RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 WDR24Q96S15 920 aa16.97■□□□□ 0.31
SMARCA4-201ENST00000344626 ABCC13Q9NSE7 274 aa16.97■□□□□ 0.31
SMARCA4-201ENST00000344626 MARCH2Q9P0N8 246 aa16.97■□□□□ 0.31
SMARCA4-201ENST00000344626 PMPCBO75439 489 aa16.97■□□□□ 0.31
SMARCA4-201ENST00000344626 FNTAP49354 379 aa16.97■□□□□ 0.31
SMARCA4-201ENST00000344626 DUSP4Q13115 394 aa16.97■□□□□ 0.31
SMARCA4-201ENST00000344626 PITPNM3Q9BZ71 974 aa16.97■□□□□ 0.31
SMARCA4-201ENST00000344626 TRIM45Q9H8W5 580 aaPredicted RBP16.97■□□□□ 0.31
SMARCA4-201ENST00000344626 A0A087X0B3 334 aa16.97■□□□□ 0.31
SMARCA4-201ENST00000344626 F8VP50 259 aa16.97■□□□□ 0.31
SMARCA4-201ENST00000344626 ERMARDQ5T6L9 678 aa16.97■□□□□ 0.31
SMARCA4-201ENST00000344626 E4F1Q66K89 784 aaPredicted RBP16.97■□□□□ 0.31
SMARCA4-201ENST00000344626 SLC9A9Q8IVB4 645 aa16.97■□□□□ 0.31
SMARCA4-201ENST00000344626 GPR152Q8TDT2 470 aa16.97■□□□□ 0.31
SMARCA4-201ENST00000344626 ELMO2Q96JJ3 720 aa16.97■□□□□ 0.31
SMARCA4-201ENST00000344626 EFHD1Q9BUP0 239 aa16.97■□□□□ 0.31
SMARCA4-201ENST00000344626 VAV3Q9UKW4 847 aa16.97■□□□□ 0.31
SMARCA4-201ENST00000344626 LUC7L3O95232 432 aaKnown RBP16.97■□□□□ 0.31
SMARCA4-201ENST00000344626 PMS1P54277 932 aaKnown RBP16.97■□□□□ 0.31
SMARCA4-201ENST00000344626 HECTD3Q5T447 861 aa16.97■□□□□ 0.31
SMARCA4-201ENST00000344626 UGT3A1Q6NUS8 523 aa16.97■□□□□ 0.31
SMARCA4-201ENST00000344626 NUDCD3Q8IVD9 361 aa16.97■□□□□ 0.31
SMARCA4-201ENST00000344626 KPNA3O00505 521 aaPredicted RBP16.97■□□□□ 0.31
SMARCA4-201ENST00000344626 USP17L7P0C7H9 530 aa16.97■□□□□ 0.31
SMARCA4-201ENST00000344626 PSEN1P49768 467 aa16.97■□□□□ 0.31
SMARCA4-201ENST00000344626 LBRQ14739 615 aaKnown RBP16.97■□□□□ 0.31
SMARCA4-201ENST00000344626 TRADDQ15628 312 aa16.97■□□□□ 0.31
SMARCA4-201ENST00000344626 SH3RF1Q7Z6J0 888 aa16.97■□□□□ 0.31
SMARCA4-201ENST00000344626 SERPINI1Q99574 410 aa16.97■□□□□ 0.31
SMARCA4-201ENST00000344626 YIPF2Q9BWQ6 316 aa16.97■□□□□ 0.31
SMARCA4-201ENST00000344626 NIFKQ9BYG3 293 aaKnown RBP16.97■□□□□ 0.31
SMARCA4-201ENST00000344626 G3BP2Q9UN86 482 aaKnown RBP16.97■□□□□ 0.31
SMARCA4-201ENST00000344626 FNDC3BQ53EP0 1204 aaKnown RBP16.96■□□□□ 0.31
SMARCA4-201ENST00000344626 HYIQ5T013 277 aa16.96■□□□□ 0.31
SMARCA4-201ENST00000344626 ANGPTL8Q6UXH0 198 aa16.96■□□□□ 0.31
SMARCA4-201ENST00000344626 ARHGEF19Q8IW93 802 aa16.96■□□□□ 0.31
SMARCA4-201ENST00000344626 MCOLN2Q8IZK6 566 aa16.96■□□□□ 0.31
SMARCA4-201ENST00000344626 LZTR1Q8N653 840 aa16.96■□□□□ 0.31
SMARCA4-201ENST00000344626 SLC13A1Q9BZW2 595 aa16.96■□□□□ 0.31
SMARCA4-201ENST00000344626 SPATA31C1P0DKV0 1188 aa16.96■□□□□ 0.31
SMARCA4-201ENST00000344626 USP10Q14694 798 aaKnown RBP16.96■□□□□ 0.31
SMARCA4-201ENST00000344626 RD3Q7Z3Z2 195 aa16.96■□□□□ 0.31
SMARCA4-201ENST00000344626 JAMLQ86YT9 394 aa16.96■□□□□ 0.31
SMARCA4-201ENST00000344626 SPATA16Q9BXB7 569 aa16.96■□□□□ 0.31
SMARCA4-201ENST00000344626 ADGRE3Q9BY15 652 aa16.96■□□□□ 0.31
SMARCA4-201ENST00000344626 POPDC2Q9HBU9 364 aa16.96■□□□□ 0.31
SMARCA4-201ENST00000344626 GPATCH2LQ9NWQ4 482 aa16.96■□□□□ 0.31
SMARCA4-201ENST00000344626 SLC6A3Q01959 620 aa16.96■□□□□ 0.31
SMARCA4-201ENST00000344626 KIAA1324Q6UXG2 1013 aaKnown RBP16.96■□□□□ 0.31
SMARCA4-201ENST00000344626 CEP68Q76N32 757 aa16.96■□□□□ 0.31
SMARCA4-201ENST00000344626 DSG4Q86SJ6 1040 aa16.96■□□□□ 0.31
SMARCA4-201ENST00000344626 CCNJLQ8IV13 435 aa16.96■□□□□ 0.31
SMARCA4-201ENST00000344626 SCUBE3Q8IX30 993 aa16.96■□□□□ 0.31
SMARCA4-201ENST00000344626 EXD1Q8NHP7 514 aa16.96■□□□□ 0.31
SMARCA4-201ENST00000344626 SLC20A1Q8WUM9 679 aa16.96■□□□□ 0.31
SMARCA4-201ENST00000344626 GNGT2O14610 69 aa16.96■□□□□ 0.3
SMARCA4-201ENST00000344626 VCLP18206 1134 aa16.96■□□□□ 0.3
SMARCA4-201ENST00000344626 SMARCB1Q12824 385 aa16.96■□□□□ 0.3
SMARCA4-201ENST00000344626 TTLL9Q3SXZ7 439 aa16.96■□□□□ 0.3
SMARCA4-201ENST00000344626 NUGGCQ68CJ6 796 aa16.96■□□□□ 0.3
SMARCA4-201ENST00000344626 DDX42Q86XP3 938 aaKnown RBP eCLIP16.96■□□□□ 0.3
SMARCA4-201ENST00000344626 BRD8Q9H0E9 1235 aa16.96■□□□□ 0.3
SMARCA4-201ENST00000344626 TRIM10Q9UDY6 481 aa16.96■□□□□ 0.3
SMARCA4-201ENST00000344626 GTF2IRD1Q9UHL9 959 aa16.96■□□□□ 0.3
SMARCA4-201ENST00000344626 FBXL5Q9UKA1 691 aa16.96■□□□□ 0.3
SMARCA4-201ENST00000344626 OR6C75A6NL08 312 aa16.95■□□□□ 0.3
SMARCA4-201ENST00000344626 PRPF4O43172 522 aaKnown RBP eCLIP16.95■□□□□ 0.3
SMARCA4-201ENST00000344626 BRAFP15056 766 aa16.95■□□□□ 0.3
SMARCA4-201ENST00000344626 COILP38432 576 aaPredicted RBP16.95■□□□□ 0.3
SMARCA4-201ENST00000344626 DDR2Q16832 855 aa16.95■□□□□ 0.3
SMARCA4-201ENST00000344626 ZNF284Q2VY69 593 aa16.95■□□□□ 0.3
SMARCA4-201ENST00000344626 TMEM63BQ5T3F8 832 aa16.95■□□□□ 0.3
SMARCA4-201ENST00000344626 LRRC52Q8N7C0 313 aa16.95■□□□□ 0.3
SMARCA4-201ENST00000344626 ATXN7L3BQ96GX2 97 aa16.95■□□□□ 0.3
SMARCA4-201ENST00000344626 ULBP1Q9BZM6 244 aa16.95■□□□□ 0.3
SMARCA4-201ENST00000344626 USH1CQ9Y6N9 552 aa16.95■□□□□ 0.3
SMARCA4-201ENST00000344626 URB1O60287 2271 aaKnown RBP16.95■□□□□ 0.3
SMARCA4-201ENST00000344626 ZNF185O15231 689 aa16.95■□□□□ 0.3
SMARCA4-201ENST00000344626 ATP5BP06576 529 aaKnown RBP16.95■□□□□ 0.3
SMARCA4-201ENST00000344626 PLEKP08567 350 aaPredicted RBP16.95■□□□□ 0.3
SMARCA4-201ENST00000344626 ACAP1Q15027 740 aa16.95■□□□□ 0.3
SMARCA4-201ENST00000344626 KCNT1Q5JUK3 1230 aa16.95■□□□□ 0.3
SMARCA4-201ENST00000344626 ZNF571Q7Z3V5 609 aaPredicted RBP16.95■□□□□ 0.3
SMARCA4-201ENST00000344626 CCDC33Q8N5R6 958 aa16.95■□□□□ 0.3
SMARCA4-201ENST00000344626 PBX3P40426 434 aa16.95■□□□□ 0.3
SMARCA4-201ENST00000344626 TARBP2Q15633 366 aaKnown RBP16.95■□□□□ 0.3
SMARCA4-201ENST00000344626 TMC5Q6UXY8 1006 aa16.95■□□□□ 0.3
SMARCA4-201ENST00000344626 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.95■□□□□ 0.3
SMARCA4-201ENST00000344626 TXLNGQ9NUQ3 528 aa16.95■□□□□ 0.3
SMARCA4-201ENST00000344626 NCKAP1Q9Y2A7 1128 aa16.95■□□□□ 0.3
SMARCA4-201ENST00000344626 TXNDC9O14530 226 aa16.95■□□□□ 0.3
SMARCA4-201ENST00000344626 CASQ2O14958 399 aaPredicted RBP16.95■□□□□ 0.3
SMARCA4-201ENST00000344626 RAMP2O60895 175 aa16.95■□□□□ 0.3
SMARCA4-201ENST00000344626 ANP32DO95626 131 aa16.95■□□□□ 0.3
SMARCA4-201ENST00000344626 LTFP02788 710 aa16.95■□□□□ 0.3
SMARCA4-201ENST00000344626 MAPK8IP2Q13387 824 aaPredicted RBP16.95■□□□□ 0.3
SMARCA4-201ENST00000344626 MRNIPQ6NTE8 343 aa16.95■□□□□ 0.3
SMARCA4-201ENST00000344626 ATAD1Q8NBU5 361 aa16.95■□□□□ 0.3
SMARCA4-201ENST00000344626 SKA1Q96BD8 255 aa16.95■□□□□ 0.3
SMARCA4-201ENST00000344626 DUSP9Q99956 384 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms