RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 OTUB2Q96DC9 234 aa15.36■□□□□ 0.05
ERCC1-203ENST00000340192 C2orf42Q9NWW7 574 aa15.36■□□□□ 0.05
ERCC1-203ENST00000340192 CLIC5Q9NZA1 410 aa15.36■□□□□ 0.05
ERCC1-203ENST00000340192 DNMT3LQ9UJW3 386 aa15.36■□□□□ 0.05
ERCC1-203ENST00000340192 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.36■□□□□ 0.05
ERCC1-203ENST00000340192 CFAP54Q96N23 3096 aa15.35■□□□□ 0.05
ERCC1-203ENST00000340192 GREM1O60565 184 aa15.35■□□□□ 0.05
ERCC1-203ENST00000340192 ADH1CP00326 375 aa15.35■□□□□ 0.05
ERCC1-203ENST00000340192 RALAP11233 206 aa15.35■□□□□ 0.05
ERCC1-203ENST00000340192 KRT5P13647 590 aa15.35■□□□□ 0.05
ERCC1-203ENST00000340192 OPRD1P41143 372 aa15.35■□□□□ 0.05
ERCC1-203ENST00000340192 PLA2G4AP47712 749 aa15.35■□□□□ 0.05
ERCC1-203ENST00000340192 APBA1Q02410 837 aa15.35■□□□□ 0.05
ERCC1-203ENST00000340192 GOLGA8FQ08AF8 430 aa15.35■□□□□ 0.05
ERCC1-203ENST00000340192 GOLGA8DPQ0D2H9 430 aa15.35■□□□□ 0.05
ERCC1-203ENST00000340192 ADIGQ0VDE8 80 aa15.35■□□□□ 0.05
ERCC1-203ENST00000340192 STILQ15468 1287 aa15.35■□□□□ 0.05
ERCC1-203ENST00000340192 CNGA2Q16280 664 aa15.35■□□□□ 0.05
ERCC1-203ENST00000340192 MAN2A1Q16706 1144 aa15.35■□□□□ 0.05
ERCC1-203ENST00000340192 EXOC3L4Q17RC7 722 aa15.35■□□□□ 0.05
ERCC1-203ENST00000340192 CT47A1Q5JQC4 288 aaPredicted RBP15.35■□□□□ 0.05
ERCC1-203ENST00000340192 PM20D1Q6GTS8 502 aa15.35■□□□□ 0.05
ERCC1-203ENST00000340192 PKN3Q6P5Z2 889 aa15.35■□□□□ 0.05
ERCC1-203ENST00000340192 GJB7Q6PEY0 223 aa15.35■□□□□ 0.05
ERCC1-203ENST00000340192 RBM43Q6ZSC3 357 aaKnown RBP15.35■□□□□ 0.05
ERCC1-203ENST00000340192 TADA2BQ86TJ2 420 aa15.35■□□□□ 0.05
ERCC1-203ENST00000340192 ARHGAP18Q8N392 663 aa15.35■□□□□ 0.05
ERCC1-203ENST00000340192 ZNF276Q8N554 614 aa15.35■□□□□ 0.05
ERCC1-203ENST00000340192 ATRIPQ8WXE1 791 aa15.35■□□□□ 0.05
ERCC1-203ENST00000340192 CDK5RAP1Q96SZ6 601 aaKnown RBP15.35■□□□□ 0.05
ERCC1-203ENST00000340192 ULBP1Q9BZM6 244 aa15.35■□□□□ 0.05
ERCC1-203ENST00000340192 LRRC4Q9HBW1 653 aa15.35■□□□□ 0.05
ERCC1-203ENST00000340192 ZSCAN32Q9NX65 697 aa15.35■□□□□ 0.05
ERCC1-203ENST00000340192 CNTN6Q9UQ52 1028 aa15.35■□□□□ 0.05
ERCC1-203ENST00000340192 PCDHGA2Q9Y5H1 932 aa15.35■□□□□ 0.05
ERCC1-203ENST00000340192 GTPBP10A4D1E9 387 aaKnown RBP15.34■□□□□ 0.05
ERCC1-203ENST00000340192 M0QYV0 167 aa15.34■□□□□ 0.05
ERCC1-203ENST00000340192 RNF40O75150 1001 aa15.34■□□□□ 0.05
ERCC1-203ENST00000340192 ADH5P11766 374 aa15.34■□□□□ 0.05
ERCC1-203ENST00000340192 PON1P27169 355 aa15.34■□□□□ 0.05
ERCC1-203ENST00000340192 NRLP54845 237 aa15.34■□□□□ 0.05
ERCC1-203ENST00000340192 MFAP3P55082 362 aa15.34■□□□□ 0.05
ERCC1-203ENST00000340192 YWHAGP61981 247 aaKnown RBP eCLIP15.34■□□□□ 0.05
ERCC1-203ENST00000340192 MIIPQ5JXC2 388 aa15.34■□□□□ 0.05
ERCC1-203ENST00000340192 LY6G5CQ5SRR4 150 aa15.34■□□□□ 0.05
ERCC1-203ENST00000340192 HTR3DQ70Z44 454 aa15.34■□□□□ 0.05
ERCC1-203ENST00000340192 ENOSF1Q7L5Y1 443 aa15.34■□□□□ 0.05
ERCC1-203ENST00000340192 BHLHA9Q7RTU4 235 aa15.34■□□□□ 0.05
ERCC1-203ENST00000340192 MIB1Q86YT6 1006 aa15.34■□□□□ 0.05
ERCC1-203ENST00000340192 ZBTB44Q8NCP5 570 aa15.34■□□□□ 0.05
ERCC1-203ENST00000340192 SLC35F5Q8WV83 523 aa15.34■□□□□ 0.05
ERCC1-203ENST00000340192 KCTD13Q8WZ19 329 aa15.34■□□□□ 0.05
ERCC1-203ENST00000340192 NDRG1Q92597 394 aaKnown RBP15.34■□□□□ 0.05
ERCC1-203ENST00000340192 EZH1Q92800 747 aaPredicted RBP15.34■□□□□ 0.05
ERCC1-203ENST00000340192 SECISBP2LQ93073 1101 aaKnown RBP15.34■□□□□ 0.05
ERCC1-203ENST00000340192 TUBGCP2Q9BSJ2 902 aa15.34■□□□□ 0.05
ERCC1-203ENST00000340192 FAM126AQ9BYI3 521 aaPredicted RBP15.34■□□□□ 0.05
ERCC1-203ENST00000340192 SEMA4AQ9H3S1 761 aa15.34■□□□□ 0.05
ERCC1-203ENST00000340192 APEX2Q9UBZ4 518 aa15.34■□□□□ 0.05
ERCC1-203ENST00000340192 PAPSS2O95340 614 aaPredicted RBP15.33■□□□□ 0.04
ERCC1-203ENST00000340192 LMNAP02545 664 aaKnown RBP15.33■□□□□ 0.04
ERCC1-203ENST00000340192 LCP1P13796 627 aa15.33■□□□□ 0.04
ERCC1-203ENST00000340192 PRKCSHP14314 528 aaPredicted RBP15.33■□□□□ 0.04
ERCC1-203ENST00000340192 SLC6A11P48066 632 aa15.33■□□□□ 0.04
ERCC1-203ENST00000340192 RGS7P49802 495 aa15.33■□□□□ 0.04
ERCC1-203ENST00000340192 EFEMP1Q12805 493 aa15.33■□□□□ 0.04
ERCC1-203ENST00000340192 FBXO43Q4G163 708 aa15.33■□□□□ 0.04
ERCC1-203ENST00000340192 VWA3BQ502W6 1294 aa15.33■□□□□ 0.04
ERCC1-203ENST00000340192 PMF1Q6P1K2 205 aa15.33■□□□□ 0.04
ERCC1-203ENST00000340192 RSRC2Q7L4I2 434 aaKnown RBP15.33■□□□□ 0.04
ERCC1-203ENST00000340192 C12orf40Q86WS4 652 aa15.33■□□□□ 0.04
ERCC1-203ENST00000340192 SIX6OS1Q8N1H7 587 aa15.33■□□□□ 0.04
ERCC1-203ENST00000340192 FAM81BQ96LP2 452 aa15.33■□□□□ 0.04
ERCC1-203ENST00000340192 NDST4Q9H3R1 872 aa15.33■□□□□ 0.04
ERCC1-203ENST00000340192 SPHK2Q9NRA0 654 aa15.33■□□□□ 0.04
ERCC1-203ENST00000340192 SAMSN1Q9NSI8 373 aaKnown RBP15.33■□□□□ 0.04
ERCC1-203ENST00000340192 RASAL2Q9UJF2 1139 aa15.33■□□□□ 0.04
ERCC1-203ENST00000340192 LSM7Q9UK45 103 aaKnown RBP15.33■□□□□ 0.04
ERCC1-203ENST00000340192 CHURC1-FNTBB4DL54 471 aa15.32■□□□□ 0.04
ERCC1-203ENST00000340192 KCNJ18B7U540 433 aa15.32■□□□□ 0.04
ERCC1-203ENST00000340192 K7ESF4 209 aa15.32■□□□□ 0.04
ERCC1-203ENST00000340192 PIK3R2O00459 728 aa15.32■□□□□ 0.04
ERCC1-203ENST00000340192 ATG13O75143 517 aa15.32■□□□□ 0.04
ERCC1-203ENST00000340192 GABBR2O75899 941 aa15.32■□□□□ 0.04
ERCC1-203ENST00000340192 STC2O76061 302 aa15.32■□□□□ 0.04
ERCC1-203ENST00000340192 MBD3O95983 291 aa15.32■□□□□ 0.04
ERCC1-203ENST00000340192 GAD2Q05329 585 aa15.32■□□□□ 0.04
ERCC1-203ENST00000340192 KCNJ12Q14500 433 aa15.32■□□□□ 0.04
ERCC1-203ENST00000340192 ARHGAP44Q17R89 818 aa15.32■□□□□ 0.04
ERCC1-203ENST00000340192 ANO4Q32M45 955 aa15.32■□□□□ 0.04
ERCC1-203ENST00000340192 TMEM25Q86YD3 366 aa15.32■□□□□ 0.04
ERCC1-203ENST00000340192 RPLP0P6Q8NHW5 317 aa15.32■□□□□ 0.04
ERCC1-203ENST00000340192 PNKPQ96T60 521 aa15.32■□□□□ 0.04
ERCC1-203ENST00000340192 CNGB3Q9NQW8 809 aa15.32■□□□□ 0.04
ERCC1-203ENST00000340192 MARCH2Q9P0N8 246 aa15.32■□□□□ 0.04
ERCC1-203ENST00000340192 NFE2L3Q9Y4A8 694 aa15.32■□□□□ 0.04
ERCC1-203ENST00000340192 YJEFN3A6XGL0 299 aa15.31■□□□□ 0.04
ERCC1-203ENST00000340192 BECN2A8MW95 431 aa15.31■□□□□ 0.04
ERCC1-203ENST00000340192 E7ENQ6 273 aa15.31■□□□□ 0.04
ERCC1-203ENST00000340192 K7EQS6 105 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms