RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 CLEC17AQ6ZS10 378 aa15.47■□□□□ 0.07
UBE3B-202ENST00000342494 LONP2Q86WA8 852 aa15.47■□□□□ 0.07
UBE3B-202ENST00000342494 ATG4AQ8WYN0 398 aa15.47■□□□□ 0.07
UBE3B-202ENST00000342494 ERP27Q96DN0 273 aa15.47■□□□□ 0.07
UBE3B-202ENST00000342494 SMARCD1Q96GM5 515 aa15.47■□□□□ 0.07
UBE3B-202ENST00000342494 NAT9Q9BTE0 207 aa15.47■□□□□ 0.07
UBE3B-202ENST00000342494 ATP13A1Q9HD20 1204 aa15.47■□□□□ 0.07
UBE3B-202ENST00000342494 APPL1Q9UKG1 709 aa15.47■□□□□ 0.07
UBE3B-202ENST00000342494 NCKAP1Q9Y2A7 1128 aa15.47■□□□□ 0.07
UBE3B-202ENST00000342494 PSMD12O00232 456 aaPredicted RBP15.47■□□□□ 0.07
UBE3B-202ENST00000342494 PCNAP12004 261 aa15.47■□□□□ 0.07
UBE3B-202ENST00000342494 MSH3P20585 1137 aa15.47■□□□□ 0.07
UBE3B-202ENST00000342494 ZNF410Q86VK4 478 aa15.47■□□□□ 0.07
UBE3B-202ENST00000342494 TRAPPC12Q8WVT3 735 aa15.47■□□□□ 0.07
UBE3B-202ENST00000342494 OLFM3Q96PB7 478 aa15.47■□□□□ 0.07
UBE3B-202ENST00000342494 RMND5AQ9H871 391 aa15.47■□□□□ 0.07
UBE3B-202ENST00000342494 EXOSC4Q9NPD3 245 aaKnown RBP15.47■□□□□ 0.07
UBE3B-202ENST00000342494 MGAT4DA6NG13 374 aa15.47■□□□□ 0.07
UBE3B-202ENST00000342494 RASSF9O75901 435 aa15.47■□□□□ 0.07
UBE3B-202ENST00000342494 WDR47O94967 919 aa15.47■□□□□ 0.07
UBE3B-202ENST00000342494 SERPINF2P08697 491 aa15.47■□□□□ 0.07
UBE3B-202ENST00000342494 RRM1P23921 792 aa15.47■□□□□ 0.07
UBE3B-202ENST00000342494 ADCYAP1R1P41586 468 aa15.47■□□□□ 0.07
UBE3B-202ENST00000342494 PLIN5Q00G26 463 aa15.47■□□□□ 0.07
UBE3B-202ENST00000342494 IQSEC1Q6DN90 963 aa15.47■□□□□ 0.07
UBE3B-202ENST00000342494 TRMT11Q7Z4G4 463 aaKnown RBP15.47■□□□□ 0.07
UBE3B-202ENST00000342494 DSG4Q86SJ6 1040 aa15.47■□□□□ 0.07
UBE3B-202ENST00000342494 PRPF39Q86UA1 669 aaKnown RBP15.47■□□□□ 0.07
UBE3B-202ENST00000342494 PARP9Q8IXQ6 854 aa15.47■□□□□ 0.07
UBE3B-202ENST00000342494 TBC1D13Q9NVG8 400 aa15.47■□□□□ 0.07
UBE3B-202ENST00000342494 RBM22Q9NW64 420 aaKnown RBP eCLIP15.47■□□□□ 0.07
UBE3B-202ENST00000342494 A0A087X0T9 212 aa15.46■□□□□ 0.07
UBE3B-202ENST00000342494 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.46■□□□□ 0.07
UBE3B-202ENST00000342494 GNG14A0A1W2PPG7 69 aa15.46■□□□□ 0.07
UBE3B-202ENST00000342494 PHF20L1A8MW92 1017 aa15.46■□□□□ 0.07
UBE3B-202ENST00000342494 FAM228BP0C875 321 aa15.46■□□□□ 0.07
UBE3B-202ENST00000342494 TAL1P17542 331 aaPredicted RBP15.46■□□□□ 0.07
UBE3B-202ENST00000342494 TUFMP49411 452 aaKnown RBP15.46■□□□□ 0.07
UBE3B-202ENST00000342494 SV2AQ7L0J3 742 aa15.46■□□□□ 0.07
UBE3B-202ENST00000342494 FBXO36Q8NEA4 188 aa15.46■□□□□ 0.07
UBE3B-202ENST00000342494 EPN3Q9H201 632 aa15.46■□□□□ 0.07
UBE3B-202ENST00000342494 RASSF10A6NK89 507 aa15.46■□□□□ 0.07
UBE3B-202ENST00000342494 B2RBV5 119 aa15.46■□□□□ 0.07
UBE3B-202ENST00000342494 ZW10O43264 779 aa15.46■□□□□ 0.07
UBE3B-202ENST00000342494 ARHGEF9O43307 516 aa15.46■□□□□ 0.07
UBE3B-202ENST00000342494 KRT20P35900 424 aa15.46■□□□□ 0.07
UBE3B-202ENST00000342494 HALP42357 657 aa15.46■□□□□ 0.07
UBE3B-202ENST00000342494 INHBEP58166 350 aa15.46■□□□□ 0.07
UBE3B-202ENST00000342494 SLC29A2Q14542 456 aa15.46■□□□□ 0.07
UBE3B-202ENST00000342494 MTSS1LQ765P7 747 aa15.46■□□□□ 0.07
UBE3B-202ENST00000342494 TFAP2DQ7Z6R9 452 aa15.46■□□□□ 0.07
UBE3B-202ENST00000342494 RPS6KB2Q9UBS0 482 aa15.46■□□□□ 0.07
UBE3B-202ENST00000342494 MSRAQ9UJ68 235 aa15.46■□□□□ 0.07
UBE3B-202ENST00000342494 NCAM2O15394 837 aa15.46■□□□□ 0.07
UBE3B-202ENST00000342494 CYTH3O43739 400 aa15.46■□□□□ 0.07
UBE3B-202ENST00000342494 NDST1P52848 882 aa15.46■□□□□ 0.07
UBE3B-202ENST00000342494 OTOAQ7RTW8 1153 aa15.46■□□□□ 0.07
UBE3B-202ENST00000342494 FAR2Q96K12 515 aa15.46■□□□□ 0.07
UBE3B-202ENST00000342494 CAMKK2Q96RR4 588 aa15.46■□□□□ 0.07
UBE3B-202ENST00000342494 DCDC2Q9UHG0 476 aa15.46■□□□□ 0.07
UBE3B-202ENST00000342494 TSPAN16Q9UKR8 245 aa15.46■□□□□ 0.07
UBE3B-202ENST00000342494 RBAK-RBAKDNI3L0D1 243 aa15.46■□□□□ 0.07
UBE3B-202ENST00000342494 ADCY3O60266 1144 aa15.46■□□□□ 0.07
UBE3B-202ENST00000342494 RTN3O95197 1032 aaPredicted RBP15.46■□□□□ 0.07
UBE3B-202ENST00000342494 PLEKP08567 350 aaPredicted RBP15.46■□□□□ 0.07
UBE3B-202ENST00000342494 VIL1P09327 827 aaKnown RBP15.46■□□□□ 0.07
UBE3B-202ENST00000342494 GZMAP12544 262 aa15.46■□□□□ 0.07
UBE3B-202ENST00000342494 OR1E1P30953 314 aa15.46■□□□□ 0.07
UBE3B-202ENST00000342494 BEX3Q00994 111 aa15.46■□□□□ 0.07
UBE3B-202ENST00000342494 ACTN3Q08043 901 aaPredicted RBP15.46■□□□□ 0.07
UBE3B-202ENST00000342494 ADGRA1Q86SQ6 560 aa15.46■□□□□ 0.07
UBE3B-202ENST00000342494 PLD3Q8IV08 490 aa15.46■□□□□ 0.07
UBE3B-202ENST00000342494 FAM9CQ8IZT9 166 aa15.46■□□□□ 0.07
UBE3B-202ENST00000342494 DMAP1Q9NPF5 467 aaPredicted RBP15.46■□□□□ 0.07
UBE3B-202ENST00000342494 KRCC1Q9NPI7 259 aaPredicted RBP15.46■□□□□ 0.07
UBE3B-202ENST00000342494 RRN3Q9NYV6 651 aa15.46■□□□□ 0.07
UBE3B-202ENST00000342494 PLAGL2Q9UPG8 496 aa15.46■□□□□ 0.07
UBE3B-202ENST00000342494 ADIGQ0VDE8 80 aa15.46■□□□□ 0.06
UBE3B-202ENST00000342494 ARID3BQ8IVW6 561 aaPredicted RBP15.46■□□□□ 0.06
UBE3B-202ENST00000342494 AGGF1Q8N302 714 aaeCLIP15.46■□□□□ 0.06
UBE3B-202ENST00000342494 ASB7Q9H672 318 aa15.46■□□□□ 0.06
UBE3B-202ENST00000342494 MYPNQ86TC9 1320 aa15.46■□□□□ 0.06
UBE3B-202ENST00000342494 MSCO60682 206 aa15.45■□□□□ 0.06
UBE3B-202ENST00000342494 CABYRO75952 493 aa15.45■□□□□ 0.06
UBE3B-202ENST00000342494 GLRBP48167 497 aa15.45■□□□□ 0.06
UBE3B-202ENST00000342494 CNTN2Q02246 1040 aa15.45■□□□□ 0.06
UBE3B-202ENST00000342494 RUNX1T1Q06455 604 aa15.45■□□□□ 0.06
UBE3B-202ENST00000342494 KBTBD12Q3ZCT8 623 aa15.45■□□□□ 0.06
UBE3B-202ENST00000342494 SERPINB11Q96P15 392 aa15.45■□□□□ 0.06
UBE3B-202ENST00000342494 FAM111AQ96PZ2 611 aa15.45■□□□□ 0.06
UBE3B-202ENST00000342494 VIPAS39Q9H9C1 493 aa15.45■□□□□ 0.06
UBE3B-202ENST00000342494 SALL1Q9NSC2 1324 aa15.45■□□□□ 0.06
UBE3B-202ENST00000342494 ADAMTS13Q76LX8 1427 aa15.45■□□□□ 0.06
UBE3B-202ENST00000342494 STX5Q13190 355 aa15.45■□□□□ 0.06
UBE3B-202ENST00000342494 CELF6Q96J87 481 aaKnown RBP15.45■□□□□ 0.06
UBE3B-202ENST00000342494 ZSCAN32Q9NX65 697 aa15.45■□□□□ 0.06
UBE3B-202ENST00000342494 SCN3BQ9NY72 215 aa15.45■□□□□ 0.06
UBE3B-202ENST00000342494 UBP1Q9NZI7 540 aa15.45■□□□□ 0.06
UBE3B-202ENST00000342494 TNNI3P19429 210 aa15.45■□□□□ 0.06
UBE3B-202ENST00000342494 FUT11Q495W5 492 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms