62□□□□□ -0.23
SCN8A-202ENST00000355133 TGFB2P61812 414 aa13.62□□□□□ -0.23
SCN8A-202ENST00000355133 CSHL1Q14406 222 aa13.62□□□□□ -0.23
SCN8A-202ENST00000355133 PLCL1Q15111 1095 aa13.62□□□□□ -0.23
SCN8A-202ENST00000355133 MAP1SQ66K74 1059 aaPredicted RBP13.62□□□□□ -0.23
SCN8A-202ENST00000355133 DLC1Q96QB1 1528 aa13.62□□□□□ -0.23
SCN8A-202ENST00000355133 ALBP02768 609 aa13.62□□□□□ -0.23
SCN8A-202ENST00000355133 DSG3P32926 999 aa13.62□□□□□ -0.23
SCN8A-202ENST00000355133 CEMIPQ8WUJ3 1361 aa13.62□□□□□ -0.23
SCN8A-202ENST00000355133 CNBD2Q96M20 576 aa13.62□□□□□ -0.23
SCN8A-202ENST00000355133 APPL1Q9UKG1 709 aa13.62□□□□□ -0.23
SCN8A-202ENST00000355133 USP20Q9Y2K6 914 aa13.62□□□□□ -0.23
SCN8A-202ENST00000355133 PCDHB12Q9Y5F1 795 aa13.62□□□□□ -0.23
SCN8A-202ENST00000355133 PROSCO94903 275 aa13.62□□□□□ -0.23
SCN8A-202ENST00000355133 GLP2RO95838 553 aa13.62□□□□□ -0.23
SCN8A-202ENST00000355133 TCF3P15923 654 aa13.62□□□□□ -0.23
SCN8A-202ENST00000355133 NCKAP1LP55160 1127 aa13.62□□□□□ -0.23
SCN8A-202ENST00000355133 SV2AQ7L0J3 742 aa13.62□□□□□ -0.23
SCN8A-202ENST00000355133 CCNJLQ8IV13 435 aa13.62□□□□□ -0.23
SCN8A-202ENST00000355133 KRT78Q8N1N4 520 aa13.62□□□□□ -0.23
SCN8A-202ENST00000355133 COLGALT1Q8NBJ5 622 aa13.62□□□□□ -0.23
SCN8A-202ENST00000355133 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.62□□□□□ -0.23
SCN8A-202ENST00000355133 LPCAT1Q8NF37 534 aa13.62□□□□□ -0.23
SCN8A-202ENST00000355133 SYT15Q9BQS2 421 aa13.62□□□□□ -0.23
SCN8A-202ENST00000355133 NFKBIZQ9BYH8 718 aa13.62□□□□□ -0.23
SCN8A-202ENST00000355133 PLA2G4CQ9UP65 541 aa13.62□□□□□ -0.23
SCN8A-202ENST00000355133 PCDH8O95206 1070 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 SEC23AQ15436 765 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 TFAP2DQ7Z6R9 452 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 TRAPPC12Q8WVT3 735 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 TADA1Q96BN2 335 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 PGLYRP2Q96PD5 576 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 PAFAH2Q99487 392 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 TLR8Q9NR97 1041 aaKnown RBP13.61□□□□□ -0.23
SCN8A-202ENST00000355133 ITGB6P18564 788 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 KLC1Q07866 573 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 KBTBD12Q3ZCT8 623 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 OVOS1Q6IE37 1185 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 CENPLQ8N0S6 344 aaPredicted RBP13.61□□□□□ -0.23
SCN8A-202ENST00000355133 B3GALNT2Q8NCR0 500 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 DNERQ8NFT8 737 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 RMND5AQ9H871 391 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 GPAMQ9HCL2 828 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 DIP2AQ14689 1571 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 M0R3G1 203 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 CCND1P24385 295 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 PSMA4P25789 261 aaKnown RBP13.61□□□□□ -0.23
SCN8A-202ENST00000355133 C3orf67Q6ZVT6 689 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 CYP2W1Q8TAV3 490 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 RIN3Q8TB24 985 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 CYP3A43Q9HB55 503 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 IMPAD1Q9NX62 359 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.61□□□□□ -0.23
SCN8A-202ENST00000355133 ITGA11Q9UKX5 1188 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 GNG14A0A1W2PPG7 69 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 CCDC159P0C7I6 412 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 ACADMP11310 421 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 HALP42357 657 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 SFSWAPQ12872 951 aaKnown RBP13.61□□□□□ -0.23
SCN8A-202ENST00000355133 STARD3Q14849 445 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 KIAA2013Q8IYS2 634 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 SAMD3Q8N6K7 520 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 ZSWIM2Q8NEG5 633 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 ADGRE3Q9BY15 652 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 MTFR1LQ9H019 292 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 UTP6Q9NYH9 597 aaKnown RBP13.61□□□□□ -0.23
SCN8A-202ENST00000355133 WHRNQ9P202 907 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 NKRFO15226 690 aaKnown RBP eCLIP13.61□□□□□ -0.23
SCN8A-202ENST00000355133 MAP3K13O43283 966 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 USP1O94782 785 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 GHRP10912 638 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 FGFR2P21802 821 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 NDST1P52848 882 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 BMPR2Q13873 1038 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 ILDR2Q71H61 639 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 MICU2Q8IYU8 434 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 CCDC126Q96EE4 140 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 DRG1Q9Y295 367 aaKnown RBP13.61□□□□□ -0.23
SCN8A-202ENST00000355133 DNAJC16Q9Y2G8 782 aa13.61□□□□□ -0.23
SCN8A-202ENST00000355133 TMEM150BA6NC51 233 aa13.6□□□□□ -0.23
SCN8A-202ENST00000355133 LSM8O95777 96 aaKnown RBP13.6□□□□□ -0.23
SCN8A-202ENST00000355133 GZMAP12544 262 aa13.6□□□□□ -0.23
SCN8A-202ENST00000355133 ZMAT2Q96NC0 199 aaKnown RBP13.6□□□□□ -0.23
SCN8A-202ENST00000355133 MTG1Q9BT17 334 aaPredicted RBP13.6□□□□□ -0.23
SCN8A-202ENST00000355133 CAAP1Q9H8G2 361 aa13.6□□□□□ -0.23
SCN8A-202ENST00000355133 TSPAN16Q9UKR8 245 aa13.6□□□□□ -0.23
SCN8A-202ENST00000355133 INO80Q9ULG1 1556 aaPredicted RBP13.6□□□□□ -0.23
SCN8A-202ENST00000355133 RNF103O00237 685 aa13.6□□□□□ -0.23
SCN8A-202ENST00000355133 TPH1P17752 444 aa13.6□□□□□ -0.23
SCN8A-202ENST00000355133 SUGP1Q8IWZ8 645 aaKnown RBP13.6□□□□□ -0.23
SCN8A-202ENST00000355133 ERLEC1Q96DZ1 483 aa13.6□□□□□ -0.23
SCN8A-202ENST00000355133 VMP1Q96GC9 406 aa13.6□□□□□ -0.23
SCN8A-202ENST00000355133 RIOX1Q9H6W3 641 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms