RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 KAT7O95251 611 aa21.21■□□□□ 0.99
SYNE2-201ENST00000341472 APBB3O95704 486 aa21.21■□□□□ 0.99
SYNE2-201ENST00000341472 CD19P15391 556 aa21.21■□□□□ 0.99
SYNE2-201ENST00000341472 GRIA2P42262 883 aa21.21■□□□□ 0.99
SYNE2-201ENST00000341472 MRPS21P82921 87 aaKnown RBP21.21■□□□□ 0.99
SYNE2-201ENST00000341472 PAK1Q13153 545 aa21.21■□□□□ 0.99
SYNE2-201ENST00000341472 SGO2Q562F6 1265 aa21.21■□□□□ 0.99
SYNE2-201ENST00000341472 ARHGAP18Q8N392 663 aa21.21■□□□□ 0.99
SYNE2-201ENST00000341472 GAB3Q8WWW8 586 aa21.21■□□□□ 0.99
SYNE2-201ENST00000341472 NT5C1BQ96P26 610 aa21.21■□□□□ 0.99
SYNE2-201ENST00000341472 HHIPQ96QV1 700 aa21.21■□□□□ 0.99
SYNE2-201ENST00000341472 CDK5RAP1Q96SZ6 601 aaKnown RBP21.21■□□□□ 0.99
SYNE2-201ENST00000341472 SPHK2Q9NRA0 654 aa21.21■□□□□ 0.99
SYNE2-201ENST00000341472 DENND4CQ5VZ89 1909 aa21.2■□□□□ 0.98
SYNE2-201ENST00000341472 MDM4O15151 490 aa21.2■□□□□ 0.98
SYNE2-201ENST00000341472 P4HA2O15460 535 aa21.2■□□□□ 0.98
SYNE2-201ENST00000341472 HOXC11O43248 304 aaPredicted RBP21.2■□□□□ 0.98
SYNE2-201ENST00000341472 RPP40O75818 363 aaKnown RBP21.2■□□□□ 0.98
SYNE2-201ENST00000341472 FGFR1OPO95684 399 aaKnown RBP21.2■□□□□ 0.98
SYNE2-201ENST00000341472 VDRP11473 427 aa21.2■□□□□ 0.98
SYNE2-201ENST00000341472 TNFRSF4P43489 277 aa21.2■□□□□ 0.98
SYNE2-201ENST00000341472 ANO4Q32M45 955 aa21.2■□□□□ 0.98
SYNE2-201ENST00000341472 PREPLQ4J6C6 727 aaPredicted RBP21.2■□□□□ 0.98
SYNE2-201ENST00000341472 CACNA2D4Q7Z3S7 1137 aa21.2■□□□□ 0.98
SYNE2-201ENST00000341472 NAT16Q8N8M0 369 aa21.2■□□□□ 0.98
SYNE2-201ENST00000341472 TRIML1Q8N9V2 468 aa21.2■□□□□ 0.98
SYNE2-201ENST00000341472 SRRTQ9BXP5 876 aaKnown RBP21.2■□□□□ 0.98
SYNE2-201ENST00000341472 KIAA1468Q9P260 1216 aa21.2■□□□□ 0.98
SYNE2-201ENST00000341472 DEC1Q9P2X7 70 aa21.2■□□□□ 0.98
SYNE2-201ENST00000341472 HESX1Q9UBX0 185 aa21.2■□□□□ 0.98
SYNE2-201ENST00000341472 USP18Q9UMW8 372 aa21.2■□□□□ 0.98
SYNE2-201ENST00000341472 TBC1D3BA6NDS4 549 aa21.19■□□□□ 0.98
SYNE2-201ENST00000341472 GREM1O60565 184 aa21.19■□□□□ 0.98
SYNE2-201ENST00000341472 TGM1P22735 817 aa21.19■□□□□ 0.98
SYNE2-201ENST00000341472 CAMK4Q16566 473 aa21.19■□□□□ 0.98
SYNE2-201ENST00000341472 GOLGA7BQ2TAP0 167 aa21.19■□□□□ 0.98
SYNE2-201ENST00000341472 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.19■□□□□ 0.98
SYNE2-201ENST00000341472 C12orf40Q86WS4 652 aa21.19■□□□□ 0.98
SYNE2-201ENST00000341472 TTC30AQ86WT1 665 aa21.19■□□□□ 0.98
SYNE2-201ENST00000341472 CCDC33Q8N5R6 958 aa21.19■□□□□ 0.98
SYNE2-201ENST00000341472 EHBP1Q8NDI1 1231 aa21.19■□□□□ 0.98
SYNE2-201ENST00000341472 RMDN1Q96DB5 314 aa21.19■□□□□ 0.98
SYNE2-201ENST00000341472 WDR35Q9P2L0 1181 aa21.19■□□□□ 0.98
SYNE2-201ENST00000341472 EBF1Q9UH73 591 aa21.19■□□□□ 0.98
SYNE2-201ENST00000341472 TSPAN16Q9UKR8 245 aa21.19■□□□□ 0.98
SYNE2-201ENST00000341472 PCDHB4Q9Y5E5 795 aa21.19■□□□□ 0.98
SYNE2-201ENST00000341472 PATJQ8NI35 1801 aa21.19■□□□□ 0.98
SYNE2-201ENST00000341472 PTPRDP23468 1912 aa21.19■□□□□ 0.98
SYNE2-201ENST00000341472 GREB1Q4ZG55 1949 aa21.18■□□□□ 0.98
SYNE2-201ENST00000341472 ZNF638Q14966 1978 aaKnown RBP21.18■□□□□ 0.98
SYNE2-201ENST00000341472 CCDC192P0DO97 292 aa21.18■□□□□ 0.98
SYNE2-201ENST00000341472 TKTL1P51854 596 aa21.18■□□□□ 0.98
SYNE2-201ENST00000341472 COG7P83436 770 aa21.18■□□□□ 0.98
SYNE2-201ENST00000341472 PDE4CQ08493 712 aa21.18■□□□□ 0.98
SYNE2-201ENST00000341472 SPEM2Q0P670 501 aa21.18■□□□□ 0.98
SYNE2-201ENST00000341472 MESP2Q0VG99 397 aa21.18■□□□□ 0.98
SYNE2-201ENST00000341472 RAB41Q5JT25 222 aa21.18■□□□□ 0.98
SYNE2-201ENST00000341472 TMEM270Q6UE05 265 aa21.18■□□□□ 0.98
SYNE2-201ENST00000341472 NUDT18Q6ZVK8 323 aa21.18■□□□□ 0.98
SYNE2-201ENST00000341472 MIB1Q86YT6 1006 aa21.18■□□□□ 0.98
SYNE2-201ENST00000341472 TRIM59Q8IWR1 403 aa21.18■□□□□ 0.98
SYNE2-201ENST00000341472 ETFBKMTQ8IXQ9 262 aa21.18■□□□□ 0.98
SYNE2-201ENST00000341472 PPM1KQ8N3J5 372 aa21.18■□□□□ 0.98
SYNE2-201ENST00000341472 FAM160A2Q8N612 972 aaPredicted RBP21.18■□□□□ 0.98
SYNE2-201ENST00000341472 UBR7Q8N806 425 aa21.18■□□□□ 0.98
SYNE2-201ENST00000341472 TSTD1Q8NFU3 115 aa21.18■□□□□ 0.98
SYNE2-201ENST00000341472 UBA3Q8TBC4 463 aa21.18■□□□□ 0.98
SYNE2-201ENST00000341472 LRRC4Q9HBW1 653 aa21.18■□□□□ 0.98
SYNE2-201ENST00000341472 ANTXRLA6NF34 631 aa21.17■□□□□ 0.98
SYNE2-201ENST00000341472 XPO1O14980 1071 aaKnown RBP21.17■□□□□ 0.98
SYNE2-201ENST00000341472 TULP3O75386 442 aa21.17■□□□□ 0.98
SYNE2-201ENST00000341472 ZBED1O96006 694 aa21.17■□□□□ 0.98
SYNE2-201ENST00000341472 PAEPP09466 180 aa21.17■□□□□ 0.98
SYNE2-201ENST00000341472 TIE1P35590 1138 aa21.17■□□□□ 0.98
SYNE2-201ENST00000341472 BCAT1P54687 386 aa21.17■□□□□ 0.98
SYNE2-201ENST00000341472 YWHAGP61981 247 aaKnown RBP eCLIP21.17■□□□□ 0.98
SYNE2-201ENST00000341472 KDSRQ06136 332 aa21.17■□□□□ 0.98
SYNE2-201ENST00000341472 KCNH2Q12809 1159 aa21.17■□□□□ 0.98
SYNE2-201ENST00000341472 HSF5Q4G112 596 aaPredicted RBP21.17■□□□□ 0.98
SYNE2-201ENST00000341472 EMC10Q5UCC4 262 aa21.17■□□□□ 0.98
SYNE2-201ENST00000341472 PM20D1Q6GTS8 502 aa21.17■□□□□ 0.98
SYNE2-201ENST00000341472 SFTPA1Q8IWL2 248 aa21.17■□□□□ 0.98
SYNE2-201ENST00000341472 LMO3Q8TAP4 145 aa21.17■□□□□ 0.98
SYNE2-201ENST00000341472 PARD6AQ9NPB6 346 aa21.17■□□□□ 0.98
SYNE2-201ENST00000341472 MMP17Q9ULZ9 603 aa21.17■□□□□ 0.98
SYNE2-201ENST00000341472 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.17■□□□□ 0.98
SYNE2-201ENST00000341472 ANAPC1Q9H1A4 1944 aa21.17■□□□□ 0.98
SYNE2-201ENST00000341472 FANCMQ8IYD8 2048 aa21.17■□□□□ 0.98
SYNE2-201ENST00000341472 FRYLO94915 3013 aa21.16■□□□□ 0.98
SYNE2-201ENST00000341472 OBSL1O75147 1896 aa21.16■□□□□ 0.98
SYNE2-201ENST00000341472 PRR5-ARHGAP8B1AHC4 643 aa21.16■□□□□ 0.98
SYNE2-201ENST00000341472 TULP2O00295 520 aa21.16■□□□□ 0.98
SYNE2-201ENST00000341472 O00370 1275 aa21.16■□□□□ 0.98
SYNE2-201ENST00000341472 LRP3O75074 770 aa21.16■□□□□ 0.98
SYNE2-201ENST00000341472 KLF8O95600 359 aaPredicted RBP21.16■□□□□ 0.98
SYNE2-201ENST00000341472 AFPP02771 609 aaKnown RBP21.16■□□□□ 0.98
SYNE2-201ENST00000341472 DGKEP52429 567 aa21.16■□□□□ 0.98
SYNE2-201ENST00000341472 MARSP56192 900 aaKnown RBP21.16■□□□□ 0.98
SYNE2-201ENST00000341472 ARHGAP8P85298 464 aa21.16■□□□□ 0.98
SYNE2-201ENST00000341472 LMNB2Q03252 620 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms