RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 DHFR2Q86XF0 187 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 BHLHE22Q8NFJ8 381 aaPredicted RBP5.19□□□□□ -1.58
SKP1-202ENST00000353411 NUAK2Q9H093 628 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 KIAA1522Q9P206 1035 aaPredicted RBP5.19□□□□□ -1.58
SKP1-202ENST00000353411 ASAP1Q9ULH1 1129 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 TRIM49D1C9J1S8 452 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 PDXKO00764 312 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 TRIM13O60858 407 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 TBX10O75333 385 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 TOMM70O94826 608 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 CRABP2P29373 138 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 GTF2H1P32780 548 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 EIF4A1P60842 406 aaKnown RBP5.19□□□□□ -1.58
SKP1-202ENST00000353411 RELAQ04206 551 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 TCIRG1Q13488 830 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 METTL21CQ5VZV1 264 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 BICRALQ6AI39 1079 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 FASTKD5Q7L8L6 764 aaKnown RBP5.19□□□□□ -1.58
SKP1-202ENST00000353411 TMEM126BQ8IUX1 230 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 ASCC1Q8N9N2 400 aaKnown RBP5.19□□□□□ -1.58
SKP1-202ENST00000353411 HELQQ8TDG4 1101 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 VPS33AQ96AX1 596 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 ACCSQ96QU6 501 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 ZNF717Q9BY31 904 aaPredicted RBP5.19□□□□□ -1.58
SKP1-202ENST00000353411 ZNF219Q9P2Y4 722 aaPredicted RBP5.19□□□□□ -1.58
SKP1-202ENST00000353411 NKX1-2Q9UD57 310 aaPredicted RBP5.19□□□□□ -1.58
SKP1-202ENST00000353411 PLCL2Q9UPR0 1127 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 CDC42BPGQ6DT37 1551 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 DIP2CQ9Y2E4 1556 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 A0A0G2JPF8 293 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 HNRNPCL3B7ZW38 293 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 INO80B-WBP1J3KQ70 363 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 PSMD12O00232 456 aaPredicted RBP5.19□□□□□ -1.58
SKP1-202ENST00000353411 PDGFRBP09619 1106 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 GSTT2P0CG29 244 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 GSTT2BP0CG30 244 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 HNRNPCL4P0DMR1 293 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 PIK3R1P27986 724 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 PSMB9P28065 219 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 ATXN3P54252 364 aaPredicted RBP5.19□□□□□ -1.58
SKP1-202ENST00000353411 HABP4Q5JVS0 413 aaKnown RBP5.19□□□□□ -1.58
SKP1-202ENST00000353411 SNX32Q86XE0 403 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 C8orf59Q8N0T1 100 aaPredicted RBP5.19□□□□□ -1.58
SKP1-202ENST00000353411 CCNYL1Q8N7R7 359 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 MCUQ8NE86 351 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 HTRA1Q92743 480 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 ZNF317Q96PQ6 595 aaPredicted RBP5.19□□□□□ -1.58
SKP1-202ENST00000353411 TCF7L2Q9NQB0 619 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 TBC1D14Q9P2M4 693 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 APEX2Q9UBZ4 518 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 SHOC2Q9UQ13 582 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 GNEQ9Y223 722 aaKnown RBP5.19□□□□□ -1.58
SKP1-202ENST00000353411 PREX1Q8TCU6 1659 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 MEI4A8MW99 385 aa5.18□□□□□ -1.58
SKP1-202ENST00000353411 FAM47E-STBD1D6RA91 191 aa5.18□□□□□ -1.58
SKP1-202ENST00000353411 PRPSAP2O60256 369 aa5.18□□□□□ -1.58
SKP1-202ENST00000353411 MYCP01106 439 aaPredicted RBP5.18□□□□□ -1.58
SKP1-202ENST00000353411 RALBP11234 206 aa5.18□□□□□ -1.58
SKP1-202ENST00000353411 MYCLP1P12525 358 aaPredicted RBP5.18□□□□□ -1.58
SKP1-202ENST00000353411 ADD2P35612 726 aa5.18□□□□□ -1.58
SKP1-202ENST00000353411 SLC26A3P40879 764 aa5.18□□□□□ -1.58
SKP1-202ENST00000353411 HNRNPFP52597 415 aaKnown RBP5.18□□□□□ -1.58
SKP1-202ENST00000353411 YWHAHQ04917 246 aaPredicted RBP5.18□□□□□ -1.58
SKP1-202ENST00000353411 CHRNDQ07001 517 aa5.18□□□□□ -1.58
SKP1-202ENST00000353411 ILF2Q12905 390 aaKnown RBP5.18□□□□□ -1.58
SKP1-202ENST00000353411 ZC3H12BQ5HYM0 836 aaKnown RBP5.18□□□□□ -1.58
SKP1-202ENST00000353411 POTEHQ6S545 545 aa5.18□□□□□ -1.58
SKP1-202ENST00000353411 RASSF6Q6ZTQ3 369 aa5.18□□□□□ -1.58
SKP1-202ENST00000353411 AMIGO2Q86SJ2 522 aa5.18□□□□□ -1.58
SKP1-202ENST00000353411 FBXL16Q8N461 479 aa5.18□□□□□ -1.58
SKP1-202ENST00000353411 POU5F2Q8N7G0 328 aa5.18□□□□□ -1.58
SKP1-202ENST00000353411 NLRP3Q96P20 1036 aa5.18□□□□□ -1.58
SKP1-202ENST00000353411 FAM213AQ9BRX8 229 aa5.18□□□□□ -1.58
SKP1-202ENST00000353411 VTI1BQ9UEU0 232 aa5.18□□□□□ -1.58
SKP1-202ENST00000353411 TMEM98Q9Y2Y6 226 aa5.18□□□□□ -1.58
SKP1-202ENST00000353411 ACEP12821 1306 aa5.18□□□□□ -1.58
SKP1-202ENST00000353411 FRMPD4Q14CM0 1322 aa5.18□□□□□ -1.58
SKP1-202ENST00000353411 NPR3P17342 541 aa5.18□□□□□ -1.58
SKP1-202ENST00000353411 GRK3P35626 688 aa5.18□□□□□ -1.58
SKP1-202ENST00000353411 ACTR3P61158 418 aa5.18□□□□□ -1.58
SKP1-202ENST00000353411 CHRNB3Q05901 458 aa5.18□□□□□ -1.58
SKP1-202ENST00000353411 MMRN1Q13201 1228 aa5.18□□□□□ -1.58
SKP1-202ENST00000353411 NSMFQ6X4W1 530 aa5.18□□□□□ -1.58
SKP1-202ENST00000353411 DCLK2Q8N568 766 aa5.18□□□□□ -1.58
SKP1-202ENST00000353411 OSBP2Q969R2 916 aa5.18□□□□□ -1.58
SKP1-202ENST00000353411 RMDN3Q96TC7 470 aa5.18□□□□□ -1.58
SKP1-202ENST00000353411 FAM118BQ9BPY3 351 aa5.18□□□□□ -1.58
SKP1-202ENST00000353411 NYXQ9GZU5 481 aa5.18□□□□□ -1.58
SKP1-202ENST00000353411 AASDHPPTQ9NRN7 309 aa5.18□□□□□ -1.58
SKP1-202ENST00000353411 ZNF510Q9Y2H8 683 aa5.18□□□□□ -1.58
SKP1-202ENST00000353411 KLRF2D3W0D1 207 aa5.18□□□□□ -1.58
SKP1-202ENST00000353411 FOXN3O00409 490 aaPredicted RBP5.18□□□□□ -1.58
SKP1-202ENST00000353411 NEMP1O14524 444 aa5.18□□□□□ -1.58
SKP1-202ENST00000353411 PRKD3O94806 890 aa5.18□□□□□ -1.58
SKP1-202ENST00000353411 UFL1O94874 794 aa5.18□□□□□ -1.58
SKP1-202ENST00000353411 NTRK1P04629 796 aa5.18□□□□□ -1.58
SKP1-202ENST00000353411 FDPSP14324 419 aaKnown RBP5.18□□□□□ -1.58
SKP1-202ENST00000353411 PRIM2P49643 509 aa5.18□□□□□ -1.58
SKP1-202ENST00000353411 DMP1Q13316 513 aaPredicted RBP5.18□□□□□ -1.58
SKP1-202ENST00000353411 PRKG1Q13976 671 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms