RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 BHLHE22Q8NFJ8 381 aaPredicted RBP18.62■□□□□ 0.57
SMC4-201ENST00000344722 ZBED2Q9BTP6 218 aa18.62■□□□□ 0.57
SMC4-201ENST00000344722 IMPAD1Q9NX62 359 aa18.62■□□□□ 0.57
SMC4-201ENST00000344722 UBAP1LF5GYI3 381 aa18.62■□□□□ 0.57
SMC4-201ENST00000344722 ZNF862O60290 1169 aa18.62■□□□□ 0.57
SMC4-201ENST00000344722 MOCS2O96007 188 aaPredicted RBP18.62■□□□□ 0.57
SMC4-201ENST00000344722 FESP07332 822 aa18.62■□□□□ 0.57
SMC4-201ENST00000344722 FOLH1Q04609 750 aa18.62■□□□□ 0.57
SMC4-201ENST00000344722 CLEC10AQ8IUN9 316 aa18.62■□□□□ 0.57
SMC4-201ENST00000344722 UBA3Q8TBC4 463 aa18.62■□□□□ 0.57
SMC4-201ENST00000344722 A8MUI8 341 aa18.61■□□□□ 0.57
SMC4-201ENST00000344722 SOAT2O75908 522 aa18.61■□□□□ 0.57
SMC4-201ENST00000344722 C4BPBP20851 252 aa18.61■□□□□ 0.57
SMC4-201ENST00000344722 PTPN7P35236 360 aa18.61■□□□□ 0.57
SMC4-201ENST00000344722 RPS6KA3P51812 740 aa18.61■□□□□ 0.57
SMC4-201ENST00000344722 GTF2H3Q13889 308 aa18.61■□□□□ 0.57
SMC4-201ENST00000344722 GRTP1Q5TC63 336 aa18.61■□□□□ 0.57
SMC4-201ENST00000344722 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.61■□□□□ 0.57
SMC4-201ENST00000344722 IPMKQ8NFU5 416 aa18.61■□□□□ 0.57
SMC4-201ENST00000344722 FAM53CQ9NYF3 392 aa18.61■□□□□ 0.57
SMC4-201ENST00000344722 TUBGCP4Q9UGJ1 667 aa18.61■□□□□ 0.57
SMC4-201ENST00000344722 CYP2C8P10632 490 aa18.61■□□□□ 0.57
SMC4-201ENST00000344722 NR1D2Q14995 579 aa18.61■□□□□ 0.57
SMC4-201ENST00000344722 SAMD4BQ5PRF9 694 aaKnown RBP18.61■□□□□ 0.57
SMC4-201ENST00000344722 BTBD8Q5XKL5 378 aa18.61■□□□□ 0.57
SMC4-201ENST00000344722 KATNAL2Q8IYT4 538 aa18.61■□□□□ 0.57
SMC4-201ENST00000344722 AP5M1Q9H0R1 490 aa18.61■□□□□ 0.57
SMC4-201ENST00000344722 ACOT9Q9Y305 439 aa18.61■□□□□ 0.57
SMC4-201ENST00000344722 ZNF197O14709 1029 aa18.61■□□□□ 0.57
SMC4-201ENST00000344722 KLRC4O43908 158 aa18.61■□□□□ 0.57
SMC4-201ENST00000344722 ANXA9O76027 345 aa18.61■□□□□ 0.57
SMC4-201ENST00000344722 GARTP22102 1010 aa18.61■□□□□ 0.57
SMC4-201ENST00000344722 NKX1-1Q15270 411 aaPredicted RBP18.61■□□□□ 0.57
SMC4-201ENST00000344722 GOLGA7BQ2TAP0 167 aa18.61■□□□□ 0.57
SMC4-201ENST00000344722 ARMC4Q5T2S8 1044 aa18.61■□□□□ 0.57
SMC4-201ENST00000344722 ABRAQ8N0Z2 381 aa18.61■□□□□ 0.57
SMC4-201ENST00000344722 BLOC1S4Q9NUP1 217 aa18.61■□□□□ 0.57
SMC4-201ENST00000344722 TSR3Q9UJK0 312 aaKnown RBP18.61■□□□□ 0.57
SMC4-201ENST00000344722 SNX9Q9Y5X1 595 aa18.61■□□□□ 0.57
SMC4-201ENST00000344722 TCRBV5S4A2TA0A5A2 114 aa18.61■□□□□ 0.57
SMC4-201ENST00000344722 LDLRP01130 860 aa18.61■□□□□ 0.57
SMC4-201ENST00000344722 MYL4P12829 197 aa18.61■□□□□ 0.57
SMC4-201ENST00000344722 TSHRP16473 764 aa18.61■□□□□ 0.57
SMC4-201ENST00000344722 SLC25A3Q00325 362 aa18.61■□□□□ 0.57
SMC4-201ENST00000344722 TLK2Q86UE8 772 aa18.61■□□□□ 0.57
SMC4-201ENST00000344722 ULK2Q8IYT8 1036 aa18.61■□□□□ 0.57
SMC4-201ENST00000344722 RDM1Q8NG50 284 aa18.61■□□□□ 0.57
SMC4-201ENST00000344722 SH3TC2Q8TF17 1288 aa18.61■□□□□ 0.57
SMC4-201ENST00000344722 VPS33AQ96AX1 596 aa18.61■□□□□ 0.57
SMC4-201ENST00000344722 GPAMQ9HCL2 828 aa18.61■□□□□ 0.57
SMC4-201ENST00000344722 GALNT8Q9NY28 637 aa18.61■□□□□ 0.57
SMC4-201ENST00000344722 DNPEPQ9ULA0 475 aa18.61■□□□□ 0.57
SMC4-201ENST00000344722 USP18Q9UMW8 372 aa18.61■□□□□ 0.57
SMC4-201ENST00000344722 EPHB6O15197 1021 aa18.6■□□□□ 0.57
SMC4-201ENST00000344722 MFN2O95140 757 aa18.6■□□□□ 0.57
SMC4-201ENST00000344722 EIF2S1P05198 315 aaKnown RBP18.6■□□□□ 0.57
SMC4-201ENST00000344722 RBP1P09455 135 aa18.6■□□□□ 0.57
SMC4-201ENST00000344722 PSMB9P28065 219 aa18.6■□□□□ 0.57
SMC4-201ENST00000344722 STAT5BP51692 787 aa18.6■□□□□ 0.57
SMC4-201ENST00000344722 ARPP19P56211 112 aa18.6■□□□□ 0.57
SMC4-201ENST00000344722 NAB1Q13506 487 aa18.6■□□□□ 0.57
SMC4-201ENST00000344722 ACVR2BQ13705 512 aa18.6■□□□□ 0.57
SMC4-201ENST00000344722 ABI1Q8IZP0 508 aa18.6■□□□□ 0.57
SMC4-201ENST00000344722 PRELID2Q8N945 189 aa18.6■□□□□ 0.57
SMC4-201ENST00000344722 ACAD9Q9H845 621 aa18.6■□□□□ 0.57
SMC4-201ENST00000344722 R3HDM2Q9Y2K5 976 aaKnown RBP18.6■□□□□ 0.57
SMC4-201ENST00000344722 PNMA8CA0A1B0GUJ8 204 aa18.6■□□□□ 0.57
SMC4-201ENST00000344722 GLRBP48167 497 aa18.6■□□□□ 0.57
SMC4-201ENST00000344722 SUPT20HL1Q3ZLR7 823 aa18.6■□□□□ 0.57
SMC4-201ENST00000344722 CAMK1DQ8IU85 385 aa18.6■□□□□ 0.57
SMC4-201ENST00000344722 TAS1R2Q8TE23 839 aa18.6■□□□□ 0.57
SMC4-201ENST00000344722 RSPH1Q8WYR4 309 aa18.6■□□□□ 0.57
SMC4-201ENST00000344722 RORBQ92753 470 aa18.6■□□□□ 0.57
SMC4-201ENST00000344722 IARS2Q9NSE4 1012 aaKnown RBP18.6■□□□□ 0.57
SMC4-201ENST00000344722 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.6■□□□□ 0.575e-6■■■□□ 17.5
SMC4-201ENST00000344722 STK39Q9UEW8 545 aa18.6■□□□□ 0.57
SMC4-201ENST00000344722 LMTK3Q96Q04 1460 aa18.6■□□□□ 0.57
SMC4-201ENST00000344722 MAPK11Q15759 364 aa18.6■□□□□ 0.57
SMC4-201ENST00000344722 MFSD5Q6N075 450 aa18.6■□□□□ 0.57
SMC4-201ENST00000344722 ARHGEF19Q8IW93 802 aa18.6■□□□□ 0.57
SMC4-201ENST00000344722 GANQ9H2C0 597 aa18.6■□□□□ 0.57
SMC4-201ENST00000344722 RBAK-RBAKDNI3L0D1 243 aa18.6■□□□□ 0.57
SMC4-201ENST00000344722 LIN52Q52LA3 116 aa18.6■□□□□ 0.57
SMC4-201ENST00000344722 PIWIL2Q8TC59 973 aaKnown RBP18.6■□□□□ 0.57
SMC4-201ENST00000344722 STN1Q9H668 368 aaKnown RBP18.6■□□□□ 0.57
SMC4-201ENST00000344722 COMMD8Q9NX08 183 aa18.6■□□□□ 0.57
SMC4-201ENST00000344722 EURLQ9NYK6 297 aa18.6■□□□□ 0.57
SMC4-201ENST00000344722 JAK1P23458 1154 aa18.59■□□□□ 0.57
SMC4-201ENST00000344722 Q3C1V9 767 aa18.59■□□□□ 0.57
SMC4-201ENST00000344722 CIAPIN1Q6FI81 312 aa18.59■□□□□ 0.57
SMC4-201ENST00000344722 FBXW8Q8N3Y1 598 aa18.59■□□□□ 0.57
SMC4-201ENST00000344722 ZNF408Q9H9D4 720 aa18.59■□□□□ 0.57
SMC4-201ENST00000344722 AFF4Q9UHB7 1163 aaKnown RBP18.59■□□□□ 0.57
SMC4-201ENST00000344722 EIF3LQ9Y262 564 aaKnown RBP18.59■□□□□ 0.57
SMC4-201ENST00000344722 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.59■□□□□ 0.57
SMC4-201ENST00000344722 C5orf58C9J3I9 102 aa18.59■□□□□ 0.57
SMC4-201ENST00000344722 MAPTP10636 758 aaKnown RBP18.59■□□□□ 0.57
SMC4-201ENST00000344722 RARBP10826 455 aa18.59■□□□□ 0.57
SMC4-201ENST00000344722 ZNF268Q14587 947 aaPredicted RBP18.59■□□□□ 0.57
SMC4-201ENST00000344722 FAM98BQ52LJ0 330 aaKnown RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms