RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 C12orf40Q86WS4 652 aa13.8□□□□□ -0.2
NECTIN1-203ENST00000341398 SYT12Q8IV01 421 aa13.8□□□□□ -0.2
NECTIN1-203ENST00000341398 BBS7Q8IWZ6 715 aa13.8□□□□□ -0.2
NECTIN1-203ENST00000341398 KIAA0895Q8NCT3 520 aa13.8□□□□□ -0.2
NECTIN1-203ENST00000341398 RLN3Q8WXF3 142 aa13.8□□□□□ -0.2
NECTIN1-203ENST00000341398 ZFRQ96KR1 1074 aaKnown RBP13.8□□□□□ -0.2
NECTIN1-203ENST00000341398 SMOQ99835 787 aa13.8□□□□□ -0.2
NECTIN1-203ENST00000341398 SDCBP2Q9H190 292 aa13.8□□□□□ -0.2
NECTIN1-203ENST00000341398 KCTD10Q9H3F6 313 aa13.8□□□□□ -0.2
NECTIN1-203ENST00000341398 CYP3A43Q9HB55 503 aa13.8□□□□□ -0.2
NECTIN1-203ENST00000341398 EVLQ9UI08 416 aaPredicted RBP13.8□□□□□ -0.2
NECTIN1-203ENST00000341398 TCRBV21S2A2A0A5A6 115 aa13.79□□□□□ -0.2
NECTIN1-203ENST00000341398 AP5Z1O43299 807 aa13.79□□□□□ -0.2
NECTIN1-203ENST00000341398 ACTN4O43707 911 aaKnown RBP13.79□□□□□ -0.2
NECTIN1-203ENST00000341398 ASS1P00966 412 aaKnown RBP13.79□□□□□ -0.2
NECTIN1-203ENST00000341398 HLA-DRAP01903 254 aa13.79□□□□□ -0.2
NECTIN1-203ENST00000341398 CEACAM1P13688 526 aa13.79□□□□□ -0.2
NECTIN1-203ENST00000341398 RPL13P26373 211 aaKnown RBP13.79□□□□□ -0.2
NECTIN1-203ENST00000341398 ADORA2BP29275 332 aa13.79□□□□□ -0.2
NECTIN1-203ENST00000341398 NTSR1P30989 418 aa13.79□□□□□ -0.2
NECTIN1-203ENST00000341398 PLA2G4AP47712 749 aa13.79□□□□□ -0.2
NECTIN1-203ENST00000341398 PSEN1P49768 467 aa13.79□□□□□ -0.2
NECTIN1-203ENST00000341398 VAMP7P51809 220 aa13.79□□□□□ -0.2
NECTIN1-203ENST00000341398 DLG4P78352 724 aa13.79□□□□□ -0.2
NECTIN1-203ENST00000341398 IRX4P78413 519 aa13.79□□□□□ -0.2
NECTIN1-203ENST00000341398 C10orf76Q5T2E6 689 aa13.79□□□□□ -0.2
NECTIN1-203ENST00000341398 GRAMD4Q6IC98 578 aa13.79□□□□□ -0.2
NECTIN1-203ENST00000341398 INTS8Q75QN2 995 aaKnown RBP13.79□□□□□ -0.2
NECTIN1-203ENST00000341398 TMEM25Q86YD3 366 aa13.79□□□□□ -0.2
NECTIN1-203ENST00000341398 ETFBKMTQ8IXQ9 262 aa13.79□□□□□ -0.2
NECTIN1-203ENST00000341398 TERB1Q8NA31 727 aa13.79□□□□□ -0.2
NECTIN1-203ENST00000341398 CYFIP2Q96F07 1278 aa13.79□□□□□ -0.2
NECTIN1-203ENST00000341398 HNRNPABQ99729 332 aaKnown RBP13.79□□□□□ -0.2
NECTIN1-203ENST00000341398 NT5C1AQ9BXI3 368 aa13.79□□□□□ -0.2
NECTIN1-203ENST00000341398 FAM49BQ9NUQ9 324 aa13.79□□□□□ -0.2
NECTIN1-203ENST00000341398 SCML2Q9UQR0 700 aa13.79□□□□□ -0.2
NECTIN1-203ENST00000341398 TRAF3IP3Q9Y228 551 aa13.79□□□□□ -0.2
NECTIN1-203ENST00000341398 STARD13Q9Y3M8 1113 aa13.79□□□□□ -0.2
NECTIN1-203ENST00000341398 PCDHA5Q9Y5H7 936 aa13.79□□□□□ -0.2
NECTIN1-203ENST00000341398 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.78□□□□□ -0.2
NECTIN1-203ENST00000341398 A0A1B0GVL5 298 aa13.78□□□□□ -0.2
NECTIN1-203ENST00000341398 ZNF217O75362 1048 aa13.78□□□□□ -0.2
NECTIN1-203ENST00000341398 HOXB2P14652 356 aa13.78□□□□□ -0.2
NECTIN1-203ENST00000341398 CSRP1P21291 193 aaKnown RBP13.78□□□□□ -0.2
NECTIN1-203ENST00000341398 ACO1P21399 889 aaKnown RBP13.78□□□□□ -0.2
NECTIN1-203ENST00000341398 UAP1L1Q3KQV9 507 aa13.78□□□□□ -0.2
NECTIN1-203ENST00000341398 TRIM61Q5EBN2 209 aa13.78□□□□□ -0.2
NECTIN1-203ENST00000341398 LYSMD4Q5XG99 296 aa13.78□□□□□ -0.2
NECTIN1-203ENST00000341398 RABEPKQ7Z6M1 372 aa13.78□□□□□ -0.2
NECTIN1-203ENST00000341398 SFTPA1Q8IWL2 248 aa13.78□□□□□ -0.2
NECTIN1-203ENST00000341398 TMEFF1Q8IYR6 380 aa13.78□□□□□ -0.2
NECTIN1-203ENST00000341398 PHTF2Q8N3S3 785 aa13.78□□□□□ -0.2
NECTIN1-203ENST00000341398 C12orf29Q8N999 325 aa13.78□□□□□ -0.2
NECTIN1-203ENST00000341398 ZMIZ2Q8NF64 920 aa13.78□□□□□ -0.2
NECTIN1-203ENST00000341398 CEP76Q8TAP6 659 aa13.78□□□□□ -0.2
NECTIN1-203ENST00000341398 CCDC34Q96HJ3 373 aa13.78□□□□□ -0.2
NECTIN1-203ENST00000341398 SPATA32Q96LK8 384 aa13.78□□□□□ -0.2
NECTIN1-203ENST00000341398 CDK5RAP1Q96SZ6 601 aaKnown RBP13.78□□□□□ -0.2
NECTIN1-203ENST00000341398 BBS2Q9BXC9 721 aa13.78□□□□□ -0.2
NECTIN1-203ENST00000341398 KLF16Q9BXK1 252 aaPredicted RBP13.78□□□□□ -0.2
NECTIN1-203ENST00000341398 SLC32A1Q9H598 525 aa13.78□□□□□ -0.2
NECTIN1-203ENST00000341398 PNPLA8Q9NP80 782 aa13.78□□□□□ -0.2
NECTIN1-203ENST00000341398 CYLDQ9NQC7 956 aa13.78□□□□□ -0.2
NECTIN1-203ENST00000341398 DNAJC17Q9NVM6 304 aaKnown RBP13.78□□□□□ -0.2
NECTIN1-203ENST00000341398 DNMT3LQ9UJW3 386 aa13.78□□□□□ -0.2
NECTIN1-203ENST00000341398 ZNF510Q9Y2H8 683 aa13.78□□□□□ -0.2
NECTIN1-203ENST00000341398 ANTXRLA6NF34 631 aa13.77□□□□□ -0.21
NECTIN1-203ENST00000341398 NEDD8-MDP1E9PL57 170 aa13.77□□□□□ -0.21
NECTIN1-203ENST00000341398 ADAM23O75077 832 aa13.77□□□□□ -0.21
NECTIN1-203ENST00000341398 BEST1O76090 585 aa13.77□□□□□ -0.21
NECTIN1-203ENST00000341398 RALAP11233 206 aa13.77□□□□□ -0.21
NECTIN1-203ENST00000341398 TYRP14679 529 aa13.77□□□□□ -0.21
NECTIN1-203ENST00000341398 HNRNPLP14866 589 aaKnown RBP eCLIP13.77□□□□□ -0.21
NECTIN1-203ENST00000341398 PFKFB1P16118 471 aa13.77□□□□□ -0.21
NECTIN1-203ENST00000341398 NR2F2P24468 414 aa13.77□□□□□ -0.21
NECTIN1-203ENST00000341398 HOXD12P35452 270 aa13.77□□□□□ -0.21
NECTIN1-203ENST00000341398 PSMC2P35998 433 aaKnown RBP13.77□□□□□ -0.21
NECTIN1-203ENST00000341398 SYKP43405 635 aa13.77□□□□□ -0.21
NECTIN1-203ENST00000341398 ATXN3P54252 364 aaPredicted RBP13.77□□□□□ -0.21
NECTIN1-203ENST00000341398 KRT85P78386 507 aa13.77□□□□□ -0.21
NECTIN1-203ENST00000341398 ENPEPQ07075 957 aa13.77□□□□□ -0.21
NECTIN1-203ENST00000341398 MESP2Q0VG99 397 aa13.77□□□□□ -0.21
NECTIN1-203ENST00000341398 ORC1Q13415 861 aa13.77□□□□□ -0.21
NECTIN1-203ENST00000341398 E2F5Q15329 346 aa13.77□□□□□ -0.21
NECTIN1-203ENST00000341398 NFIL3Q16649 462 aa13.77□□□□□ -0.21
NECTIN1-203ENST00000341398 MAP7D1Q3KQU3 841 aa13.77□□□□□ -0.21
NECTIN1-203ENST00000341398 SH3PXD2AQ5TCZ1 1133 aa13.77□□□□□ -0.21
NECTIN1-203ENST00000341398 SPOPLQ6IQ16 392 aa13.77□□□□□ -0.21
NECTIN1-203ENST00000341398 KLHDC10Q6PID8 442 aa13.77□□□□□ -0.21
NECTIN1-203ENST00000341398 CHPFQ8IZ52 775 aa13.77□□□□□ -0.21
NECTIN1-203ENST00000341398 TTC39CQ8N584 583 aa13.77□□□□□ -0.21
NECTIN1-203ENST00000341398 SPRYD3Q8NCJ5 442 aa13.77□□□□□ -0.21
NECTIN1-203ENST00000341398 ELMO3Q96BJ8 720 aa13.77□□□□□ -0.21
NECTIN1-203ENST00000341398 ASCC3Q8N3C0 2202 aaKnown RBP13.76□□□□□ -0.21
NECTIN1-203ENST00000341398 PATE3B3GLJ2 98 aa13.76□□□□□ -0.21
NECTIN1-203ENST00000341398 CDX4O14627 284 aaPredicted RBP13.76□□□□□ -0.21
NECTIN1-203ENST00000341398 TBX18O95935 607 aa13.76□□□□□ -0.21
NECTIN1-203ENST00000341398 RARGP13631 454 aa13.76□□□□□ -0.21
NECTIN1-203ENST00000341398 ASPAP45381 313 aa13.76□□□□□ -0.21
NECTIN1-203ENST00000341398 RPL6Q02878 288 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms