RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 ARL5CA6NH57 179 aa9.67□□□□□ -0.86
ATG4A-202ENST00000345734 CYB561D2O14569 222 aa9.67□□□□□ -0.86
ATG4A-202ENST00000345734 ATP2C2O75185 946 aa9.67□□□□□ -0.86
ATG4A-202ENST00000345734 HOXD10P28358 340 aa9.67□□□□□ -0.86
ATG4A-202ENST00000345734 SCNN1GP51170 649 aa9.67□□□□□ -0.86
ATG4A-202ENST00000345734 PLTPP55058 493 aa9.67□□□□□ -0.86
ATG4A-202ENST00000345734 UAP1Q16222 522 aaPredicted RBP9.67□□□□□ -0.86
ATG4A-202ENST00000345734 TRIM71Q2Q1W2 868 aaKnown RBP9.67□□□□□ -0.86
ATG4A-202ENST00000345734 HSP90B2PQ58FF3 399 aa9.67□□□□□ -0.86
ATG4A-202ENST00000345734 KCNT1Q5JUK3 1230 aa9.67□□□□□ -0.86
ATG4A-202ENST00000345734 SPOCD1Q6ZMY3 1216 aa9.67□□□□□ -0.86
ATG4A-202ENST00000345734 RNF180Q86T96 592 aa9.67□□□□□ -0.86
ATG4A-202ENST00000345734 IQCKQ8N0W5 287 aa9.67□□□□□ -0.86
ATG4A-202ENST00000345734 GJD3Q8N144 294 aa9.67□□□□□ -0.86
ATG4A-202ENST00000345734 CRYBG2Q8N1P7 616 aa9.67□□□□□ -0.86
ATG4A-202ENST00000345734 OTUD6BQ8N6M0 293 aa9.67□□□□□ -0.86
ATG4A-202ENST00000345734 RNF169Q8NCN4 708 aa9.67□□□□□ -0.86
ATG4A-202ENST00000345734 FAM71BQ8TC56 605 aa9.67□□□□□ -0.86
ATG4A-202ENST00000345734 SLC35F5Q8WV83 523 aa9.67□□□□□ -0.86
ATG4A-202ENST00000345734 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.67□□□□□ -0.86
ATG4A-202ENST00000345734 DMRTB1Q96MA1 342 aa9.67□□□□□ -0.86
ATG4A-202ENST00000345734 CFHR5Q9BXR6 569 aa9.67□□□□□ -0.86
ATG4A-202ENST00000345734 GRIP2Q9C0E4 1043 aa9.67□□□□□ -0.86
ATG4A-202ENST00000345734 ZDHHC18Q9NUE0 388 aa9.67□□□□□ -0.86
ATG4A-202ENST00000345734 VPS18Q9P253 973 aa9.67□□□□□ -0.86
ATG4A-202ENST00000345734 PCSK1NQ9UHG2 260 aa9.67□□□□□ -0.86
ATG4A-202ENST00000345734 FRMPD3Q5JV73 1810 aa9.67□□□□□ -0.86
ATG4A-202ENST00000345734 LRRD1A4D1F6 860 aa9.67□□□□□ -0.86
ATG4A-202ENST00000345734 C3orf70A6NLC5 250 aaPredicted RBP9.67□□□□□ -0.86
ATG4A-202ENST00000345734 PODXLO00592 558 aa9.67□□□□□ -0.86
ATG4A-202ENST00000345734 HUS1O60921 280 aa9.67□□□□□ -0.86
ATG4A-202ENST00000345734 HSF2BPO75031 334 aa9.67□□□□□ -0.86
ATG4A-202ENST00000345734 ECEL1O95672 775 aa9.67□□□□□ -0.86
ATG4A-202ENST00000345734 ACAT1P24752 427 aaKnown RBP9.67□□□□□ -0.86
ATG4A-202ENST00000345734 TKTP29401 623 aaKnown RBP9.67□□□□□ -0.86
ATG4A-202ENST00000345734 MIPP30301 263 aa9.67□□□□□ -0.86
ATG4A-202ENST00000345734 HSD17B3P37058 310 aa9.67□□□□□ -0.86
ATG4A-202ENST00000345734 CLCNKBP51801 687 aa9.67□□□□□ -0.86
ATG4A-202ENST00000345734 HTRA3P83110 453 aa9.67□□□□□ -0.86
ATG4A-202ENST00000345734 PPP1R7Q15435 360 aa9.67□□□□□ -0.86
ATG4A-202ENST00000345734 TRIP13Q15645 432 aaPredicted RBP9.67□□□□□ -0.86
ATG4A-202ENST00000345734 C15orf59Q2T9L4 293 aaPredicted RBP9.67□□□□□ -0.86
ATG4A-202ENST00000345734 ALS2CLQ60I27 953 aa9.67□□□□□ -0.86
ATG4A-202ENST00000345734 WSCD1Q658N2 575 aa9.67□□□□□ -0.86
ATG4A-202ENST00000345734 FBXO25Q8TCJ0 367 aa9.67□□□□□ -0.86
ATG4A-202ENST00000345734 SLC2A14Q8TDB8 520 aa9.67□□□□□ -0.86
ATG4A-202ENST00000345734 MAIP1Q8WWC4 291 aa9.67□□□□□ -0.86
ATG4A-202ENST00000345734 RXFP2Q8WXD0 754 aa9.67□□□□□ -0.86
ATG4A-202ENST00000345734 RBM41Q96IZ5 413 aaKnown RBP9.67□□□□□ -0.86
ATG4A-202ENST00000345734 PAAF1Q9BRP4 392 aa9.67□□□□□ -0.86
ATG4A-202ENST00000345734 B3GNT5Q9BYG0 378 aa9.67□□□□□ -0.86
ATG4A-202ENST00000345734 TRPV6Q9H1D0 765 aa9.67□□□□□ -0.86
ATG4A-202ENST00000345734 HESX1Q9UBX0 185 aa9.67□□□□□ -0.86
ATG4A-202ENST00000345734 hCG_1818297A0A087WSY0 165 aa9.66□□□□□ -0.86
ATG4A-202ENST00000345734 CASTOR2A6NHX0 329 aa9.66□□□□□ -0.86
ATG4A-202ENST00000345734 C2CD4BA6NLJ0 364 aa9.66□□□□□ -0.86
ATG4A-202ENST00000345734 PPP1R12AO14974 1030 aaPredicted RBP9.66□□□□□ -0.86
ATG4A-202ENST00000345734 PAPSS1O43252 624 aaPredicted RBP9.66□□□□□ -0.86
ATG4A-202ENST00000345734 THP07101 528 aa9.66□□□□□ -0.86
ATG4A-202ENST00000345734 CD48P09326 243 aa9.66□□□□□ -0.86
ATG4A-202ENST00000345734 GPD1P21695 349 aa9.66□□□□□ -0.86
ATG4A-202ENST00000345734 WARSP23381 471 aaKnown RBP9.66□□□□□ -0.86
ATG4A-202ENST00000345734 CDKN2BP42772 138 aa9.66□□□□□ -0.86
ATG4A-202ENST00000345734 VEGFBP49765 207 aa9.66□□□□□ -0.86
ATG4A-202ENST00000345734 ZNF143P52747 638 aaPredicted RBP9.66□□□□□ -0.86
ATG4A-202ENST00000345734 DRG2P55039 364 aaKnown RBP9.66□□□□□ -0.86
ATG4A-202ENST00000345734 HNRNPH2P55795 449 aaKnown RBP9.66□□□□□ -0.86
ATG4A-202ENST00000345734 KRT17Q04695 432 aa9.66□□□□□ -0.86
ATG4A-202ENST00000345734 POU4F2Q12837 409 aa9.66□□□□□ -0.86
ATG4A-202ENST00000345734 CFAP58Q5T655 872 aa9.66□□□□□ -0.86
ATG4A-202ENST00000345734 OLFML1Q6UWY5 402 aa9.66□□□□□ -0.86
ATG4A-202ENST00000345734 MRPL10Q7Z7H8 261 aaKnown RBP9.66□□□□□ -0.86
ATG4A-202ENST00000345734 TMEM110Q86TL2 294 aa9.66□□□□□ -0.86
ATG4A-202ENST00000345734 HACE1Q8IYU2 909 aa9.66□□□□□ -0.86
ATG4A-202ENST00000345734 TOP6BLQ8N6T0 577 aa9.66□□□□□ -0.86
ATG4A-202ENST00000345734 C3orf58Q8NDZ4 430 aa9.66□□□□□ -0.86
ATG4A-202ENST00000345734 RNF217Q8TC41 542 aa9.66□□□□□ -0.86
ATG4A-202ENST00000345734 CLEC4CQ8WTT0 213 aa9.66□□□□□ -0.86
ATG4A-202ENST00000345734 SLCO2A1Q92959 643 aa9.66□□□□□ -0.86
ATG4A-202ENST00000345734 HAUS1Q96CS2 278 aa9.66□□□□□ -0.86
ATG4A-202ENST00000345734 RUNDC3BQ96NL0 473 aa9.66□□□□□ -0.86
ATG4A-202ENST00000345734 PEBP4Q96S96 227 aa9.66□□□□□ -0.86
ATG4A-202ENST00000345734 FMO2Q99518 471 aa9.66□□□□□ -0.86
ATG4A-202ENST00000345734 SH3GL2Q99962 352 aa9.66□□□□□ -0.86
ATG4A-202ENST00000345734 MIS12Q9H081 205 aa9.66□□□□□ -0.86
ATG4A-202ENST00000345734 DDX56Q9NY93 547 aaKnown RBP9.66□□□□□ -0.86
ATG4A-202ENST00000345734 CWC15Q9P013 229 aaKnown RBP9.66□□□□□ -0.86
ATG4A-202ENST00000345734 GIT1Q9Y2X7 761 aa9.66□□□□□ -0.86
ATG4A-202ENST00000345734 RPLP2P05387 115 aaKnown RBP9.65□□□□□ -0.86
ATG4A-202ENST00000345734 SETSIPP0DME0 302 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 PDGFRAP16234 1089 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 MZF1P28698 734 aaPredicted RBP9.65□□□□□ -0.86
ATG4A-202ENST00000345734 CCNG2Q16589 344 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 CDO1Q16878 200 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 ODF2Q5BJF6 829 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 KIAA0319Q5VV43 1072 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 EP400NLQ6ZTU2 488 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 TMC3Q7Z5M5 1100 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 POLNQ7Z5Q5 900 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 PRUNE1Q86TP1 453 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms