RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 PCDHB4Q9Y5E5 795 aa15.72■□□□□ 0.11
PTBP1-201ENST00000349038 TCRBV9S1A1TA0A576 114 aa15.71■□□□□ 0.11
PTBP1-201ENST00000349038 ALOX15BO15296 676 aa15.71■□□□□ 0.11
PTBP1-201ENST00000349038 CSDE1O75534 798 aaKnown RBP15.71■□□□□ 0.11
PTBP1-201ENST00000349038 ZNF24P17028 368 aa15.71■□□□□ 0.11
PTBP1-201ENST00000349038 SAT1P21673 171 aa15.71■□□□□ 0.11
PTBP1-201ENST00000349038 DSG3P32926 999 aa15.71■□□□□ 0.11
PTBP1-201ENST00000349038 HALP42357 657 aa15.71■□□□□ 0.11
PTBP1-201ENST00000349038 EN1Q05925 392 aaPredicted RBP15.71■□□□□ 0.11
PTBP1-201ENST00000349038 CES4AQ5XG92 561 aa15.71■□□□□ 0.11
PTBP1-201ENST00000349038 CDC42EP5Q6NZY7 148 aa15.71■□□□□ 0.11
PTBP1-201ENST00000349038 MYO1HQ8N1T3 1032 aa15.71■□□□□ 0.11
PTBP1-201ENST00000349038 TTC13Q8NBP0 860 aa15.71■□□□□ 0.11
PTBP1-201ENST00000349038 TMA16Q96EY4 203 aaKnown RBP15.71■□□□□ 0.11
PTBP1-201ENST00000349038 Q9H521 79 aa15.71■□□□□ 0.11
PTBP1-201ENST00000349038 C17orf75Q9HAS0 396 aa15.71■□□□□ 0.11
PTBP1-201ENST00000349038 WDR64B1ANS9 1081 aa15.71■□□□□ 0.11
PTBP1-201ENST00000349038 RAD17O75943 681 aa15.71■□□□□ 0.11
PTBP1-201ENST00000349038 ADRA2BP18089 450 aa15.71■□□□□ 0.11
PTBP1-201ENST00000349038 HOXD12P35452 270 aa15.71■□□□□ 0.11
PTBP1-201ENST00000349038 KLHL38Q2WGJ6 581 aa15.71■□□□□ 0.11
PTBP1-201ENST00000349038 MAP3K21Q5TCX8 1036 aa15.71■□□□□ 0.11
PTBP1-201ENST00000349038 LIN9Q5TKA1 542 aa15.71■□□□□ 0.11
PTBP1-201ENST00000349038 TMEM174Q8WUU8 243 aa15.71■□□□□ 0.11
PTBP1-201ENST00000349038 LXNQ9BS40 222 aa15.71■□□□□ 0.11
PTBP1-201ENST00000349038 SLC24A2Q9UI40 661 aa15.71■□□□□ 0.11
PTBP1-201ENST00000349038 RBBP6Q7Z6E9 1792 aaKnown RBP15.71■□□□□ 0.1
PTBP1-201ENST00000349038 CXorf49A8MYA2 514 aaPredicted RBP15.71■□□□□ 0.1
PTBP1-201ENST00000349038 TM9SF1O15321 606 aa15.71■□□□□ 0.1
PTBP1-201ENST00000349038 FAM58BPP0C7Q3 252 aa15.71■□□□□ 0.1
PTBP1-201ENST00000349038 OCM2P0CE71 109 aa15.71■□□□□ 0.1
PTBP1-201ENST00000349038 OCMP0CE72 109 aaPredicted RBP15.71■□□□□ 0.1
PTBP1-201ENST00000349038 ABCG1P45844 678 aa15.71■□□□□ 0.1
PTBP1-201ENST00000349038 SH3BGRP55822 239 aaPredicted RBP15.71■□□□□ 0.1
PTBP1-201ENST00000349038 KRT72Q14CN4 511 aa15.71■□□□□ 0.1
PTBP1-201ENST00000349038 PADI6Q6TGC4 694 aa15.71■□□□□ 0.1
PTBP1-201ENST00000349038 FRMD7Q6ZUT3 714 aa15.71■□□□□ 0.1
PTBP1-201ENST00000349038 APOPT1Q96IL0 206 aa15.71■□□□□ 0.1
PTBP1-201ENST00000349038 GIPC1O14908 333 aa15.7■□□□□ 0.1
PTBP1-201ENST00000349038 STRNO43815 780 aa15.7■□□□□ 0.1
PTBP1-201ENST00000349038 TPST1O60507 370 aa15.7■□□□□ 0.1
PTBP1-201ENST00000349038 DNAJA2O60884 412 aa15.7■□□□□ 0.1
PTBP1-201ENST00000349038 PROSCO94903 275 aa15.7■□□□□ 0.1
PTBP1-201ENST00000349038 MYBPC1Q00872 1141 aa15.7■□□□□ 0.1
PTBP1-201ENST00000349038 CENPCQ03188 943 aa15.7■□□□□ 0.1
PTBP1-201ENST00000349038 FLOT2Q14254 428 aa15.7■□□□□ 0.1
PTBP1-201ENST00000349038 ATG16L1Q676U5 607 aa15.7■□□□□ 0.1
PTBP1-201ENST00000349038 FAM196AQ6ZSG2 479 aa15.7■□□□□ 0.1
PTBP1-201ENST00000349038 DAW1Q8N136 415 aa15.7■□□□□ 0.1
PTBP1-201ENST00000349038 ZNF276Q8N554 614 aa15.7■□□□□ 0.1
PTBP1-201ENST00000349038 FAM213AQ9BRX8 229 aa15.7■□□□□ 0.1
PTBP1-201ENST00000349038 XAB2Q9HCS7 855 aaKnown RBP15.7■□□□□ 0.1
PTBP1-201ENST00000349038 SPATA7Q9P0W8 599 aa15.7■□□□□ 0.1
PTBP1-201ENST00000349038 ANKRD12Q6UB98 2062 aa15.7■□□□□ 0.1
PTBP1-201ENST00000349038 LTBP1Q14766 1721 aa15.7■□□□□ 0.1
PTBP1-201ENST00000349038 NR4A1P22736 598 aa15.7■□□□□ 0.1
PTBP1-201ENST00000349038 RFC1P35251 1148 aaPredicted RBP15.7■□□□□ 0.1
PTBP1-201ENST00000349038 CDKL1Q00532 357 aa15.7■□□□□ 0.1
PTBP1-201ENST00000349038 NFIAQ12857 509 aa15.7■□□□□ 0.1
PTBP1-201ENST00000349038 SEPT6Q14141 434 aa15.7■□□□□ 0.1
PTBP1-201ENST00000349038 SNRNP35Q16560 246 aaKnown RBP15.7■□□□□ 0.1
PTBP1-201ENST00000349038 RNASEH2BQ5TBB1 312 aaKnown RBP15.7■□□□□ 0.1
PTBP1-201ENST00000349038 RFX6Q8HWS3 928 aa15.7■□□□□ 0.1
PTBP1-201ENST00000349038 UNC45BQ8IWX7 931 aa15.7■□□□□ 0.1
PTBP1-201ENST00000349038 TTLL6Q8N841 843 aa15.7■□□□□ 0.1
PTBP1-201ENST00000349038 DCAKDQ8WVC6 231 aa15.7■□□□□ 0.1
PTBP1-201ENST00000349038 ATP2A3Q93084 1043 aa15.7■□□□□ 0.1
PTBP1-201ENST00000349038 NACC1Q96RE7 527 aa15.7■□□□□ 0.1
PTBP1-201ENST00000349038 RNPEPQ9H4A4 650 aa15.7■□□□□ 0.1
PTBP1-201ENST00000349038 PCDH18Q9HCL0 1135 aa15.7■□□□□ 0.1
PTBP1-201ENST00000349038 CNTNAP2Q9UHC6 1331 aa15.7■□□□□ 0.1
PTBP1-201ENST00000349038 AMHP03971 560 aa15.69■□□□□ 0.1
PTBP1-201ENST00000349038 STIP1P31948 543 aaKnown RBP15.69■□□□□ 0.1
PTBP1-201ENST00000349038 PRELPP51888 382 aa15.69■□□□□ 0.1
PTBP1-201ENST00000349038 STAT2P52630 851 aa15.69■□□□□ 0.1
PTBP1-201ENST00000349038 CLEC16AQ2KHT3 1053 aa15.69■□□□□ 0.1
PTBP1-201ENST00000349038 EFHC2Q5JST6 749 aa15.69■□□□□ 0.1
PTBP1-201ENST00000349038 RARS2Q5T160 578 aaKnown RBP15.69■□□□□ 0.1
PTBP1-201ENST00000349038 NPNTQ6UXI9 565 aa15.69■□□□□ 0.1
PTBP1-201ENST00000349038 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.69■□□□□ 0.1
PTBP1-201ENST00000349038 NAT16Q8N8M0 369 aa15.69■□□□□ 0.1
PTBP1-201ENST00000349038 SMYD1Q8NB12 490 aa15.69■□□□□ 0.1
PTBP1-201ENST00000349038 ZNF398Q8TD17 642 aa15.69■□□□□ 0.1
PTBP1-201ENST00000349038 CPT1BQ92523 772 aa15.69■□□□□ 0.1
PTBP1-201ENST00000349038 CDRT15Q96T59 188 aa15.69■□□□□ 0.1
PTBP1-201ENST00000349038 C1orf112Q9NSG2 853 aa15.69■□□□□ 0.1
PTBP1-201ENST00000349038 LDHAP00338 332 aaKnown RBP15.69■□□□□ 0.1
PTBP1-201ENST00000349038 APRTP07741 180 aa15.69■□□□□ 0.1
PTBP1-201ENST00000349038 ABHD2P08910 425 aa15.69■□□□□ 0.1
PTBP1-201ENST00000349038 P4HA1P13674 534 aa15.69■□□□□ 0.1
PTBP1-201ENST00000349038 EMP3P54852 163 aa15.69■□□□□ 0.1
PTBP1-201ENST00000349038 PPM1LQ5SGD2 360 aa15.69■□□□□ 0.1
PTBP1-201ENST00000349038 UNC5BQ8IZJ1 945 aa15.69■□□□□ 0.1
PTBP1-201ENST00000349038 EMC1Q8N766 993 aa15.69■□□□□ 0.1
PTBP1-201ENST00000349038 FNDC8Q8TC99 324 aa15.69■□□□□ 0.1
PTBP1-201ENST00000349038 FAF2Q96CS3 445 aa15.69■□□□□ 0.1
PTBP1-201ENST00000349038 OXCT2Q9BYC2 517 aaPredicted RBP15.69■□□□□ 0.1
PTBP1-201ENST00000349038 TRPV6Q9H1D0 765 aa15.69■□□□□ 0.1
PTBP1-201ENST00000349038 SIPA1L1O43166 1804 aa15.69■□□□□ 0.1
PTBP1-201ENST00000349038 ADAMTSL1Q8N6G6 1762 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms