RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 MAGEA6P43360 314 aa23.15■■□□□ 1.3
NKX2-1-201ENST00000354822 BST2Q10589 180 aaKnown RBP23.15■■□□□ 1.3
NKX2-1-201ENST00000354822 SOWAHAQ2M3V2 549 aa23.15■■□□□ 1.3
NKX2-1-201ENST00000354822 TBC1D1Q86TI0 1168 aaPredicted RBP23.15■■□□□ 1.3
NKX2-1-201ENST00000354822 BANPQ8N9N5 519 aa23.15■■□□□ 1.3
NKX2-1-201ENST00000354822 VPS11Q9H270 941 aa23.15■■□□□ 1.3
NKX2-1-201ENST00000354822 SLC5A4Q9NY91 659 aa23.15■■□□□ 1.3
NKX2-1-201ENST00000354822 GRID1Q9ULK0 1009 aa23.15■■□□□ 1.3
NKX2-1-201ENST00000354822 XPOTO43592 962 aaKnown RBP23.14■■□□□ 1.3
NKX2-1-201ENST00000354822 MT-ND3P03897 115 aa23.14■■□□□ 1.3
NKX2-1-201ENST00000354822 DARSP14868 501 aaKnown RBP23.14■■□□□ 1.3
NKX2-1-201ENST00000354822 ACADSBP45954 432 aa23.14■■□□□ 1.3
NKX2-1-201ENST00000354822 NR2C2P49116 596 aa23.14■■□□□ 1.3
NKX2-1-201ENST00000354822 RPL34P49207 117 aaKnown RBP23.14■■□□□ 1.3
NKX2-1-201ENST00000354822 BCAT1P54687 386 aa23.14■■□□□ 1.3
NKX2-1-201ENST00000354822 HDAC4P56524 1084 aa23.14■■□□□ 1.3
NKX2-1-201ENST00000354822 SLC26A9Q7LBE3 791 aa23.14■■□□□ 1.3
NKX2-1-201ENST00000354822 CDKL3Q8IVW4 592 aaPredicted RBP23.14■■□□□ 1.3
NKX2-1-201ENST00000354822 SLC44A1Q8WWI5 657 aa23.14■■□□□ 1.3
NKX2-1-201ENST00000354822 ZNF75CPQ92670 426 aaPredicted RBP23.14■■□□□ 1.3
NKX2-1-201ENST00000354822 CENPIQ92674 756 aaPredicted RBP23.14■■□□□ 1.3
NKX2-1-201ENST00000354822 KLHL29Q96CT2 875 aa23.14■■□□□ 1.3
NKX2-1-201ENST00000354822 SCN1AP35498 2009 aa23.14■■□□□ 1.29
NKX2-1-201ENST00000354822 TCRBV9S1A1TA0A576 114 aa23.14■■□□□ 1.29
NKX2-1-201ENST00000354822 A6NJR5 290 aa23.14■■□□□ 1.29
NKX2-1-201ENST00000354822 CELF2O95319 508 aaKnown RBP23.14■■□□□ 1.29
NKX2-1-201ENST00000354822 INHBAP08476 426 aa23.14■■□□□ 1.29
NKX2-1-201ENST00000354822 RBL1P28749 1068 aa23.14■■□□□ 1.29
NKX2-1-201ENST00000354822 PNPLA4P41247 253 aa23.14■■□□□ 1.29
NKX2-1-201ENST00000354822 NRLP54845 237 aa23.14■■□□□ 1.29
NKX2-1-201ENST00000354822 MGAT5Q09328 741 aa23.14■■□□□ 1.29
NKX2-1-201ENST00000354822 TMEM62Q0P6H9 643 aa23.14■■□□□ 1.29
NKX2-1-201ENST00000354822 DPYSL2Q16555 572 aa23.14■■□□□ 1.29
NKX2-1-201ENST00000354822 FBXO47Q5MNV8 452 aa23.14■■□□□ 1.29
NKX2-1-201ENST00000354822 IGDCC3Q8IVU1 814 aa23.14■■□□□ 1.29
NKX2-1-201ENST00000354822 C18orf25Q96B23 403 aaPredicted RBP23.14■■□□□ 1.29
NKX2-1-201ENST00000354822 LRRC39Q96DD0 335 aa23.14■■□□□ 1.29
NKX2-1-201ENST00000354822 PTPN18Q99952 460 aa23.14■■□□□ 1.29
NKX2-1-201ENST00000354822 CXCL16Q9H2A7 254 aa23.14■■□□□ 1.29
NKX2-1-201ENST00000354822 NRDE2Q9H7Z3 1164 aa23.14■■□□□ 1.29
NKX2-1-201ENST00000354822 GPATCH2LQ9NWQ4 482 aa23.14■■□□□ 1.29
NKX2-1-201ENST00000354822 NME7Q9Y5B8 376 aa23.14■■□□□ 1.29
NKX2-1-201ENST00000354822 KBTBD13C9JR72 458 aa23.13■■□□□ 1.29
NKX2-1-201ENST00000354822 PIRO00625 290 aa23.13■■□□□ 1.29
NKX2-1-201ENST00000354822 TRDMT1O14717 391 aaKnown RBP23.13■■□□□ 1.29
NKX2-1-201ENST00000354822 DCTN3O75935 186 aa23.13■■□□□ 1.29
NKX2-1-201ENST00000354822 YWHAGP61981 247 aaKnown RBP eCLIP23.13■■□□□ 1.29
NKX2-1-201ENST00000354822 C7orf31Q8N865 590 aa23.13■■□□□ 1.29
NKX2-1-201ENST00000354822 ZNF560Q96MR9 790 aa23.13■■□□□ 1.29
NKX2-1-201ENST00000354822 C11orf84Q9BUA3 381 aaPredicted RBP23.13■■□□□ 1.29
NKX2-1-201ENST00000354822 GDAP2Q9NXN4 497 aa23.13■■□□□ 1.29
NKX2-1-201ENST00000354822 MBLAC1A4D2B0 266 aaPredicted RBP23.13■■□□□ 1.29
NKX2-1-201ENST00000354822 GABBR2O75899 941 aa23.13■■□□□ 1.29
NKX2-1-201ENST00000354822 RECQL4O94761 1208 aa23.13■■□□□ 1.29
NKX2-1-201ENST00000354822 GSTA2P09210 222 aa23.13■■□□□ 1.29
NKX2-1-201ENST00000354822 SLC8A1P32418 973 aa23.13■■□□□ 1.29
NKX2-1-201ENST00000354822 GNL1P36915 607 aaPredicted RBP23.13■■□□□ 1.29
NKX2-1-201ENST00000354822 GTF2A1P52655 376 aaPredicted RBP23.13■■□□□ 1.29
NKX2-1-201ENST00000354822 MCUQ8NE86 351 aa23.13■■□□□ 1.29
NKX2-1-201ENST00000354822 TCP10LQ8TDR4 215 aa23.13■■□□□ 1.29
NKX2-1-201ENST00000354822 HSFY1Q96LI6 401 aa23.13■■□□□ 1.29
NKX2-1-201ENST00000354822 OSMRQ99650 979 aa23.13■■□□□ 1.29
NKX2-1-201ENST00000354822 ETNK2Q9NVF9 386 aa23.13■■□□□ 1.29
NKX2-1-201ENST00000354822 TRIP11Q15643 1979 aa23.12■■□□□ 1.29
NKX2-1-201ENST00000354822 SLC15A5A6NIM6 579 aa23.12■■□□□ 1.29
NKX2-1-201ENST00000354822 SMIM10L2AP0DMW4 78 aa23.12■■□□□ 1.29
NKX2-1-201ENST00000354822 SMIM10L2BP0DMW5 78 aa23.12■■□□□ 1.29
NKX2-1-201ENST00000354822 ALADP13716 330 aa23.12■■□□□ 1.29
NKX2-1-201ENST00000354822 CCNB1P14635 433 aa23.12■■□□□ 1.29
NKX2-1-201ENST00000354822 CYP2F1P24903 491 aa23.12■■□□□ 1.29
NKX2-1-201ENST00000354822 L1CAMP32004 1257 aa23.12■■□□□ 1.29
NKX2-1-201ENST00000354822 PTK7Q13308 1070 aa23.12■■□□□ 1.29
NKX2-1-201ENST00000354822 IRF5Q13568 498 aa23.12■■□□□ 1.29
NKX2-1-201ENST00000354822 CA9Q16790 459 aa23.12■■□□□ 1.29
NKX2-1-201ENST00000354822 ZNF398Q8TD17 642 aa23.12■■□□□ 1.29
NKX2-1-201ENST00000354822 B3GNT5Q9BYG0 378 aa23.12■■□□□ 1.29
NKX2-1-201ENST00000354822 ADAM33Q9BZ11 813 aa23.12■■□□□ 1.29
NKX2-1-201ENST00000354822 CDHR5Q9HBB8 845 aa23.12■■□□□ 1.29
NKX2-1-201ENST00000354822 SLCO1B3Q9NPD5 702 aa23.12■■□□□ 1.29
NKX2-1-201ENST00000354822 ARHGEF3Q9NR81 526 aa23.12■■□□□ 1.29
NKX2-1-201ENST00000354822 TXLNGQ9NUQ3 528 aa23.12■■□□□ 1.29
NKX2-1-201ENST00000354822 GTF2IRD1Q9UHL9 959 aa23.12■■□□□ 1.29
NKX2-1-201ENST00000354822 ZNF236Q9UL36 1845 aa23.11■■□□□ 1.29
NKX2-1-201ENST00000354822 KPNA7A9QM74 516 aa23.11■■□□□ 1.29
NKX2-1-201ENST00000354822 F2P00734 622 aa23.11■■□□□ 1.29
NKX2-1-201ENST00000354822 CYP2C9P11712 490 aa23.11■■□□□ 1.29
NKX2-1-201ENST00000354822 KBTBD12Q3ZCT8 623 aa23.11■■□□□ 1.29
NKX2-1-201ENST00000354822 PPP6R3Q5H9R7 873 aaPredicted RBP23.11■■□□□ 1.29
NKX2-1-201ENST00000354822 FYB2Q5VWT5 728 aa23.11■■□□□ 1.29
NKX2-1-201ENST00000354822 NPLOC4Q8TAT6 608 aa23.11■■□□□ 1.29
NKX2-1-201ENST00000354822 LRRC37BQ96QE4 947 aa23.11■■□□□ 1.29
NKX2-1-201ENST00000354822 SNX25Q9H3E2 840 aa23.11■■□□□ 1.29
NKX2-1-201ENST00000354822 PRDM16Q9HAZ2 1276 aa23.11■■□□□ 1.29
NKX2-1-201ENST00000354822 HES2Q9Y543 173 aa23.11■■□□□ 1.29
NKX2-1-201ENST00000354822 DYNC1LI2O43237 492 aaPredicted RBP23.11■■□□□ 1.29
NKX2-1-201ENST00000354822 GCATO75600 419 aa23.11■■□□□ 1.29
NKX2-1-201ENST00000354822 ATP6V1G2O95670 118 aa23.11■■□□□ 1.29
NKX2-1-201ENST00000354822 GLRA4Q5JXX5 417 aa23.11■■□□□ 1.29
NKX2-1-201ENST00000354822 LGSNQ5TDP6 509 aa23.11■■□□□ 1.29
NKX2-1-201ENST00000354822 ASRGL1Q7L266 308 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms