RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 CHRNB2P17787 502 aa13.48□□□□□ -0.25
SRSF3-201ENST00000339436 GPC5P78333 572 aa13.48□□□□□ -0.25
SRSF3-201ENST00000339436 MTF1Q14872 753 aa13.48□□□□□ -0.25
SRSF3-201ENST00000339436 TRIM72Q6ZMU5 477 aa13.48□□□□□ -0.25
SRSF3-201ENST00000339436 TADA2BQ86TJ2 420 aa13.48□□□□□ -0.25
SRSF3-201ENST00000339436 SH3RF2Q8TEC5 729 aa13.48□□□□□ -0.25
SRSF3-201ENST00000339436 IPO4Q8TEX9 1081 aaKnown RBP13.48□□□□□ -0.25
SRSF3-201ENST00000339436 EDAQ92838 391 aa13.48□□□□□ -0.25
SRSF3-201ENST00000339436 PPP1R13BQ96KQ4 1090 aa13.48□□□□□ -0.25
SRSF3-201ENST00000339436 MIS12Q9H081 205 aa13.48□□□□□ -0.25
SRSF3-201ENST00000339436 WDFY4Q6ZS81 3184 aa13.47□□□□□ -0.25
SRSF3-201ENST00000339436 LEFTY2O00292 366 aa13.47□□□□□ -0.25
SRSF3-201ENST00000339436 MDM4O15151 490 aa13.47□□□□□ -0.25
SRSF3-201ENST00000339436 AP5Z1O43299 807 aa13.47□□□□□ -0.25
SRSF3-201ENST00000339436 TBX18O95935 607 aa13.47□□□□□ -0.25
SRSF3-201ENST00000339436 GDI1P31150 447 aa13.47□□□□□ -0.25
SRSF3-201ENST00000339436 ATP5C1P36542 298 aaKnown RBP13.47□□□□□ -0.25
SRSF3-201ENST00000339436 SIGLEC14Q08ET2 396 aa13.47□□□□□ -0.25
SRSF3-201ENST00000339436 ASIC2Q16515 512 aa13.47□□□□□ -0.25
SRSF3-201ENST00000339436 C10orf120Q5SQS8 335 aa13.47□□□□□ -0.25
SRSF3-201ENST00000339436 SFMBT2Q5VUG0 894 aa13.47□□□□□ -0.25
SRSF3-201ENST00000339436 NAA35Q5VZE5 725 aa13.47□□□□□ -0.25
SRSF3-201ENST00000339436 BSPRYQ5W0U4 402 aa13.47□□□□□ -0.25
SRSF3-201ENST00000339436 SPECC1LQ69YQ0 1117 aa13.47□□□□□ -0.25
SRSF3-201ENST00000339436 HFE2Q6ZVN8 426 aa13.47□□□□□ -0.25
SRSF3-201ENST00000339436 IRF2BP2Q7Z5L9 587 aa13.47□□□□□ -0.25
SRSF3-201ENST00000339436 DDX42Q86XP3 938 aaKnown RBP eCLIP13.47□□□□□ -0.25
SRSF3-201ENST00000339436 VSTM4Q8IW00 320 aa13.47□□□□□ -0.25
SRSF3-201ENST00000339436 SCUBE3Q8IX30 993 aa13.47□□□□□ -0.25
SRSF3-201ENST00000339436 YAF2Q8IY57 180 aa13.47□□□□□ -0.25
SRSF3-201ENST00000339436 DNASE1L2Q92874 299 aa13.47□□□□□ -0.25
SRSF3-201ENST00000339436 ASIC4Q96FT7 647 aa13.47□□□□□ -0.25
SRSF3-201ENST00000339436 PIWIL1Q96J94 861 aaKnown RBP13.47□□□□□ -0.25
SRSF3-201ENST00000339436 SYT11Q9BT88 431 aa13.47□□□□□ -0.25
SRSF3-201ENST00000339436 BRD9Q9H8M2 597 aa13.47□□□□□ -0.25
SRSF3-201ENST00000339436 AIPL1Q9NZN9 384 aa13.47□□□□□ -0.25
SRSF3-201ENST00000339436 DNMT3LQ9UJW3 386 aa13.47□□□□□ -0.25
SRSF3-201ENST00000339436 NUDT5Q9UKK9 219 aa13.47□□□□□ -0.25
SRSF3-201ENST00000339436 KMT2EQ8IZD2 1858 aa13.47□□□□□ -0.25
SRSF3-201ENST00000339436 ZNF263O14978 683 aa13.46□□□□□ -0.25
SRSF3-201ENST00000339436 CHADO15335 359 aa13.46□□□□□ -0.25
SRSF3-201ENST00000339436 LTFP02788 710 aa13.46□□□□□ -0.25
SRSF3-201ENST00000339436 ERBB2P04626 1255 aa13.46□□□□□ -0.25
SRSF3-201ENST00000339436 CYP1A1P04798 512 aaPredicted RBP13.46□□□□□ -0.25
SRSF3-201ENST00000339436 PRKCIP41743 596 aa13.46□□□□□ -0.25
SRSF3-201ENST00000339436 PLCB2Q00722 1185 aa13.46□□□□□ -0.25
SRSF3-201ENST00000339436 PFKPQ01813 784 aa13.46□□□□□ -0.25
SRSF3-201ENST00000339436 TRIM14Q14142 442 aa13.46□□□□□ -0.25
SRSF3-201ENST00000339436 ARHGAP29Q52LW3 1261 aa13.46□□□□□ -0.25
SRSF3-201ENST00000339436 BTBD8Q5XKL5 378 aa13.46□□□□□ -0.25
SRSF3-201ENST00000339436 RSRC2Q7L4I2 434 aaKnown RBP13.46□□□□□ -0.25
SRSF3-201ENST00000339436 KIAA1958Q8N8K9 716 aa13.46□□□□□ -0.25
SRSF3-201ENST00000339436 OLIG1Q8TAK6 271 aa13.46□□□□□ -0.25
SRSF3-201ENST00000339436 IRF7Q92985 503 aa13.46□□□□□ -0.25
SRSF3-201ENST00000339436 FAM149B1Q96BN6 582 aa13.46□□□□□ -0.25
SRSF3-201ENST00000339436 ZFYVE19Q96K21 471 aa13.46□□□□□ -0.25
SRSF3-201ENST00000339436 NUCKS1Q9H1E3 243 aaKnown RBP13.46□□□□□ -0.25
SRSF3-201ENST00000339436 EPHX3Q9H6B9 360 aa13.46□□□□□ -0.25
SRSF3-201ENST00000339436 SYNCQ9H7C4 482 aa13.46□□□□□ -0.25
SRSF3-201ENST00000339436 ABCC13Q9NSE7 274 aa13.46□□□□□ -0.25
SRSF3-201ENST00000339436 CFAP97Q9P2B7 532 aa13.46□□□□□ -0.25
SRSF3-201ENST00000339436 CAPN11Q9UMQ6 739 aa13.46□□□□□ -0.25
SRSF3-201ENST00000339436 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.46□□□□□ -0.253e-10■■□□□ 14.5
SRSF3-201ENST00000339436 UNGP13051 313 aaPredicted RBP13.45□□□□□ -0.26
SRSF3-201ENST00000339436 SNX16P57768 344 aa13.45□□□□□ -0.26
SRSF3-201ENST00000339436 ZBED6P86452 979 aa13.45□□□□□ -0.26
SRSF3-201ENST00000339436 CENPCQ03188 943 aa13.45□□□□□ -0.26
SRSF3-201ENST00000339436 CC2D1AQ6P1N0 951 aaPredicted RBP13.45□□□□□ -0.26
SRSF3-201ENST00000339436 MSANTD2Q6P1R3 559 aa13.45□□□□□ -0.26
SRSF3-201ENST00000339436 OLFML1Q6UWY5 402 aa13.45□□□□□ -0.26
SRSF3-201ENST00000339436 TRIM67Q6ZTA4 783 aa13.45□□□□□ -0.26
SRSF3-201ENST00000339436 FAM183BPQ6ZVS7 135 aa13.45□□□□□ -0.26
SRSF3-201ENST00000339436 MIB1Q86YT6 1006 aa13.45□□□□□ -0.26
SRSF3-201ENST00000339436 MSANTD4Q8NCY6 345 aa13.45□□□□□ -0.26
SRSF3-201ENST00000339436 TTC16Q8NEE8 873 aa13.45□□□□□ -0.26
SRSF3-201ENST00000339436 ZNF397Q8NF99 534 aaPredicted RBP13.45□□□□□ -0.26
SRSF3-201ENST00000339436 EDEM1Q92611 657 aa13.45□□□□□ -0.26
SRSF3-201ENST00000339436 SYN2Q92777 582 aaPredicted RBP13.45□□□□□ -0.26
SRSF3-201ENST00000339436 GOLGA1Q92805 767 aa13.45□□□□□ -0.26
SRSF3-201ENST00000339436 PCDHB18PQ96TA0 734 aa13.45□□□□□ -0.26
SRSF3-201ENST00000339436 AGPAT1Q99943 283 aa13.45□□□□□ -0.26
SRSF3-201ENST00000339436 FAM83CQ9BQN1 747 aa13.45□□□□□ -0.26
SRSF3-201ENST00000339436 TRIM62Q9BVG3 475 aa13.45□□□□□ -0.26
SRSF3-201ENST00000339436 KLF16Q9BXK1 252 aaPredicted RBP13.45□□□□□ -0.26
SRSF3-201ENST00000339436 TRIM5Q9C035 493 aa13.45□□□□□ -0.26
SRSF3-201ENST00000339436 TRPV5Q9NQA5 729 aa13.45□□□□□ -0.26
SRSF3-201ENST00000339436 OLA1Q9NTK5 396 aaKnown RBP13.45□□□□□ -0.26
SRSF3-201ENST00000339436 THG1LQ9NWX6 298 aaKnown RBP13.45□□□□□ -0.26
SRSF3-201ENST00000339436 MARCH2Q9P0N8 246 aa13.45□□□□□ -0.26
SRSF3-201ENST00000339436 RASAL2Q9UJF2 1139 aa13.45□□□□□ -0.26
SRSF3-201ENST00000339436 ATG2BQ96BY7 2078 aa13.45□□□□□ -0.26
SRSF3-201ENST00000339436 MYO18AQ92614 2054 aaKnown RBP13.44□□□□□ -0.26
SRSF3-201ENST00000339436 FAM170AA1A519 330 aa13.44□□□□□ -0.26
SRSF3-201ENST00000339436 FYNP06241 537 aa13.44□□□□□ -0.26
SRSF3-201ENST00000339436 GABRB2P47870 512 aa13.44□□□□□ -0.26
SRSF3-201ENST00000339436 GOLGA8FQ08AF8 430 aa13.44□□□□□ -0.26
SRSF3-201ENST00000339436 GOLGA8DPQ0D2H9 430 aa13.44□□□□□ -0.26
SRSF3-201ENST00000339436 EFEMP1Q12805 493 aa13.44□□□□□ -0.26
SRSF3-201ENST00000339436 CLEC16AQ2KHT3 1053 aa13.44□□□□□ -0.26
SRSF3-201ENST00000339436 TOGARAM2Q6ZUX3 1019 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms