RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 KIAA0100Q14667 2235 aaKnown RBP14.03□□□□□ -0.16
TRIO-202ENST00000344204 GSC2O15499 205 aa14.03□□□□□ -0.16
TRIO-202ENST00000344204 ITGA1P56199 1179 aa14.03□□□□□ -0.16
TRIO-202ENST00000344204 PURAQ00577 322 aaKnown RBP14.03□□□□□ -0.16
TRIO-202ENST00000344204 NCOA4Q13772 614 aa14.03□□□□□ -0.16
TRIO-202ENST00000344204 C11orf74Q86VG3 221 aa14.03□□□□□ -0.16
TRIO-202ENST00000344204 C8orf59Q8N0T1 100 aaPredicted RBP14.03□□□□□ -0.16
TRIO-202ENST00000344204 CRNNQ9UBG3 495 aaPredicted RBP14.03□□□□□ -0.16
TRIO-202ENST00000344204 PRKAG3Q9UGI9 489 aa14.03□□□□□ -0.16
TRIO-202ENST00000344204 SLC39A10Q9ULF5 831 aa14.03□□□□□ -0.16
TRIO-202ENST00000344204 USP17L3A6NCW0 530 aa14.03□□□□□ -0.16
TRIO-202ENST00000344204 USP17L4A6NCW7 530 aa14.03□□□□□ -0.16
TRIO-202ENST00000344204 MYO1DO94832 1006 aa14.03□□□□□ -0.16
TRIO-202ENST00000344204 CCND2P30279 289 aa14.03□□□□□ -0.16
TRIO-202ENST00000344204 UBE2SQ16763 222 aa14.03□□□□□ -0.16
TRIO-202ENST00000344204 USP17L1Q7RTZ2 530 aa14.03□□□□□ -0.16
TRIO-202ENST00000344204 SLC26A11Q86WA9 606 aa14.03□□□□□ -0.16
TRIO-202ENST00000344204 PON1P27169 355 aa14.03□□□□□ -0.16
TRIO-202ENST00000344204 C4orf22Q6V702 233 aa14.03□□□□□ -0.16
TRIO-202ENST00000344204 CDRT15Q96T59 188 aa14.03□□□□□ -0.16
TRIO-202ENST00000344204 ELMO2Q96JJ3 720 aa14.03□□□□□ -0.16
TRIO-202ENST00000344204 DCXO43602 365 aa14.03□□□□□ -0.16
TRIO-202ENST00000344204 ABCB1P08183 1280 aaPredicted RBP14.03□□□□□ -0.16
TRIO-202ENST00000344204 WDR36Q8NI36 951 aaKnown RBP14.03□□□□□ -0.16
TRIO-202ENST00000344204 IL25Q9H293 177 aa14.03□□□□□ -0.16
TRIO-202ENST00000344204 TRMT13Q9NUP7 481 aaKnown RBP14.03□□□□□ -0.16
TRIO-202ENST00000344204 SUPT3HB4E1H0 165 aa14.03□□□□□ -0.16
TRIO-202ENST00000344204 S100A6P06703 90 aa14.03□□□□□ -0.16
TRIO-202ENST00000344204 TPBGLP0DKB5 382 aa14.03□□□□□ -0.16
TRIO-202ENST00000344204 RAB25P57735 213 aa14.03□□□□□ -0.16
TRIO-202ENST00000344204 C1DQ13901 141 aaKnown RBP14.03□□□□□ -0.16
TRIO-202ENST00000344204 MFSD14BQ5SR56 506 aa14.03□□□□□ -0.16
TRIO-202ENST00000344204 OTUD3Q5T2D3 398 aaPredicted RBP14.03□□□□□ -0.16
TRIO-202ENST00000344204 RWDD4Q6NW29 188 aaKnown RBP14.03□□□□□ -0.16
TRIO-202ENST00000344204 PRR23BQ6ZRT6 265 aa14.03□□□□□ -0.16
TRIO-202ENST00000344204 GALNT6Q8NCL4 622 aa14.03□□□□□ -0.16
TRIO-202ENST00000344204 TINF2Q9BSI4 451 aa14.03□□□□□ -0.16
TRIO-202ENST00000344204 NUAK2Q9H093 628 aa14.03□□□□□ -0.16
TRIO-202ENST00000344204 EYA4O95677 639 aa14.03□□□□□ -0.16
TRIO-202ENST00000344204 BNIP1Q12981 228 aa14.03□□□□□ -0.16
TRIO-202ENST00000344204 NFX1Q12986 1120 aaKnown RBP14.03□□□□□ -0.16
TRIO-202ENST00000344204 ACVR2BQ13705 512 aa14.03□□□□□ -0.16
TRIO-202ENST00000344204 TTLL12Q14166 644 aaPredicted RBP14.03□□□□□ -0.16
TRIO-202ENST00000344204 ZNF284Q2VY69 593 aa14.03□□□□□ -0.16
TRIO-202ENST00000344204 NEK10Q6ZWH5 1172 aa14.03□□□□□ -0.16
TRIO-202ENST00000344204 VPS33AQ96AX1 596 aa14.03□□□□□ -0.16
TRIO-202ENST00000344204 LOXHD1Q8IVV2 1947 aa14.02□□□□□ -0.16
TRIO-202ENST00000344204 NCAPD2Q15021 1401 aa14.02□□□□□ -0.16
TRIO-202ENST00000344204 NADKO95544 446 aaPredicted RBP14.02□□□□□ -0.16
TRIO-202ENST00000344204 PKNOX1P55347 436 aa14.02□□□□□ -0.16
TRIO-202ENST00000344204 OR6P1Q8NGX9 317 aa14.02□□□□□ -0.16
TRIO-202ENST00000344204 UGT1A9O60656 530 aa14.02□□□□□ -0.16
TRIO-202ENST00000344204 UGT1A6P19224 532 aa14.02□□□□□ -0.16
TRIO-202ENST00000344204 UGT1A1P22309 533 aa14.02□□□□□ -0.16
TRIO-202ENST00000344204 UGT1A4P22310 534 aa14.02□□□□□ -0.16
TRIO-202ENST00000344204 RPA1P27694 616 aa14.02□□□□□ -0.16
TRIO-202ENST00000344204 UGT1A3P35503 534 aa14.02□□□□□ -0.16
TRIO-202ENST00000344204 UGT1A5P35504 534 aa14.02□□□□□ -0.16
TRIO-202ENST00000344204 RAP1GAPP47736 663 aa14.02□□□□□ -0.16
TRIO-202ENST00000344204 KYAT3Q6YP21 454 aaKnown RBP14.02□□□□□ -0.16
TRIO-202ENST00000344204 UGT1A7Q9HAW7 530 aa14.02□□□□□ -0.16
TRIO-202ENST00000344204 UGT1A10Q9HAW8 530 aa14.02□□□□□ -0.16
TRIO-202ENST00000344204 UGT1A8Q9HAW9 530 aa14.02□□□□□ -0.16
TRIO-202ENST00000344204 PADI6Q6TGC4 694 aa14.02□□□□□ -0.16
TRIO-202ENST00000344204 ERI1Q8IV48 349 aaKnown RBP14.02□□□□□ -0.16
TRIO-202ENST00000344204 TOR1AIP2Q8NFQ8 470 aa14.02□□□□□ -0.16
TRIO-202ENST00000344204 SYTL5Q8TDW5 730 aaPredicted RBP14.02□□□□□ -0.16
TRIO-202ENST00000344204 GNPTGQ9UJJ9 305 aa14.02□□□□□ -0.16
TRIO-202ENST00000344204 C11orf88Q6PI97 169 aa14.02□□□□□ -0.16
TRIO-202ENST00000344204 RAB43Q86YS6 212 aa14.02□□□□□ -0.16
TRIO-202ENST00000344204 SLC7A3Q8WY07 619 aa14.02□□□□□ -0.16
TRIO-202ENST00000344204 VTI1BQ9UEU0 232 aa14.02□□□□□ -0.16
TRIO-202ENST00000344204 GTF3C4Q9UKN8 822 aa14.02□□□□□ -0.16
TRIO-202ENST00000344204 A0A0U1RQJ8 604 aa14.02□□□□□ -0.17
TRIO-202ENST00000344204 ADRA1DP25100 572 aa14.02□□□□□ -0.17
TRIO-202ENST00000344204 USP10Q14694 798 aaKnown RBP14.02□□□□□ -0.17
TRIO-202ENST00000344204 MFSD5Q6N075 450 aa14.02□□□□□ -0.17
TRIO-202ENST00000344204 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.02□□□□□ -0.17
TRIO-202ENST00000344204 STX12Q86Y82 276 aa14.02□□□□□ -0.17
TRIO-202ENST00000344204 BTBD9Q96Q07 612 aa14.02□□□□□ -0.17
TRIO-202ENST00000344204 ACAT2Q9BWD1 397 aa14.02□□□□□ -0.17
TRIO-202ENST00000344204 RSAD1Q9HA92 442 aa14.02□□□□□ -0.17
TRIO-202ENST00000344204 WDR41Q9HAD4 459 aa14.02□□□□□ -0.17
TRIO-202ENST00000344204 BAIAP2Q9UQB8 552 aa14.02□□□□□ -0.17
TRIO-202ENST00000344204 FKBP9O95302 570 aa14.02□□□□□ -0.17
TRIO-202ENST00000344204 DGCR6Q14129 220 aa14.02□□□□□ -0.17
TRIO-202ENST00000344204 TFDP1Q14186 410 aa14.02□□□□□ -0.17
TRIO-202ENST00000344204 C6orf52Q5T4I8 152 aa14.02□□□□□ -0.17
TRIO-202ENST00000344204 KCTD1Q719H9 257 aa14.02□□□□□ -0.17
TRIO-202ENST00000344204 FKBP9P1Q75LS8 142 aa14.02□□□□□ -0.17
TRIO-202ENST00000344204 BBS7Q8IWZ6 715 aa14.02□□□□□ -0.17
TRIO-202ENST00000344204 M0QX08 132 aa14.02□□□□□ -0.17
TRIO-202ENST00000344204 EPN2O95208 641 aa14.02□□□□□ -0.17
TRIO-202ENST00000344204 SERPINA6P08185 405 aa14.02□□□□□ -0.17
TRIO-202ENST00000344204 RALBP11234 206 aa14.02□□□□□ -0.17
TRIO-202ENST00000344204 NUP62P37198 522 aaPredicted RBP14.02□□□□□ -0.17
TRIO-202ENST00000344204 AARS2Q5JTZ9 985 aaKnown RBP14.02□□□□□ -0.17
TRIO-202ENST00000344204 PSMD13Q9UNM6 376 aa14.02□□□□□ -0.17
TRIO-202ENST00000344204 SLC26A3P40879 764 aa14.02□□□□□ -0.17
TRIO-202ENST00000344204 TFDP3Q5H9I0 405 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms