RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 APBB2Q92870 758 aa15.31■□□□□ 0.04
RRP1B-201ENST00000340648 TSPAN17Q96FV3 270 aa15.31■□□□□ 0.04
RRP1B-201ENST00000340648 VPS50Q96JG6 964 aa15.31■□□□□ 0.04
RRP1B-201ENST00000340648 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.31■□□□□ 0.04
RRP1B-201ENST00000340648 GRHL1Q9NZI5 618 aa15.31■□□□□ 0.04
RRP1B-201ENST00000340648 POLIQ9UNA4 740 aa15.31■□□□□ 0.04
RRP1B-201ENST00000340648 NFIL3Q16649 462 aa15.3■□□□□ 0.04
RRP1B-201ENST00000340648 WLSQ5T9L3 541 aa15.3■□□□□ 0.04
RRP1B-201ENST00000340648 CES3Q6UWW8 571 aa15.3■□□□□ 0.04
RRP1B-201ENST00000340648 OR6Y1Q8NGX8 325 aa15.3■□□□□ 0.04
RRP1B-201ENST00000340648 TMEM176AQ96HP8 235 aa15.3■□□□□ 0.04
RRP1B-201ENST00000340648 KREMEN1Q96MU8 473 aa15.3■□□□□ 0.04
RRP1B-201ENST00000340648 LRRC40Q9H9A6 602 aa15.3■□□□□ 0.04
RRP1B-201ENST00000340648 NAPEPLDQ6IQ20 393 aa15.3■□□□□ 0.04
RRP1B-201ENST00000340648 MPZL3Q6UWV2 235 aa15.3■□□□□ 0.04
RRP1B-201ENST00000340648 NPNTQ6UXI9 565 aa15.3■□□□□ 0.04
RRP1B-201ENST00000340648 NET1Q7Z628 596 aaPredicted RBP15.3■□□□□ 0.04
RRP1B-201ENST00000340648 COLGALT1Q8NBJ5 622 aa15.3■□□□□ 0.04
RRP1B-201ENST00000340648 ZNF555Q8NEP9 628 aa15.3■□□□□ 0.04
RRP1B-201ENST00000340648 TMEM79Q9BSE2 394 aa15.3■□□□□ 0.04
RRP1B-201ENST00000340648 PACSIN3Q9UKS6 424 aa15.3■□□□□ 0.04
RRP1B-201ENST00000340648 GAKO14976 1311 aa15.3■□□□□ 0.04
RRP1B-201ENST00000340648 TIMM44O43615 452 aa15.3■□□□□ 0.04
RRP1B-201ENST00000340648 KDELR1P24390 212 aa15.3■□□□□ 0.04
RRP1B-201ENST00000340648 RBL1P28749 1068 aa15.3■□□□□ 0.04
RRP1B-201ENST00000340648 PTGIRP43119 386 aa15.3■□□□□ 0.04
RRP1B-201ENST00000340648 CDH8P55286 799 aa15.3■□□□□ 0.04
RRP1B-201ENST00000340648 GTF2BQ00403 316 aa15.3■□□□□ 0.04
RRP1B-201ENST00000340648 MGAT5Q09328 741 aa15.3■□□□□ 0.04
RRP1B-201ENST00000340648 SLC1A5Q15758 541 aa15.3■□□□□ 0.04
RRP1B-201ENST00000340648 DENND1BQ6P3S1 775 aa15.3■□□□□ 0.04
RRP1B-201ENST00000340648 SHISA4Q96DD7 197 aa15.3■□□□□ 0.04
RRP1B-201ENST00000340648 OTUD5Q96G74 571 aa15.3■□□□□ 0.04
RRP1B-201ENST00000340648 NAT9Q9BTE0 207 aa15.3■□□□□ 0.04
RRP1B-201ENST00000340648 GRIP2Q9C0E4 1043 aa15.3■□□□□ 0.04
RRP1B-201ENST00000340648 LRRC4CQ9HCJ2 640 aa15.3■□□□□ 0.04
RRP1B-201ENST00000340648 DPP3Q9NY33 737 aa15.3■□□□□ 0.04
RRP1B-201ENST00000340648 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.3■□□□□ 0.04
RRP1B-201ENST00000340648 M0QYT0 321 aa15.3■□□□□ 0.04
RRP1B-201ENST00000340648 PGM3O95394 542 aa15.3■□□□□ 0.04
RRP1B-201ENST00000340648 ACADSBP45954 432 aa15.3■□□□□ 0.04
RRP1B-201ENST00000340648 ABCE1P61221 599 aaKnown RBP15.3■□□□□ 0.04
RRP1B-201ENST00000340648 UBAP2LQ14157 1087 aaKnown RBP15.3■□□□□ 0.04
RRP1B-201ENST00000340648 BTBD8Q5XKL5 378 aa15.3■□□□□ 0.04
RRP1B-201ENST00000340648 LPCAT2Q7L5N7 544 aa15.3■□□□□ 0.04
RRP1B-201ENST00000340648 SLFN11Q7Z7L1 901 aa15.3■□□□□ 0.04
RRP1B-201ENST00000340648 EGFL8Q99944 293 aa15.3■□□□□ 0.04
RRP1B-201ENST00000340648 DRG1Q9Y295 367 aaKnown RBP15.3■□□□□ 0.04
RRP1B-201ENST00000340648 A0A0B4J269 797 aa15.29■□□□□ 0.04
RRP1B-201ENST00000340648 C16orf96A6NNT2 1141 aa15.29■□□□□ 0.04
RRP1B-201ENST00000340648 ZNF189O75820 626 aaPredicted RBP15.29■□□□□ 0.04
RRP1B-201ENST00000340648 SMNDC1O75940 238 aaKnown RBP eCLIP15.29■□□□□ 0.04
RRP1B-201ENST00000340648 NPTXRO95502 500 aa15.29■□□□□ 0.04
RRP1B-201ENST00000340648 MT-CO1P00395 513 aa15.29■□□□□ 0.04
RRP1B-201ENST00000340648 ETS2P15036 469 aa15.29■□□□□ 0.04
RRP1B-201ENST00000340648 CLCN3P51790 818 aa15.29■□□□□ 0.04
RRP1B-201ENST00000340648 SPOUT1Q5T280 376 aaKnown RBP15.29■□□□□ 0.04
RRP1B-201ENST00000340648 ACBD5Q5T8D3 534 aaPredicted RBP15.29■□□□□ 0.04
RRP1B-201ENST00000340648 POLNQ7Z5Q5 900 aa15.29■□□□□ 0.04
RRP1B-201ENST00000340648 CLNKQ7Z7G1 428 aa15.29■□□□□ 0.04
RRP1B-201ENST00000340648 ADCK1Q86TW2 530 aa15.29■□□□□ 0.04
RRP1B-201ENST00000340648 SNX32Q86XE0 403 aa15.29■□□□□ 0.04
RRP1B-201ENST00000340648 EFCAB3Q8N7B9 438 aa15.29■□□□□ 0.04
RRP1B-201ENST00000340648 DDHD1Q8NEL9 900 aa15.29■□□□□ 0.04
RRP1B-201ENST00000340648 PRPF18Q99633 342 aaKnown RBP15.29■□□□□ 0.04
RRP1B-201ENST00000340648 NRDE2Q9H7Z3 1164 aa15.29■□□□□ 0.04
RRP1B-201ENST00000340648 CHST12Q9NRB3 414 aa15.29■□□□□ 0.04
RRP1B-201ENST00000340648 SCHIP1Q9P0W5 487 aaPredicted RBP15.29■□□□□ 0.04
RRP1B-201ENST00000340648 AJAP1Q9UKB5 411 aaPredicted RBP15.29■□□□□ 0.04
RRP1B-201ENST00000340648 PSMD3O43242 534 aa15.29■□□□□ 0.04
RRP1B-201ENST00000340648 ZMPSTE24O75844 475 aa15.29■□□□□ 0.04
RRP1B-201ENST00000340648 CXCL8P10145 99 aa15.29■□□□□ 0.04
RRP1B-201ENST00000340648 CCDC15Q0P6D6 951 aa15.29■□□□□ 0.04
RRP1B-201ENST00000340648 RNF220Q5VTB9 566 aa15.29■□□□□ 0.04
RRP1B-201ENST00000340648 ZBTB49Q6ZSB9 765 aa15.29■□□□□ 0.04
RRP1B-201ENST00000340648 CDRT15Q96T59 188 aa15.29■□□□□ 0.04
RRP1B-201ENST00000340648 COPS7BQ9H9Q2 264 aaPredicted RBP15.29■□□□□ 0.04
RRP1B-201ENST00000340648 GID8Q9NWU2 228 aa15.29■□□□□ 0.04
RRP1B-201ENST00000340648 ZNRF3Q9ULT6 936 aa15.29■□□□□ 0.04
RRP1B-201ENST00000340648 DPPA5A6NC42 116 aa15.29■□□□□ 0.04
RRP1B-201ENST00000340648 C2orf71A6NGG8 1288 aa15.29■□□□□ 0.04
RRP1B-201ENST00000340648 MYL3P08590 195 aa15.29■□□□□ 0.04
RRP1B-201ENST00000340648 MRPS22P82650 360 aaKnown RBP15.29■□□□□ 0.04
RRP1B-201ENST00000340648 GLRA4Q5JXX5 417 aa15.29■□□□□ 0.04
RRP1B-201ENST00000340648 SEMA4DQ92854 862 aa15.29■□□□□ 0.04
RRP1B-201ENST00000340648 MECRQ9BV79 373 aa15.29■□□□□ 0.04
RRP1B-201ENST00000340648 TMEM109Q9BVC6 243 aa15.29■□□□□ 0.04
RRP1B-201ENST00000340648 ACSS3Q9H6R3 686 aa15.29■□□□□ 0.04
RRP1B-201ENST00000340648 MRGBPQ9NV56 204 aa15.29■□□□□ 0.04
RRP1B-201ENST00000340648 VAV3Q9UKW4 847 aa15.29■□□□□ 0.04
RRP1B-201ENST00000340648 AFDNP55196 1824 aaKnown RBP15.29■□□□□ 0.04
RRP1B-201ENST00000340648 ABCC6O95255 1503 aa15.29■□□□□ 0.04
RRP1B-201ENST00000340648 F8W8V4 182 aa15.28■□□□□ 0.04
RRP1B-201ENST00000340648 LIN7AO14910 233 aaPredicted RBP15.28■□□□□ 0.04
RRP1B-201ENST00000340648 BNIP3LO60238 219 aa15.28■□□□□ 0.04
RRP1B-201ENST00000340648 H2AFYO75367 372 aaKnown RBP15.28■□□□□ 0.04
RRP1B-201ENST00000340648 SUPT7LO94864 414 aa15.28■□□□□ 0.04
RRP1B-201ENST00000340648 TNFAIP8O95379 198 aa15.28■□□□□ 0.04
RRP1B-201ENST00000340648 PSMA4P25789 261 aaKnown RBP15.28■□□□□ 0.04
RRP1B-201ENST00000340648 MGAT1P26572 445 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms