RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 PEX12O00623 359 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 CA12O43570 354 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 RGS10O43665 173 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 VIPP01282 170 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 TUBBP07437 444 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 HK1P19367 917 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 KCNA3P22001 575 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 PBX3P40426 434 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 POU6F2P78424 691 aaPredicted RBP1.83□□□□□ -2.12
BRCA1-202ENST00000354071 ROR1Q01973 937 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 PPP2R5CQ13362 524 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 GPR68Q15743 365 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 NFIL3Q16649 462 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 VMACQ2NL98 169 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 TMEM196Q5HYL7 178 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 NUGGCQ68CJ6 796 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 MRNIPQ6NTE8 343 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 CLEC9AQ6UXN8 241 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 SZRD1Q7Z422 152 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 CEP97Q8IW35 865 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 TEX11Q8IYF3 940 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 GPR135Q8IZ08 494 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 TTC39CQ8N584 583 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 SRBD1Q8N5C6 995 aaKnown RBP1.83□□□□□ -2.12
BRCA1-202ENST00000354071 PLD5Q8N7P1 536 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 OR6Y1Q8NGX8 325 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 PIP5K1AQ99755 562 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 ZNF112Q9UJU3 913 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 RPS6KA6Q9UK32 745 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 ZNF215Q9UL58 517 aaPredicted RBP1.83□□□□□ -2.12
BRCA1-202ENST00000354071 PCDHB2Q9Y5E7 798 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 PCDHA10Q9Y5I2 948 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 RGPD3A6NKT7 1758 aaPredicted RBP1.83□□□□□ -2.12
BRCA1-202ENST00000354071 RGPD4Q7Z3J3 1758 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 ARHGEF40Q8TER5 1519 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 SLC38A8A6NNN8 435 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 POLRMTO00411 1230 aaKnown RBP1.82□□□□□ -2.12
BRCA1-202ENST00000354071 ZNF185O15231 689 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 IPO13O94829 963 aaKnown RBP1.82□□□□□ -2.12
BRCA1-202ENST00000354071 STARD3NLO95772 234 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 RPN1P04843 607 aaKnown RBP1.82□□□□□ -2.12
BRCA1-202ENST00000354071 RARGP13631 454 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 ZNF28P17035 718 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 DRD1P21728 446 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 GARSP41250 739 aaKnown RBP1.82□□□□□ -2.12
BRCA1-202ENST00000354071 PXNP49023 591 aaPredicted RBP1.82□□□□□ -2.12
BRCA1-202ENST00000354071 PRKAG1P54619 331 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 GP2P55259 537 aaKnown RBP1.82□□□□□ -2.12
BRCA1-202ENST00000354071 CD300EQ496F6 205 aaPredicted RBP1.82□□□□□ -2.12
BRCA1-202ENST00000354071 SH2D4BQ5SQS7 431 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 DEPDC1Q5TB30 811 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 RGS7BPQ6MZT1 257 aaPredicted RBP1.82□□□□□ -2.12
BRCA1-202ENST00000354071 TAPT1Q6NXT6 567 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 RPUSD3Q6P087 351 aaKnown RBP1.82□□□□□ -2.12
BRCA1-202ENST00000354071 C16orf89Q6UX73 402 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 BBS12Q6ZW61 710 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 CPLX4Q7Z7G2 160 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 B3GNT8Q7Z7M8 397 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 RAB11FIP4Q86YS3 637 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 LINC00346Q8IVM7 164 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 FAM71DQ8N9W8 422 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 KYQ8NBH2 561 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 METTL6Q8TCB7 284 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 MISP3Q96FF7 219 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 KIRREL1Q96J84 757 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 C7orf26Q96N11 449 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 CLSTN3Q9BQT9 956 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 HTATIP2Q9BUP3 242 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 KRTAP9-3Q9BYQ3 159 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 CTDSP1Q9GZU7 261 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 JMJD4Q9H9V9 463 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 NOD2Q9HC29 1040 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 TRPC5Q9UL62 973 aaPredicted RBP1.82□□□□□ -2.12
BRCA1-202ENST00000354071 SSX2IPQ9Y2D8 614 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 NPIPB15A6NHN6 443 aaPredicted RBP1.82□□□□□ -2.12
BRCA1-202ENST00000354071 GSC2O15499 205 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 MAFO75444 373 aaPredicted RBP1.82□□□□□ -2.12
BRCA1-202ENST00000354071 SGPL1O95470 568 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 GASTP01350 101 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 OAS2P29728 719 aaKnown RBP1.82□□□□□ -2.12
BRCA1-202ENST00000354071 HSPA1LP34931 641 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 GZMKP49863 264 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 MEOX1P50221 254 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 WNT3AP56704 352 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 SNX16P57768 344 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 LRMPQ12912 555 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 ZNF667Q5HYK9 610 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 ZMYM1Q5SVZ6 1142 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 ARHGAP40Q5TG30 622 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 FAM160B1Q5W0V3 765 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 ANKRD40Q6AI12 368 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 SHQ1Q6PI26 577 aaKnown RBP1.82□□□□□ -2.12
BRCA1-202ENST00000354071 CRELD2Q6UXH1 353 aaPredicted RBP1.82□□□□□ -2.12
BRCA1-202ENST00000354071 ANKS1BQ7Z6G8 1248 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 GPR149Q86SP6 731 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 WDTC1Q8N5D0 677 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 MB21D1Q8N884 522 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 CCDC191Q8NCU4 936 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 CPA5Q8WXQ8 436 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 CUL5Q93034 780 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms